LOCUS AK001657 2897 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10795 fis, clone NT2RP4000638.
ACCESSION AK001657
VERSION AK001657.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2897)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2897
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4000638"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000004131"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 88..2643
/codon_start=1
/protein_id="BAA91816.1"
/translation="MAVETLSPDWEFDRVDDGSQKIHAEVQLKNYGKFLEEYTSQLRR
IEDALDDSIGDVWDFNLDPIALKLLPYEQSSLLELIKTENKVLNKVITVYAALCCEIK
KLKYEAETKFYNGLLFYGEGATDASMVEGDCQIQMGRFISFLQELSCFVTRCYEVVMN
VVHQLAALYISNKIAPKIIETTGVHFQTMYEHLGELLTVLLTLDEIIDNHITLKDHWT
MYKRLLKSVHHNPSKFGIQEEKLKPFEKFLLKLEGQLLDGMIFQACIEQQFDSLNGGV
SVSKNSTFAEEFAHSIQSIFANVEAKLGEPSEIDQRDKYVGICGLFVLHFQIFRTIDK
KFYKSLLDICKKVPAITLTANIIWFPDNFLIQKIPAAAKLLDRKSLQAIKIHRDTFLQ
QKAQSLTKDVQSYYVFVSSWMMKMESILSKEQRMDKFAEDLTNRCNVFIQGFLYAYSI
STIIKTTMNLYMSMQKPMTKTSVKALCRLVELLKAIEHMFYRRSMVVADSVSHITQHL
QHQALHSISVAKKRVISDKKYSEQRLDVLSALVLAENTLNGPSTKQRRLIVSLALSVG
TQMKTFKDEELFPLQVVMKKLDLISELRERVQTQCDCCFLYRHRAVFPIYLDDVYENA
VDAARLHYMFSALRDCVPAMMHARHLESYEILLDCYDKEIMEILNEHLLDKLCKEIEK
DLRLSVHTHLKLDDRNPFKVGMKDLALFFSLNPIRFFNRFIDIRAYVTHYLDKTFYNL
TTVALHDWATYSEMRNLAAQRYGLVMTEAHLPSQTLEQGLDVLEIMRNIHIFVSRYLY
NLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTKWAFTAWRGGPRL"
BASE COUNT 880 a 554 c 628 g 835 t
ORIGIN
1 aagtcacgtg ctgtgacagt agctggggtg aggccgtcgt cgccgcacgg gctggttggg
61 gctgtgtctg tgggaggcgc cggggtgatg gcggtggaga ctctgtcccc ggactgggag
121 tttgaccgcg ttgacgacgg ctcgcagaaa attcatgccg aagtccaact taagaattat
181 gggaaatttc ttgaggagta tacctctcaa ctgagaagaa ttgaggacgc tctggatgac
241 tcaattggag atgtttggga tttcaatctt gatcctatag cattaaagct tttgccttat
301 gaacagtcct ctcttttgga actcataaag actgaaaaca aggtcttaaa caaagtcatc
361 actgtttatg ctgcactttg ttgtgaaatc aagaaattaa aatatgaggc tgaaactaaa
421 ttttacaatg gtctcttgtt ttatggagaa ggagctacag atgccagcat ggtggaaggt
481 gattgccaaa ttcaaatggg gagatttatt tcattcttac aggaactgtc ttgctttgtt
541 acgaggtgct atgaagtggt gatgaacgta gtccaccagt tggctgccct ctatatcagt
601 aacaagattg cacccaaaat tatagagaca actggagttc attttcagac tatgtatgag
661 cacttgggag aactgctaac agttttgctc accctggatg aaattattga taatcatatc
721 acactgaaag accactggac tatgtacaaa aggttactga aatctgtcca tcacaatcct
781 tcaaaatttg gaattcagga agaaaaatta aagccatttg aaaagttctt gctgaagcta
841 gaagggcaat tactggatgg aatgatattc caggcctgta tagaacaaca atttgattct
901 ctcaatggag gagtatctgt gtcaaaaaat agtacttttg ctgaggaatt tgcacatagt
961 attcagtcaa tttttgcaaa tgtagaagcc aaacttggag aaccttctga aattgaccag
1021 agagacaagt atgttggaat ttgtggactc tttgtattgc actttcagat ttttcgaact
1081 attgataaaa agttttataa gtctttattg gacatttgta agaaggtacc agccatcact
1141 ctaactgcta atattatttg gtttcctgat aattttctga tccagaaaat accagcagct
1201 gccaaactgc tagacagaaa aagtcttcaa gccattaaaa tacacaggga tacttttcta
1261 caacagaaag ctcaatcact taccaaagat gtacagtctt actacgtctt tgtgagctca
1321 tggatgatga aaatggaatc tattttgtct aaagagcaga gaatggataa atttgctgaa
1381 gatctcacca atagatgtaa tgtttttata cagggcttct tgtatgcata tagtattagt
1441 accattatta aaaccacaat gaatctctac atgtccatgc aaaagccaat gaccaaaacc
1501 tcagttaagg cattgtgcag gcttgttgaa cttctcaagg caatagagca tatgttctac
1561 aggagaagca tggttgtggc tgattcagtt tcacatataa cacagcacct tcaacatcag
1621 gctcttcatt ctatttctgt ggccaagaaa agagtgattt ctgacaaaaa atacagcgaa
1681 cagcgtcttg atgtgctctc tgctctagtt ttggctgaaa acactctaaa tggaccaagc
1741 acaaagcaac ggcgacttat tgtttctttg gcactaagtg ttggcacaca aatgaaaaca
1801 tttaaagatg aagaactctt tccacttcaa gtagtcatga aaaaactgga tcttattagt
1861 gaacttagag aacgagtcca aacacaatgt gactgttgtt ttttataccg gcatcgagct
1921 gtcttcccaa tttatttaga tgatgtatat gaaaatgctg ttgatgcagc cagattacat
1981 tacatgttca gtgctttgcg cgactgtgta cctgctatga tgcatgcaag gcatttagag
2041 tcctatgaga tacttctgga ttgctatgac aaggaaatta tggaaatttt aaatgagcat
2101 ttgctggaca aattatgcaa agaaatagag aaagatctgc gactttctgt gcatactcat
2161 ttaaagctgg atgaccgaaa ccctttcaaa gttggcatga aagacctggc tctttttttc
2221 tctctgaatc caattcggtt tttcaatcgt ttcattgaca ttcgggctta cgtaactcac
2281 tacctagaca agactttcta caatctaaca actgtagccc ttcatgactg ggccacttat
2341 agtgagatga gaaacttagc tgctcagcgt tatggactgg ttatgacaga ggcacatctt
2401 cccagtcaga ctttggaaca gggccttgat gttttagaaa ttatgagaaa cattcatata
2461 tttgtgtccc gatacctcta taatctcaac aatcagattt ttattgaacg aacaagcaat
2521 aacaagcatt tgaatactat taatattcgg catattgcta attcaattcg aacacatggc
2581 acgggaatta tgaatacaac taaatgggca ttcaccgctt ggcgtggtgg cccacgcttg
2641 taatcccagc actttgggag gctgaagcag gaggatcacc tgaggttggg agttcaagac
2701 cagcctgacc aacatggaga aaccccatct ctactaaaaa tacaaaatta gccaggcgtg
2761 gtggcgggcg cctgtaatcc cagctgcttg ggaggctgag gcaggagaat cgcttgaacc
2821 tgggaggcag aggttgcagt gagctgagat tgcgccattg cactccagct tgggcagcaa
2881 gagcgaaact ccatctc
//