LOCUS AK021944 2303 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ11882 fis, clone HEMBA1007151, highly similar
to Synphilin-1.
ACCESSION AK021944
VERSION AK021944.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2303)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H.,
Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K.,
Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2303
/clone="HEMBA1007151"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000005218"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 438..1745
/codon_start=1
/note="highly similar to Synphilin-1"
/protein_id="BAG51060.1"
/translation="MQNHAGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQ
LKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDDSVAK
SKPGVQEGIQVLGSLSASSRARPKAKDEHSDKILRQLLGKEISENVCTQEKLSLEFQD
AQASSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKTTPVRKADRPRPQ
PIVESVESMDSAESLHLMIKKHTLASGGRRFPFSIKASKSLDGHSPSPTSESSEPDLE
SQYPGSGSIPPNQPSGDPQQPSPDSTAAQKVATSPKSALKSPSSKRRTSQNLKLRVTF
EEPVVQMEQPSLELNGEKDKDKGRTLQRTSTSNESGDQLKRPFGAFRSIMETLSGNQN
NNNNYQAANQLKTSTLPLTSLGRKTDAKGNPASSASKGKNKAA"
BASE COUNT 703 a 566 c 502 g 532 t
ORIGIN
1 gaccaaatcc agttactaga gcccaagcaa atgagaacag gtaagattcc agtctccccc
61 tcttacaggc atctctgact atgagtgatt ctcttggagc ccaaccatga caagagacag
121 aactccccac cacaaagact gcactgcata tctcataaag gagagcacac tatggacagc
181 ctcctcctct ccttcccagc cccctcctta tgtgggctgc agatgagcat tgatagtagt
241 aggactggct ctgctacatc atcatagact ctgaagggag gtgtgtgata ttgattgctg
301 aaaggtccct agaggctctc ttcatactat tcaacattct gttacagtca ttaaaaaata
361 atgtgtacag agatgtcctg atacacatgt ccttcatttt ctgacagacc ttggttgaat
421 atggagcaaa tgtcaccatg cagaaccacg ctggggaaaa gccctcccag agcgccgagc
481 ggcaggggca caccctgtgc tccaggtacc tggtggtggt ggagacctgc atgtcgctgg
541 cctctcaagt ggtgaagtta accaagcagc taaaggaaca aacagtagaa cgtgtcacgc
601 tgcagaacca actccaacaa tttctagaag cccagaaatc agagggcaag tcactccctt
661 cttcacccag ttcaccatcc tcacctgcct ccagaaagtc ccagtggaaa tctccagatg
721 cagatgatga ttctgtagcc aaaagcaagc caggagtcca agaggggatt caggttcttg
781 gaagcctgtc agcctccagc cgggctagac ccaaagcaaa agatgaacat tctgataaaa
841 tcttacgcca gttattggga aaggaaatct cagaaaatgt ctgcacccag gaaaaactgt
901 ccttggaatt ccaggatgct caggcttcct ctagaaattc taaaaagatc ccactggaga
961 agagggaact gaagttagcc aggctgagac agctgatgca gaggtcactg agtgagtctg
1021 acacagactc caacaactct gaggacccca agactacccc agtgaggaag gctgaccgac
1081 caaggccgca gcccattgta gaaagcgtag agagtatgga cagcgcagaa agcctgcacc
1141 tgatgattaa gaaacacacc ttggcatcag ggggacgcag gtttcctttc agcatcaagg
1201 cctccaaatc cctggatggc cacagcccat ctcccacctc agagagcagc gaaccagact
1261 tagaatccca gtatccaggc tcagggagta ttcctccaaa ccagccctct ggtgaccctc
1321 agcagcccag ccctgacagt actgctgccc agaaagttgc cacaagtccc aagagtgccc
1381 tcaagtctcc atcttccaag cgtaggacat ctcagaactt aaaactgaga gttacctttg
1441 aggagcctgt ggtgcagatg gagcagccta gccttgaact gaatggagaa aaagacaaag
1501 ataagggcag gactctccag cggacctcca caagtaacga atcgggggat caactgaaaa
1561 ggccttttgg agcctttcga tctatcatgg agacactaag tggcaaccaa aacaataata
1621 ataactacca ggcagccaac cagctgaaaa cctctacatt gcccttgacc tcacttggga
1681 ggaagacaga tgccaaggga aaccctgcca gctccgctag caaaggaaag aataaggcag
1741 cataatgaca tcaatagaaa aatgaagaaa tcctacagca taaagcacat tgctgagcca
1801 gagtcaaaag aactcttctt gtaaatcact ttttaaattt tctctcactg atgccctttg
1861 gaaattattg gaaatttctg gactatcctc tttggaaaga gaaccatgaa aacaatgcct
1921 caccagcaga agaacagaat atcaggatgc cttaaattta tagtagtaga ctgtaaaaga
1981 ttcattttgg ggtgatatct gtatatataa cttgtttttt taaaagatgc cgtttaaaag
2041 catgattggg aaaatgtatg ttttttaaga gtagattgat tcaccctacc cacaggacat
2101 tcaccaagcc actgatacca ttttatattt catcaattgc atgagtattt gctaatgttg
2161 attgaacctc cctttcccca taatgtgggc agatttggct cagctccttc atgagatcag
2221 gtcagtggta ttgtttctgt caagagtgtt ttttctgtca tttctacttt ttgtataaag
2281 gaaataaaac aatgttaaca gcc
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