LOCUS AK001741 2494 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10879 fis, clone NT2RP4001896, weakly similar
to VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1.
ACCESSION AK001741
VERSION AK001741.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2494)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Ishibashi,T., Fujimori,K.,
Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Ishii,S., Kawai,Y.,
Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K.,
Masuho,Y. and Kanehori,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2494
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4001896"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000004215"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 11..2491
/codon_start=1
/protein_id="BAA91874.1"
/translation="MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYD
PLKRVVVTNLNGHTARVNCIQWICKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVH
LQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVRLWSKKGPEVMCLQTLNFGNG
FALALCLSFLPNTDVPILACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAF
GRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLE
TVLAGHENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRV
GEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQ
DLVWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMINRF
QFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDSDLPEGATVPALGLSNKA
VFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGH
GYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSP
NEKFLLAVSRDRTWSLWKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSK
YFFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVV
AVGLECGKICLYTWKKTDQVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKE
AEGAEWLHFASCGEDHTVKIHRVNKCAL"
BASE COUNT 691 a 487 c 605 g 711 t
ORIGIN
1 agttggcgac atggtggcac ccgtgctgga gacttctcac gtgttttgct gcccaaaccg
61 ggtgcgggga gtcctgaact ggagctctgg gcccagagga cttctggcct ttggcacgtc
121 ctgctccgtg gtgctctatg accccctgaa aagggttgtt gttaccaact tgaatggtca
181 caccgcccga gtcaattgca tacagtggat ttgtaaacag gatggctccc cttctactga
241 attagtttct ggaggatctg ataatcaagt gattcactgg gaaatagagg ataatcagct
301 tttaaaagca gtgcatcttc aaggccatga aggacctgtt tatgcggtgc atgctgttta
361 ccagaggagg acatcagatc ctgcattatg tacactgatc gtttctgcag ctgcagattc
421 tgctgttcga ctctggtcta aaaagggtcc agaagtaatg tgccttcaga ctttaaactt
481 tggaaatgga tttgctttgg ctctctgctt atcttttttg ccaaatactg atgtaccaat
541 attagcatgt ggcaatgatg attgcagaat tcacatattt gctcaacaaa atgatcagtt
601 tcagaaagtg ctttctctct gtggacatga ggattggatt agaggagtgg aatgggcagc
661 ctttggtaga gatcttttcc tagcaagctg ttcacaagat tgcctgataa gaatatggaa
721 gctgtatata aagtcaacat ctttagaaac tcaggatgac gataacataa gactgaaaga
781 aaatactttt accatagaaa atgaaagtgt taaaatagca tttgctgtta ctctggagac
841 agtgctagcc ggtcatgaaa actgggtaaa tgcagttcac tggcaacctg tgttttacaa
901 agatggtgtc ctacagcagc cagtgagatt attatctgct tccatggata aaaccatgat
961 tctctgggct ccagatgaag agtcaggagt ttggctagaa caggttcgag taggtgaagt
1021 aggtgggaat actttgggat tttatgattg ccagttcaat gaagatggct ccatgatcat
1081 tgctcatgct ttccacggag cgttgcacct ttggaaacag aatacagtta acccaagaga
1141 gtggactcca gagattgtca tttcaggaca ctttgatggt gtccaagacc tagtctggga
1201 tccagaagga gaatttatta tcactgttgg tactgatcag acaactagac tttttgctcc
1261 atggaagaga aaagaccaat cacaggtgac ttggcatgaa attgcaaggc ctcagataca
1321 tgggtatgac ctgaaatgtt tggcaatgat taatcggttt cagtttgtat ctggagcaga
1381 tgaaaaagtt cttcgggttt tttctgcacc tcggaatttt gtggaaaatt tttgtgccat
1441 tacaggacaa tcactgaatc atgtgctctg taatcaagat agtgatcttc cagaaggagc
1501 cactgtccct gcattgggat tatcaaataa agctgtcttt cagggagata tagcttctca
1561 gccttctgat gaagaggagc tgttaactag tactggtttt gagtatcagc aggtggcctt
1621 tcagccctcc atacttactg agcctcccac tgaggatcat cttctgcaga atactttgtg
1681 gcctgaagtt caaaaactat atgggcacgg ttatgaaata ttttgtgtta cttgtaacag
1741 ttcaaagact ctgcttgcct cagcttgtaa ggcagctaag aaagagcatg cagctatcat
1801 tctttggaac actacatctt ggaaacaggt gcagaattta gttttccaca gtttgacagt
1861 cacgcagatg gccttctcac ctaatgagaa gttcttacta gctgtttcca gagatcgaac
1921 ctggtcattg tggaaaaagc aggatacaat ctcacctgag ttcgagccag tttttagtct
1981 ttttgccttc accaacaaaa ttacttctgt gcacagtaga attatttggt cttgtgattg
2041 gagtcctgac agcaagtatt tcttcactgg gagtcgagac aaaaaggtgg ttgtctgggg
2101 tgagtgcgac tccactgatg actgtattga gcacaacatt ggcccctgct cctcagtcct
2161 ggacgtgggt ggggctgtga cagctgtcag cgtctgccca gtgctccacc cttctcaacg
2221 atacgtggtt gcagtaggat tggagtgtgg aaagatttgc ttatatacct ggaaaaagac
2281 tgatcaagtt ccagaaataa atgactggac ccactgtgta gaaacaagtc aaagccaaag
2341 tcatacactg gctatcagaa aattatgctg gaagaattgc agtggaaaaa ctgaacagaa
2401 ggaagcagaa ggtgctgagt ggttacactt tgcaagctgt ggtgaagatc acactgtgaa
2461 gatacacaga gtcaataaat gtgcactgta atgg
//