LOCUS AK001678 4684 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10816 fis, clone NT2RP4000997, highly similar
to DNA-DIRECTED RNA POLYMERASE I 135 KD POLYPEPTIDE (EC 2.7.7.6).
ACCESSION AK001678
VERSION AK001678.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4684)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..4684
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4000997"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000004152"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 53..1063
/codon_start=1
/protein_id="BAA91831.1"
/translation="MDPGSRWRNLPSGPSLKHLTDPSYGIPREQQKAALQELTRAHVE
SFNYAVHEGLGLAVQAIPPFEFAFKDERISFTILDAVISPPTVPKGTICKEANVYPAE
CRGRRSTYRGKLTADINWAVNGISKGIIKQFLGYVPIMVKSKLCNLRNLPPQALIEHH
EEAEEMGGYFIINGIEKVIRMLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREE
HSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDS
FLRNSVSQMLRIVMEEGWLTQKQVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICI
HL"
BASE COUNT 1247 a 1039 c 1054 g 1344 t
ORIGIN
1 actggcgtcc ggcgtgtacc gagagactgg cgtccggtgt gcaggtggcc acatggatcc
61 tggcagccgg tggcggaacc tgcccagcgg gcctagccta aagcacttga ctgacccctc
121 ttatggaatc ccgcgggaac agcaaaaggc agcgttgcag gagctgacgc gggcgcacgt
181 ggagtccttc aactacgctg tgcacgaggg tctcggcctc gcggtgcagg ctatacctcc
241 ctttgaattt gctttcaaag atgagcgtat ctcttttact attctggatg ctgttatcag
301 tccacctaca gttccaaaag ggaccatctg caaagaggcc aatgtttatc cagcagaatg
361 ccggggccga aggagtacct accgtgggaa gttgacagct gatatcaact gggcagtgaa
421 tggaatctca aaaggaatca ttaagcagtt tcttggctat gttcccatca tggtgaaatc
481 caagctttgc aacttacgta accttccccc acaagccctc attgagcacc atgaggaggc
541 agaggaaatg gggggctatt ttataatcaa tggcattgaa aaagtcatcc gaatgttgat
601 tatgcctcgg agaaattttc ccattgcaat gataagacca aaatggaaaa ccagagggcc
661 tggttatact cagtatggag tttcaatgca ctgtgtgagg gaagaacatt ccgctgtcaa
721 tatgaacctc cactacttgg aaaatggcac agttatgttg aactttattt accgaaaaga
781 actgttcttt cttcctttgg gatttgcact taaggcactt gtcagctttt ctgattatca
841 gatctttcag gagctcatca aaggaaaaga ggatgattct ttccttagga actctgtttc
901 tcagatgtta aggattgtaa tggaagaggg ttggttgaca caaaaacagg tccttaacta
961 cctaggtgaa tgcttcagag taaaactcaa tgttcctgac tggtacccaa atgagcaagc
1021 tgcggagttc ctgtttaacc agtgcatctg tatccacttg taatccaata ctgaaaagtt
1081 ttatatgctt tgtctcatga cgcgaaagct ctttgcttta gccaaaggag agtgcatgga
1141 ggacaatcct gatagtttgg tgaaccagga agtcctcaca ccgggtcagc tcttccttat
1201 gttcctgaag gaaaaactgg aaggttggtt agtgtctatt aaaatagctt ttgataagaa
1261 ggctcagaag accagtgttt ccatgaacac tgacaatttg atgaggattt ttacaatggg
1321 catagacctt acaaaaccat ttgaatacct ttttgctact gggaatctgc gttctaaaac
1381 aggtcttggc ctcctacaag attctggact ttgtgttgtg gctgacaagc tgaacttcat
1441 acgctacctc tcccatttcc gctgcgtgca cagaggggct gattttgcca agatgaggac
1501 caccacagta cgcaggctgc tgccagagtc ctggggcttc ctttgtcccg tgcatacccc
1561 agacggggag ccctgtggcc tgatgaacca cctaactgcc gtatgtgagg tcgtcacaca
1621 gtttgtgtat acggcatcta ttccagcttt actgtgcaac ttgggggtca ctcccattga
1681 tggagctccc caccgatcat acagtgagtg ctaccctgtc ctgctggacg gcgtcatggt
1741 tggctgggtg gataaggatc ttgctccagg catcgcagat tctcttcgtc attttaaggt
1801 gttgagagag aaaagaattc ctccctggat ggaagtggtc cttataccca tgacaggaaa
1861 accaagtctg tacccaggat tgttcctttt taccactcct tgtagactgg tacggcctgt
1921 gcagaactta gcattgggca aagaagagct aattggaact atggaacaga tcttcatgaa
1981 tgtcgctatc tttgaggatg aagtttttgc tggagttacc acacaccagg aactctttcc
2041 acacagcctg ctgagtgtga ttgccaactt catccctttc tctgatcaca accagagtcc
2101 acggaacatg taccaatgcc agatgggtaa gcaaactatg ggctttccac ttctcactta
2161 tcaagaccga tcggataaca aactgtatcg tcttcagact cctcagagtc ccttggtgag
2221 accctccatg tatgattatt atgacatgga taactatcca attgggacca atgccatcgt
2281 tgctgtgatt tcttacactg gctatgatat ggaagatgcc atgattgtga ataaggcctc
2341 ttgggaacga ggctttgccc atggaagtgt ctacaagtct gagttcatag acctctctga
2401 aaaaattaaa caaggagata gtagcctggt gtttggcatc aaacctggtg acccacgcgt
2461 tctgcagaag ttagatgacg atggattgcc gtttatagga gcaaaactgc agtacggaga
2521 tccgtattac agctacctca acctcaacac cggggaaagt tttgtaactg gatgttgttt
2581 aacttgatgt tgaccttttg gattaagagg actatcagat taaagcaaaa tgtaatttta
2641 attcaatgaa gatatcatta ccaggttact cttgagattt ttcaacggtg ttagaactct
2701 caaccaagac ctgaaaacca agtatgcaag gtttctgaat ctctctggta gattaactat
2761 tgacaatgat tttctgttat ctttgttcaa aaagttcatg tcttctcaaa atatgaaata
2821 ttgataaatg gaagagcata cggtgacaag tctcctttcc aaccccaggt tccctacacc
2881 ctgctctcag caggcagtga gtgtcacaca cctgttaatc catcttgagc aggacagtac
2941 tatacaaata gaatgcaagc tgtaatgtaa ttttatattt tcttatagcc acgttgaagt
3001 aaaaacaaac aggtacagtg ttttttacca gctttataga agtacagttg ttacatattt
3061 aatgaataca atttgatggg tctgactata tgcacacacc tttgatacca tcaccacaat
3121 cagggtaata aacatacctg tcatctccac aagtttcctc ctgccccttt gttttttgct
3181 ttttggttgc tgttgagttt ttgttttgtc ttctgtggta agaacaccta actcaagacc
3241 taccctctta acaaatcttt aagtgcacga tatagtattg ttaattccag gcaccatgtt
3301 gtacaacaga tctttagacc ttacttgtct tgcataactg aagctttata cctgttgaac
3361 aactctccat ttccctggcc cctagcaacc acccttctac cctgtttcta tgagtttgac
3421 tattacagat atctcatata gtgggatcat gcaatatttg tcctgtgact ggcttatttc
3481 acttagcata gtgaaataag attcatccat tttggaagcc aggcatggtg ctgtgcatct
3541 atagtccctg ctatttgaga ggctgaggtg ggaggatcat ttgagtgcag gagttcaagg
3601 acagcctggg taatatagga agaccctgtc ttaaagaccc tgacctcaag tgatccaccc
3661 acctcggcct ccgaaagtgc taggattaca ggtgtgagcc actgtgcctg gcctccggtg
3721 agtattttat atttagtcta cacttccata cttggctttt ttctgctttt atattgatct
3781 gctttcatag cagtgtgtag agtgccactt atgttttctt tcttgtgtac agtattttat
3841 tgtatggatt taccatcccc tgtgtattta agttgttcca ttctttggcc attataactt
3901 ttttctgcaa atattctggt gacttatctt tggccattat aaactgttga taatagatca
3961 tcttgtatat acttctgcaa ttataagatg ttttttgatg atgagagctt tcctaaggta
4021 attctttcct gagtttggtt cagatggtct gtcactaatt ataaggcaga taggaacaga
4081 cagaaaaatc tatcatttca agataggctt agcaggatgg gcgcagtggc tcacgccact
4141 aatcccaaca ttttaggagg cctaggcagg agcaatcact tgtgcctggg agttctagac
4201 tagcctgggc gagacttcat ctctacaaaa aaagcaacaa cgacaaaaaa aattagccaa
4261 gcatagtggc acacccctgt agtcccagct acttgggagg ctgaggtggg aggattgctt
4321 gaacccaaga ggtcgaggct gcagtgagcc aagattgtgc cactgcactc cagcctgggt
4381 gacagagcag gaccctgtct ctattttata aattaaaaaa ggctgggtgt ggtggctcac
4441 acccataatc ccaacacttt ggctcagcag attgcttgaa cccaggaatt caagtccaat
4501 ctgggcaaca tggggaaacc ccagctctac aaaaaaaatt agcctggtgt ggtggcacat
4561 gcctgtagtt ccagctactc aggaggctga ggtgggagaa tctcctgagc ctggaaggtc
4621 caggcagtga gccaagattg tgccaccaca ctccagcctg ggcgacagaa tgagaccctg
4681 tctc
//