LOCUS AK002170 2019 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ11308 fis, clone PLACE1010074, highly similar
to Sorting nexin-2.
ACCESSION AK002170
VERSION AK002170.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2019)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2019
/clone="PLACE1010074"
/clone_lib="PLACE1"
/db_xref="H-InvDB:HIT000004644"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 5..1564
/codon_start=1
/note="highly similar to Sorting nexin-2"
/protein_id="BAG51023.1"
/translation="MAAEREPPPLGDGKPTDFEDLEDGEDLFTSTVSTLESSPSSPEP
ASLPAEDISANSNGPKPTEVVLDDDREDLFAEATEEVSLDSPEREPILSSEPSPAVTP
VTPTTLIAPRIESKSMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYM
AYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTK
VKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQAL
SGAGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRELHVSVEALVCHR
KELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSEL
LSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEI
REWEAKVQQGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYW
EAFLPEAKAIA"
BASE COUNT 671 a 383 c 428 g 537 t
ORIGIN
1 gaagatggcg gccgagaggg aacctcctcc gctgggggac gggaagccca ccgactttga
61 ggatctggag gacggagagg acctgttcac cagcactgtc tccaccctag agtcaagtcc
121 atcatctcca gaaccagcta gtcttcctgc agaagatatt agtgcaaact ccaatggccc
181 aaaacccaca gaagttgtat tagatgatga cagagaagat ctttttgcag aagccacaga
241 agaagtttct ttggacagcc ctgaaaggga acctatccta tcctcggaac cttctcctgc
301 agtcacacct gtcactccta ctacactcat tgctcctaga attgaatcaa agagtatgtc
361 tgctcccgtg atctttgata gatccaggga agagattgaa gaagaagcaa atggagacat
421 ttttgacata gaaattggtg tatcagatcc agaaaaagtt ggtgatggca tgaatgccta
481 tatggcatat agagtaacaa caaagacatc tctttccatg ttcagtaaga gtgaattttc
541 agtgaaaaga agattcagcg actttcttgg tttgcacagc aaattagcaa gcaaatattt
601 acatgttggt tatattgtgc caccagctcc agaaaagagt atagtaggga tgaccaaggt
661 caaagtgggt aaagaagact catcatccac tgagtttgta gaaaaacgga gagcagctct
721 tgaaaggtat cttcaaagaa cagtaaaaca tccaacttta ctacaggatc ctgatttaag
781 gcagttcttg gaaagttcag agctgcctag agcagttaat acacaggctc tgagtggagc
841 aggaatattg aggatggtga acaaggctgc cgacgctgtc aacaaaatga caatcaagat
901 gaatgaatcg gatgcatggt ttgaagaaaa gcagcagcaa tttgagaatc tggatcagca
961 acttagggaa cttcatgtca gtgttgaagc cttggtctgt catagaaaag aactttcagc
1021 caacacagct gcctttgcta aaagtgctgc catgttaggt aattctgagg atcatactgc
1081 tttatctaga gctttgtctc agcttgcaga ggttgaggag aagatagacc agttacatca
1141 agaacaagct tttgctgact tttatatgtt ttcagaacta cttagtgact acattcgtct
1201 tattgctgca gtgaaaggtg tgtttgacca tcgaatgaag tgctggcaga aatgggaaga
1261 tgctcaaatt actttgctca aaaaacgtga agctgaagca aaaatgatgg ttgctaacaa
1321 accagataaa atacagcaag ctaaaaatga aataagagag tgggaggcga aagtgcaaca
1381 aggggaaaga gattttgaac agatatctaa aacgattcga aaagaagtgg gaagatttga
1441 gaaagaacga gtgaaggact ttaaaaccgt tatcatcaag tacttagaat cactagttca
1501 aacacaacaa cagctgataa aatactggga agcattccta cctgaagcca aagccattgc
1561 ctagcaataa gattgttgcc gttaagaaga ccttggatgt tgttccagtt atgctggatt
1621 ccacagtgaa atcatttaaa accatctaaa taaaccacta tatattttat gaattacatg
1681 tggttttata tacacacaca cacacacaca cacacacaca cacactctga cattttatta
1741 caagctgcat gtcctgaccc tctttgaatt aagtggactg tggcatgaca ttctgcaata
1801 ctttgctgaa ttgaacacta ttgtgtctta aatacttgca ctaaatagtg cactgcaaga
1861 ccagaaaatt ttacaatatt ttttctttac aatatgttct gtagtatgtt taccctcttt
1921 atgaagtgaa ttaccaatgc tttgaataat gttcacttat acattcctgt acagaaatta
1981 cgattttgtg attacagtaa taaaatgata ttccttgtg
//