LOCUS AK002035 2366 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ11173 fis, clone PLACE1007346, highly similar
to Tripartite motif-containing protein 16.
ACCESSION AK002035
VERSION AK002035.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2366)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2366
/clone="PLACE1007346"
/clone_lib="PLACE1"
/db_xref="H-InvDB:HIT000004509"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 24..1718
/codon_start=1
/note="highly similar to Tripartite motif-containing
protein 16"
/protein_id="BAG51004.1"
/translation="MAELDLMAPGPLPRATAQPPAPLSPDSGSPSPDSGSASPVEEED
VGSSEKLGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRRVKAVKSCLTCMVNYCE
EHLQPHQVNIKLQSHLLTDPVKDHNWRYCPAHHSPLSAFCCPDQQCICQDCCQEHSGH
TIVSLDAARRDKEAELQCTQLDLERKLKLNENAISRLQANQKSVLVSVSEVKAVAEMQ
FGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELERMAAIS
NTVQFLEEYCKFKNTEDITFPSVYVGLKDKLSGIRKVITESTVHLIQLLENYKKKLQE
FSKEEEYDIRTQVSAVVQRKYWTSKPEPSTREQFLQYAYDITFDPDTAHKYLRLQEEN
RKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYLHRYYFEVEIFGAGTYVGLTCKGID
RKGEERNSCISGNNFSWSLQWNGKEFTAWYSDMETPLKAGPFWRLGVYIDFPGGILSF
YGVEYDTMTLVHKFACKFSEPVYAAFWLSKKENAIRIVDLGEEPEKPAPSLVGTAP"
BASE COUNT 570 a 626 c 639 g 531 t
ORIGIN
1 agcctaggag cagagcctcc cagatggctg agttggatct aatggctcca gggccactgc
61 ccagggccac tgctcagccc ccagcccctc tcagcccaga ctctgggtca cccagcccag
121 attctgggtc agccagccca gtggaagaag aggacgtggg ctcctcggag aagcttggca
181 gggagacgga ggaacaggac agcgactctg cagagcaggg ggatcctgct ggtgagggga
241 aagaggtcct gtgtgacttc tgccttgatg acaccagaag agtgaaggca gtgaagtcct
301 gtctaacctg catggtgaat tactgtgaag agcacttgca gccgcatcag gtgaacatca
361 aactgcaaag ccacctgctg accgatccag tgaaggacca caactggcga tactgccctg
421 cccaccacag cccactgtct gccttctgct gccctgatca gcagtgcatc tgccaggact
481 gttgccagga gcacagtggc cacaccatag tctccctgga tgcagcccgc agggacaagg
541 aggctgaact ccagtgcacc cagttagact tggagcggaa actcaagttg aatgaaaatg
601 ccatctccag gctccaggct aaccaaaagt ctgttctggt gtcggtgtca gaggtcaaag
661 cggtggctga aatgcagttt ggggaactcc ttgctgctgt gaggaaggcc caggccaatg
721 tgatgctctt cttagaggag aaggagcaag ctgcgctgag ccaggccaac ggtatcaagg
781 cccacctgga gtacaggagt gccgagatgg agaagagcaa gcaggagctg gagaggatgg
841 cggccatcag caacactgtc cagttcttgg aggagtactg caagtttaag aacactgaag
901 acatcacctt ccctagtgtt tacgtagggc tgaaggataa actctcgggc atccgcaaag
961 ttatcacgga atccactgta cacttaatcc agttgctgga gaactataag aaaaagctcc
1021 aggagttttc caaggaagag gagtatgaca tcagaactca agtgtctgcc gttgttcagc
1081 gcaaatattg gacttccaaa cctgagccca gcaccaggga acagttcctc caatatgcgt
1141 atgacatcac gtttgacccg gacacagcac acaagtatct ccggctgcag gaggagaacc
1201 gcaaggtcac caacaccacg ccctgggagc atccctaccc ggacctcccc agcaggttcc
1261 tgcactggcg gcaggtgctg tcccagcaga gtctgtacct gcacaggtac tattttgagg
1321 tggagatctt cggggcaggc acctatgttg gcctgacctg caaaggcatc gaccggaaag
1381 gggaggagcg caacagttgc atttccggaa acaacttctc ctggagcctc caatggaacg
1441 ggaaggagtt cacggcctgg tacagtgaca tggagacccc actcaaagct ggccctttct
1501 ggaggctcgg ggtctatatc gacttcccgg gagggatcct ttccttctat ggcgtagagt
1561 atgataccat gactctggtt cacaagtttg cctgcaaatt ttcagaacca gtctatgctg
1621 ccttctggct ttccaagaag gaaaacgcca tccggattgt agatctggga gaggaacccg
1681 agaagccagc accgtccttg gtggggactg ctccctagac tccaggagcc atatcccaga
1741 cctttgccag ctacagtgat gggatttgca ttttagggtg atttgggggc agaaataact
1801 gctgatggta gctggctttt gaaatcctat ggggtctctg aatgaaaaca ttctccagct
1861 gctctctttt gctccatatg gtgctgttct ctatgtgttt gcagtaattc tttttttttt
1921 ttttgagacg gagtctcgca ctgttgccca ggctggagag cagtggcgcg atcttggctc
1981 actgcaagct ccgcctcccg agttcaagca attctcctgc ctcagcctcc cgagtagctg
2041 ggattacagg tgcctgccac cacacccagc taatgttttg tatttttagt agagatgggg
2101 tttcaccatg ttggccaggc agatctcaaa ctcctgacct cgtgatgcac ccacctcggc
2161 ctcccaaagt gctgggatta catgcgtgag ccactgcgcc ctgcctgttt gtagtaattt
2221 ttaggcacca aatctccctc atcttctagt gccattctcc tctctgttca ggtaaatgtc
2281 acactgtgcc cagaatggat gaccaggaac cttaaagagt ggctgaaaag attgcagagt
2341 tatcataata aattgctaac ttgcgt
//