LOCUS AK022748 2253 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ12686 fis, clone NT2RM4002527, weakly similar
to VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1.
ACCESSION AK022748
VERSION AK022748.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2253)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2253
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RM4002527"
/clone_lib="NT2RM4"
/db_xref="H-InvDB:HIT000006022"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from uninduced NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 31..>2253
/codon_start=1
/protein_id="BAB14222.1"
/translation="MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPG
AGESPGTPPFRVIGELVGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVV
TEHALHQHTISTLHWSPRVKDLIVSGDEKGVVFCYWFNRNDSQHLFIEPRTIFCLTCS
PHHEDLVAIGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEE
TSEEAEITNGNAVAQAPVTKGCYLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGG
IDPTVKERLWLTLHWPSNQPTQPVSSCFGGELLQWDLTQSWRRKYTLFSASSEGQNHS
RIVFNLCPLQTEDDKQLLLSTSMDRDVKCWDIATLECSWTLPSLGGFAYSLAFSSVDI
GSLAIGVGDGMIRVWNTLSIKNNYDVKNFWQGVKSKVTALCWHPTKEGCLAFGTDDGK
VGLYDAYSNKPPQISSTYHKKTVYTLAWGPPVPPMSLGGEGDRPSLALYSCGGEGIVL
QHNPWKLSGEAFDINKLIRDTNSIKYKLPVHTEISWKADGKIMALGNEDGSIEIFQIP
NLKLICTIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIESSPES
PVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASYDGTAQVWDALREEPLCNFRGHQ
GRLLCVAWSPLDPDCIYSGADDFCVHKWLTSMQDHSRPPQGKKSIELEKKRLSQPKAK
P"
BASE COUNT 613 a 533 c 554 g 553 t
ORIGIN
1 ctcttctctt gtctctgacg gcttgtagtt atggggcagg agccgcggac gctgccgccc
61 tcccccaact ggtactgcgc ccgctgcagc gatgccgtgc ccgggggcct ctttggcttc
121 gccgcgcgga cctccgtctt ccttgtccgc gtgggcccgg gcgcaggcga gagtccaggg
181 acacccccgt ttcgagtcat aggagagttg gtgggacaca ccgaaagggt ctctggcttc
241 acattttctc atcaccctgg tcagtacaac ctctgtgcca ccagctccga cgatgggact
301 gtgaaaatat gggatgtaga gacaaaaaca gttgtgacag aacatgcact ccatcagcat
361 acgatatcaa cactacattg gtctcctcga gtaaaggact taatagtatc tggggatgaa
421 aaaggagtag ttttctgtta ctggtttaac agaaatgaca gccagcacct ctttatagaa
481 cccaggacaa ttttctgtct tacttgttca cctcatcatg aagatttagt agccattggc
541 tacaaggatg gcatagtggt gataattgac atcagtaaga aaggagaggt tattcatagg
601 cttcgaggcc atgatgatga aatccactcc atagcctggt gtcccctgcc tggtgaagat
661 tgtttatcta taaaccaaga ggaaacttca gaagaagctg aaattaccaa cgggaatgct
721 gtagcacaag ctccagtaac aaaaggttgc tacttagcca ctggaagcaa agatcaaacc
781 attcgaatct ggagctgttc tagaggccga ggggtgatga ttttgaaatt gccctttctg
841 aagagaagag gagggggtat agacccaact gttaaagagc gcctttggtt gacactccat
901 tggcccagca atcaaccaac acagccggta tctagctgtt ttggaggtga actgttgcaa
961 tgggatctca ctcaatcttg gagacggaaa tacaccctct tcagtgcctc atcagaaggg
1021 caaaatcatt caagaattgt gtttaattta tgtcctttac aaacagagga tgacaaacag
1081 ctgttacttt ctacatcaat ggatagagat gtaaaatgtt gggacatagc caccttggag
1141 tgcagctgga cccttccttc ccttggtggg tttgcataca gcctggcttt ctcttctgtg
1201 gacataggct ctttggccat aggtgttggg gatggcatga tccgtgtatg gaatacactc
1261 tccataaaga acaactatga tgtgaaaaat ttttggcaag gcgtgaagtc caaggttaca
1321 gcgctgtgct ggcacccaac caaggaaggt tgcttagctt ttggaactga tgatggaaaa
1381 gtgggattgt atgacgccta ctccaacaag cctccacaga tttctagcac atatcataag
1441 aagactgtat atacgttagc ctgggggcca ccagtacccc ccatgtcact tggaggagaa
1501 ggagacagac cttcccttgc tttatacagc tgtggaggag aagggattgt cttacagcat
1561 aatccctgga agcttagtgg agaagccttt gacatcaaca aactcatcag ggacaccaat
1621 tcaatcaaat acaaattgcc tgtacacaca gagataagtt ggaaagcaga tggcaaaatc
1681 atggctcttg gcaatgaaga tggatcaata gaaatatttc agattcccaa cctgaaactg
1741 atctgtacta tccaacagca tcacaagctt gtgaatacca ttagctggca tcatgagcat
1801 ggcagccagc cagaattgag ctatctgatg gcctctggct ccaacaatgc agtcatttac
1861 gtgcacaacc tgaagactgt catagagagc agccctgagt ctccagtgac cattacagag
1921 ccctaccgga ccctctcagg gcatacggcc aagattacca gtgtggcgtg gagcccacat
1981 catgatggaa ggctggtatc tgcttcctat gatggtacag cccaggtgtg ggatgctctc
2041 cgggaagagc ccctgtgcaa tttccgagga catcaaggtc gactgctttg tgtggcatgg
2101 tctcctttgg atccagactg catctattca ggggcagatg acttttgtgt gcacaagtgg
2161 ctcacttcca tgcaagatca ttcccggcct cctcaaggca aaaaaagtat tgaattggag
2221 aaaaaacggc tctctcaacc taaggcaaag ccc
//