LOCUS AK001671 3198 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10809 fis, clone NT2RP4000927, weakly similar
to UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC 3.1.2.15).
ACCESSION AK001671
VERSION AK001671.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3198)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3198
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4000927"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000004145"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 337..>3198
/codon_start=1
/protein_id="BAA91825.1"
/translation="MPIVDKLKEALKPGRKDSADDGELGKLLASSAKKVLLQKIEFEP
ASKSFSYQLEALKSKYVLLNPKTEGASRHKSGDDPPARRQGSEHTYESCGDGVPAPQK
VLFPTERLSLRWERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCH
QGSFCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTID
AMQKACLNGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR
QAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANF
SGGKITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNG
QWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIP
DHSKKNIGNGIISSPLTGKRQDSGTMKKPHTTEEIGVPISRNGSTLGLKSQNGCIPPK
LPSGSPSPKLSQTPTHMPTILDDPGKKVKKPAPPQHFSPRTAQGLPGTSNSNSSRSGS
QRQGSWGSRDVVLSTSPKLLATATANGHGLKGNDESAGLDRRGSSSSSPEHSASSDST
KAPQTPRSGAAHLCDSQETNCSTAGHSKTPPSGADSKTVKLKSPVLSNTTTEPASTMS
PPPAKKLALSAKKASTLWRATGNDLRPPPPSPSSDLTHPMKTSHPVVASTWPVHRARA
VSPAPQSSSRLQPPFSPHPTLLSSTPKPPGTSEPRSCSSISTALPQVNEDLVSLPHQL
PEASEPPRSPSEKRKKTFVGEPQRLGSETCLPQHIREATAAPHGKRKRKKKKRPEDTA
ASALQEGQTQRQPGSPMYRREGQAQLPAVRRQEDGTQPQVNGQQVGCVTDGHHASSRK
RRRKGAEGLGEEGGLHQDPLRHSCSPMGDGDPEAMEESPR"
BASE COUNT 746 a 1013 c 881 g 558 t
ORIGIN
1 ctttcggagt tagcgcagcg cgaacgctgg gtgcggcgcc tttaagcgtc gcggtgacac
61 gtgtgtgagg cgccggaggc ccggatggtg cgcgtgctgg gccgcgggcc gaaggagtcg
121 ccagggctgc gtaggcttgt ggcgcgcccg cggagaggcc ggggctctga cgcccgctct
181 gcggcttcgg tgtttgaaca ggccacagtc caggagcgct tacattcagg agctccgcgt
241 agcacctgcc caaccaaact cagccctccg ttaagatcct ggttccatgc cgcagtagga
301 cagcaggccc aagtctgcac atcccagtga tgcaccatgc caatagtgga taagttgaag
361 gaggccctga aacccggccg caaggactcg gctgatgatg gagaactggg gaagcttctt
421 gcctcctctg ccaagaaggt ccttttacag aaaatcgagt tcgagccagc cagcaagagc
481 ttctcctacc agctggaggc cttaaagagc aaatatgtgt tgctcaaccc caaaacagag
541 ggagctagtc gccacaagag tggagatgac ccaccggcca ggagacaggg cagtgagcac
601 acgtatgaga gctgtggtga cggagtccca gccccgcaga aagtgctttt ccccacggag
661 cgactgtctc tgaggtggga gcgggtcttc cgcgtgggcg caggactcca caaccttggc
721 aacacctgct ttctcaatgc caccatccag tgcttgacct acacaccacc tctagccaac
781 tacctgctct ccaaggagca tgctcgcagc tgccaccagg gaagcttctg catgctgtgt
841 gtcatgcaga accacattgt ccaggccttc gccaacagcg gcaacgccat caagcccgtc
901 tccttcatcc gagacctgaa aaagatagcc cgacacttcc gctttgggaa ccaggaggac
961 gcgcatgagt tcctgcggta caccatcgac gccatgcaga aagcctgcct gaatggctgt
1021 gccaagttgg atcgtcaaac gcaggctact accttggtcc atcaaatttt tggagggtat
1081 ctcagatcac gcgtgaagtg ctccgtgtgc aagagcgtct cggacaccta cgacccctac
1141 ttggacgtcg cgctggagat ccggcaagct gcgaatattg tgcgtgctct ggaacttttt
1201 gtgaaagcag atgtcctgag tggagagaat gcctacatgt gtgctaaatg caagaagaag
1261 gttccagcca gcaagcgctt caccatccac agaacatcca acgtcttaac cctttccctc
1321 aagcgttttg ccaacttcag cggggggaag atcaccaagg atgtaggcta tccggaattc
1381 ctcaacatac gtccgtatat gtcccagaat aatggtgatc ctgtcatgta tggactctat
1441 gctgtcctgg tgcactcggg ctacagctgc catgccgggc actattactg ctacgtgaag
1501 gcaagcaatg gacagtggta ccagatgaat gattccttgg tccattccag caacgtcaag
1561 gtggttctga accagcaggc ctacgtgctg ttctatctgc gaattccagg ctctaagaaa
1621 agtcccgagg gcctcatctc caggacaggc tcctcctccc ttcccggccg cccgagtgtg
1681 attccagatc actccaagaa gaacatcggc aatgggatta tttcctcccc actgactgga
1741 aagcgacaag actctgggac gatgaagaag ccgcacacca ctgaagagat tggtgtgccc
1801 atatccagga atggctccac cctgggcctg aagtcccaga acggctgcat tcctccaaag
1861 ctgccctcgg ggtccccttc ccccaaactc tcccagacac ccacacacat gccaaccatc
1921 ctagacgacc ctggaaagaa ggtgaagaag ccagctcctc cacagcactt ttcccccaga
1981 actgctcagg ggctgcctgg gaccagcaac tcgaatagca gcagatctgg gagccaaagg
2041 cagggctcct ggggcagcag ggatgttgtc ctctctacct cacctaagct cctggctaca
2101 gccactgcca acgggcatgg gctgaagggg aacgacgaga gcgctggcct cgacaggagg
2161 ggctccagca gctccagccc agagcactcg gccagcagcg actccaccaa ggccccccag
2221 acccccagga gtggagcggc ccatctctgc gattctcagg aaacgaactg ttccaccgct
2281 ggccactcca aaacgccgcc aagtggagca gattctaaga cggtgaagct gaagtcccct
2341 gtcctgagca acaccaccac tgagcctgca agcaccatgt ctcctccacc agccaaaaaa
2401 ctggcccttt ctgccaagaa ggccagcacc ctgtggaggg cgaccggcaa tgacctccgt
2461 ccacctcccc cctcaccatc ctccgacctc acccacccca tgaaaacctc tcaccccgtc
2521 gttgcctcca cttggcccgt ccatagagcc agggctgtgt cacctgctcc ccaatcatcc
2581 agccgcctgc aacccccctt cagcccccac cccacattgc tgtccagtac ccccaagccc
2641 ccagggacgt cagaaccacg gagctgctcc tccatctcga cggcgctgcc tcaggtcaac
2701 gaggaccttg tgtcccttcc acaccagttg ccagaggcca gtgagccccc ccggagcccc
2761 tctgagaaga ggaaaaagac ctttgtggga gagccgcaga ggctgggctc agagacgtgc
2821 ctcccacagc acatcaggga ggccactgcg gctccccacg ggaagaggaa gaggaagaag
2881 aagaagcgcc cggaggacac agctgccagc gccctgcagg aggggcagac acagagacag
2941 cctgggagcc ccatgtacag gagggagggc caggcacagc tgcccgctgt cagacggcag
3001 gaagatggca cacagccaca ggtgaatggc cagcaggtgg gatgtgttac ggacggccac
3061 cacgcgagca gcaggaagcg gaggaggaaa ggagcagaag gtcttggtga agaaggcggc
3121 ctgcaccagg acccacttcg gcacagctgc tctcccatgg gtgatggtga tccagaggcc
3181 atggaagagt ctccaagg
//