LOCUS AK022269 1890 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ12207 fis, clone MAMMA1000956, highly similar
to Claudin-8.
ACCESSION AK022269
VERSION AK022269.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1890)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sato,H., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..1890
/clone="MAMMA1000956"
/clone_lib="MAMMA1"
/db_xref="H-InvDB:HIT000005543"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="Mammary gland"
CDS 150..851
/codon_start=1
/note="highly similar to Claudin-8"
/protein_id="BAG51070.1"
/translation="MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFE
NFWEGLWMNCVRQANIRMQCKIYDSLLALSPDLQAARGLMCAASVMPFLAFMMAILGM
KCTRCTGDNEKVKAHILLTAGIIFIITGMVVLIPVSWVANAIIRDFYNPIVNVAQKRE
LGEALYLGWTTALVLIVGGALFCCVFCCNEKSSSYRYSIPSHRTTQKSYHTGKKSRLL
QKSVCVVVYVFLTLL"
misc_feature 795^796
/note="5 bases segment is present in AJ250711 ,
AP001707.1 and AP000884.1."
BASE COUNT 565 a 341 c 384 g 600 t
ORIGIN
1 aagcaaagca gctcttattt gaaaaaccac tgggttccga gttcattact acaggaaaaa
61 ctgttctctt ctgtggcaca gagaaccctg cttcaaagca gaagtagcag ttccggagtc
121 cagctggcta aaactcatcc cagaggataa tggcaaccca tgccttagaa atcgctgggc
181 tgtttcttgg tggtgttgga atggtgggca cagtggctgt cactgtcatg cctcagtgga
241 gagtgtcggc cttcattgaa aacaacatcg tggtttttga aaacttctgg gaaggactgt
301 ggatgaattg cgtgaggcag gctaacatca ggatgcagtg caaaatctat gattccctgc
361 tggctctttc tccggaccta caggcagcca gaggactgat gtgtgctgct tccgtgatgc
421 ccttcttggc tttcatgatg gccatccttg gcatgaaatg caccaggtgc acgggggaca
481 atgagaaggt gaaggctcac attctgctga cggctggaat catcttcatc atcacgggca
541 tggtggtgct catccctgtg agctgggttg ccaatgccat catcagagat ttctataacc
601 caatagtgaa tgttgcccaa aaacgtgagc ttggagaagc tctctactta ggatggacca
661 cggcactggt gctgattgtt ggaggagctc tgttctgctg cgttttttgt tgcaacgaaa
721 agagcagtag ctacagatac tcgatacctt cccatcgcac aacccaaaaa agttatcaca
781 ccggaaagaa gtcacgtcta ctccagaagt cagtatgtgt agttgtgtat gtctttttaa
841 ctttactata aagccatgca aatgacaaaa atctatatta ctttctcaaa atggacccca
901 aagaaacttt gatttactgt tcttaactgc ctaatcttaa ttacaggaac tgtgcatcag
961 ctatttatga ttctataagc tatttcagca gaatgagata ttaaatccaa tgctttgatt
1021 gttctagaaa gtatagtaat ttgttttcta aggtggttca agcatctact ctttttatca
1081 tttacttcaa aatgacattg ctaaagactg cattatttta ctactgtaat ttctccacga
1141 catagcatta tgtacataga tgagtgtaac atttatatct cacatagaga catgcttata
1201 tggttttatt taaaatgaaa tgccagtcca ttacactgaa taaatagaac tcaactattg
1261 cttttcaggg aaatcatgga tagggttgaa gaaggttact attaattgtt taaaaacagc
1321 ttagggatta atgtcctcca tttataatga agattaaaat gaaggcttta atcagcattg
1381 taaaggaaat tgaatggctt tctgatatgc tgttttttag cctaggagtt agaaatccta
1441 acttctttat cctcttctcc cagaggcttt tttttttctt gtgtattaaa ttaacatttt
1501 taaaaagcag atattttgtc aaggggcttt gcattcaaac tgcttttcca gggctatact
1561 cagaagaaag ataaaagtgt gatctaagaa aaagtgatgg ttttaggaaa gtgaaaatat
1621 ttttgttttt gtatttgaag aagaatgatg cattttgaca agaaatcata tatgtatgga
1681 tatattttaa taagtatttg agtacagact ttgaggtttc atcaatataa ataaaagagc
1741 agaaaaatat gtcttggttt tcatttgctt accaaaaaaa caacaacaaa aaaagttgtc
1801 ctttgagaac ttcacctgct cctatgtggg tacctgagtc aaaattgtca tttttgttct
1861 gtgaaaaata aatttccttc ttgtaccatt
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