LOCUS AK022709 2474 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ12647 fis, clone NT2RM4002013, weakly similar
to HYPOTHETICAL 89.4 KD TRP-ASP REPEATS CONTAINING PROTEIN IN
PMT6-PCT1 INTERGENIC REGION.
ACCESSION AK022709
VERSION AK022709.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2474)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2474
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RM4002013"
/clone_lib="NT2RM4"
/db_xref="H-InvDB:HIT000005983"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from uninduced NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 65..2467
/codon_start=1
/protein_id="BAB14193.1"
/translation="MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYD
PLKRVVVTNLNGHTARVNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVH
LQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVRLWSKKGPEVPILACGNDDCR
IHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTS
LETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQ
QPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHA
FHGALHLWKQNTVNPGEWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPW
KRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCA
ITGQSLNHVLCNQDSDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQ
VAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNSSKTLLASACKAAKKE
HAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRDRTWSLWKKQDTISPE
FEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGVCDSTDDCIEH
NIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDW
THCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKC
AL"
BASE COUNT 692 a 484 c 605 g 693 t
ORIGIN
1 gaaaccatgg tcaggtggtc tcttacctgt taaaatcagg agctgacaaa gaaaagttgg
61 cgacatggtg gcacccgtgc tggagacttc tcacgtgttt tgctgcccaa accgggtgcg
121 gggagtcctg aactggagct ctgggcccag aggacttctg gcctttggca cgtcctgctc
181 cgtggtgctc tatgaccccc tgaaaagggt tgttgttacc aacttgaatg gtcacaccgc
241 ccgagtcaat tgcatacagt ggatttgtaa acaggatggc tccccttcta ctgaattagt
301 ttctggagga tctgataatc aagtgattca ctgggaaata gaggataatc agcttttaaa
361 agcagtgcat cttcaaggcc atgaaggacc tgtttatgcg gtgcatgctg tttaccagag
421 gaggacatca gatcctgcat tatgtacact gatcgtttct gcagctgcag attctgctgt
481 tcgactctgg tctaaaaagg gtccagaagt accaatatta gcatgtggca atgatgattg
541 cagaattcac atatttgctc aacaaaatga tcagtttcag aaagtgcttt ctctctgtgg
601 acatgaggat tggattagag gagtggaatg ggcagccttt ggtagagatc ttttcctagc
661 aagctgttca caagattgcc tgataagaat atggaagctg tatataaagt caacatcttt
721 agaaactcag gatgacgata acataagact gaaagaaaat acttttacca tagaaaatga
781 aagtgttaaa atagcatttg ctgttactct ggagacagtg ctagccggtc atgaaaactg
841 ggtaaatgca gttcactggc aacctgtgtt ttacaaagat ggtgtcctac agcagccagt
901 gagattatta tctgcttcca tggataaaac catgattctc tgggctccag atgaagagtc
961 aggagtttgg ctagaacagg ttcgagtagg tgaagtaggt gggaatactt tgggatttta
1021 tgattgccag ttcaatgaag atggctccat gatcattgct catgctttcc acggagcgtt
1081 gcacctttgg aaacagaata cagttaaccc aggagagtgg actccagaga ttgtcatttc
1141 aggacacttt gatggtgtcc aagacctagt ctgggatcca gaaggagaat ttattatcac
1201 tgttggtact gatcagacaa ctagactttt tgctccatgg aagagaaaag accaatcaca
1261 ggtgacttgg catgaaattg caaggcctca gatacatggg tatgacctga aatgtttggc
1321 aatgattaat cggtttcagt ttgtatctgg agcagatgaa aaagttcttc gggttttttc
1381 tgcacctcgg aattttgtgg aaaatttttg tgccattaca ggacaatcac tgaatcatgt
1441 gctctgtaat caagatagtg atcttccaga aggagccact gtccctgcat tgggattatc
1501 aaataaagct gtctttcagg gagatatagc ttctcagcct tctgatgaag aggagctgtt
1561 aactagtact ggttttgagt atcagcaggt ggcctttcag ccctccatac ttactgagcc
1621 tcccactgag gatcatcttc tgcagaatac tttgtggcct gaagttcaaa aactatatgg
1681 gcacggttat gaaatatttt gtgttacttg taacagttca aagactctgc ttgcctcagc
1741 ttgtaaggca gctaagaaag agcatgcagc tatcattctt tggaacacta catcttggaa
1801 acaggtgcag aatttagttt tccacagttt gacagtcacg cagatggcct tctcacctaa
1861 tgagaagttc ttactagctg tttccagaga tcgaacctgg tcattgtgga aaaagcagga
1921 tacaatctca cctgagttcg agccagtttt tagtcttttt gccttcacca acaaaattac
1981 ttctgtgcac agtagaatta tttggtcttg tgattggagt cctgacagca agtatttctt
2041 cactgggagt cgagacaaaa aggtggttgt ctggggtgtg tgcgactcca ctgatgactg
2101 tattgagcac aacattggcc cctgctcctc agtcctggac gtgggtgggg ctgtgacagc
2161 tgtcagcgtc tgcccagtgc tccacccttc tcaacgatac gtggttgcag taggattgga
2221 gtgtggaaag atttgcttat atacctggaa aaagactgat caagttccag aaataaatga
2281 ctggacccac tgtgtagaaa caagtcaaag ccaaagtcat acactggcta tcagaaaatt
2341 atgctggaag aattgcagtg gaaaaactga acagaaggaa gcagaaggtg ctgagtggtt
2401 acactttgca agctgtggtg aagatcacac tgtgaagata cacagagtca ataaatgtgc
2461 actgtaatgg actt
//