LOCUS AK001695 2484 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10833 fis, clone NT2RP4001206, moderately
similar to Drosophila melanogaster strawberry notch mRNA.
ACCESSION AK001695
VERSION AK001695.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2484)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2484
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4001206"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000004169"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 139..>2484
/codon_start=1
/protein_id="BAA91842.1"
/translation="MVEPGQDLLLAALRESGISPNDLFDIDGGDAGLATPMPTPSVQQ
SVPLSALELGLETEAAVPVKQEPETVPTPALLNVRQPPSTTTFVLNQINHLPPLGSTI
VMTKTPPVTTNRQTITLTKFIQTTASTRPSVSAPTVRNAMTSAPSKDQVQLKDLLKNN
SLNELMKLKPPANIAQPVATAATDVSNGTVKKESSNKEGARMWINDMKMRSFSPTMKV
PVVKEDDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYK
TSISEETIDNGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGII
YENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVK
KGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSK
PTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQA
VERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVI
ARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGK
CVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRKKLYSLLGI
DLTAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARKVGGLTGSSSDDSGSESDASD
NEESDYESSKNMSSGDDDDFNPFLDESNEDDENDPWLIRKDH"
BASE COUNT 791 a 473 c 590 g 630 t
ORIGIN
1 aagatggcgg cggggaggta ggcagagcag gacgccgctg ctgccgccgc caccgccgcc
61 tccgctccag tcgcctctgg tccttcaaac tcacacctcc cgggaggagc tgtcctggcg
121 ccgggtcccg cggggaaaat ggtggagcca gggcaagatt tactgcttgc tgctttgagg
181 gagagtggaa ttagtccgaa tgacctcttt gatattgatg gtggagatgc agggcttgca
241 actccaatgc ctaccccgtc agttcagcag tcagtgccac ttagtgcatt agaactaggt
301 ttggagaccg aagcagcagt tcctgttaaa caagaaccag agactgtacc tactccagca
361 ctattaaatg tgaggcagcc tccatctact acaacatttg tgctgaatca aataaatcat
421 cttccaccct tgggatctac aattgtaatg actaaaacac cacctgtaac aaccaacagg
481 caaaccatca ctttaactaa gtttatccag actactgcaa gcacacgccc gtcagtctca
541 gcaccaacag tacgaaatgc catgacctct gcaccttcaa aagaccaagt tcagcttaaa
601 gatctactga aaaataatag tcttaatgaa ctgatgaaac taaagccacc tgctaatatt
661 gctcagccag tagcaacagc agctactgat gtaagcaatg gtacagtaaa gaaagagtct
721 tctaataaag aaggagctag aatgtggata aacgacatga agatgaggag tttttcccca
781 accatgaagg ttcctgttgt aaaagaagat gatgaaccag aggaagaaga tgaagaagaa
841 atgggtcatg cagaaaccta tgcagaatac atgccaataa aattaaaaat tggcctacgt
901 catccagatg ctgtagtgga aaccagctct ttatccagtg ttactcctcc tgatgtttgg
961 tacaaaacat ccatttctga ggaaaccatt gataatggct ggttatcagc attgcagctt
1021 gaggcaatta catatgcagc ccagcaacat gaaactttcc tacctaatgg agatcgtgct
1081 ggcttcttaa taggtgatgg tgccggtgta ggaaaaggaa ggacgatagc aggaatcatc
1141 tatgaaaatt atttgttgag tagaaaacga gcattgtggt ttagtgtttc aaatgactta
1201 aagtatgatg ctgaaagaga tttaagggat attggagcaa aaaacatttt ggttcattcg
1261 ttaaataagt ttaaatacgg aaaaatttct tccaaacata atgggagtgt gaaaaagggt
1321 gttatttttg ctacttactc ttcacttatt ggtgaaagcc agtctggcgg caagtataaa
1381 actaggttaa aacaacttct gcattggtgc ggtgatgact tcgatggagt gatagtgttt
1441 gatgagtgtc ataaagccaa aaacttatgt cctgttggtt cttcaaagcc aaccaagaca
1501 ggcttagcag ttttagagct tcagaacaaa ttgccaaaag ccagagttgt ttatgctagt
1561 gcaactggtg cttctgaacc acgcaacatg gcctatatga accgtcttgg catatggggt
1621 gagggtactc catttagaga attcagtgat tttattcaag cagtagaacg gagaggagtt
1681 ggtgccatgg aaatagttgc tatggatatg aagcttagag gaatgtacat tgctcgacaa
1741 ctgagcttta ctggagtgac cttcaaaatt gaggaagttc ttctttctca gagctacgtt
1801 aaaatgtata acaaagctgt caagctgtgg gtcattgcca gagagcggtt tcagcaagct
1861 gcagatctga ttgatgctga gcaacgaatg aagaagtcca tgtggggtca gttctggtct
1921 gctcaccaga ggttcttcaa atacttatgc atagcatcca aagttaaaag ggttgtgcaa
1981 ctagctcgag aggaaatcaa gaatggaaaa tgtgttgtaa ttggtctgca gtctacagga
2041 gaagctagaa cattagaagc tttggaagag ggcgggggag aattgaatga ttttgtttca
2101 actgccaaag gtgtgttgca gtcactcatt gaaaaacatt ttcctgctcc agacaggaaa
2161 aaactttata gtttactagg aatcgatttg acagctccaa gtaacaacag ttcgccaaga
2221 gatagtcctt gtaaagaaaa taaaataaag aagcggaaag gtgaagaaat aactcgagaa
2281 gccaaaaaag cacgaaaagt aggtggcctt actggtagca gttctgacga cagtggaagt
2341 gaatctgatg cctctgataa tgaagaaagt gactatgaga gctctaaaaa catgagttct
2401 ggagatgatg acgatttcaa cccattttta gatgagtcta atgaggatga tgaaaatgat
2461 ccctggttaa ttagaaaaga ccac
//