LOCUS AK001644 2642 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10782 fis, clone NT2RP4000415.
ACCESSION AK001644
VERSION AK001644.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2642)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J.,
Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Sasaki,N.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2642
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP4000415"
/clone_lib="NT2RP4"
/db_xref="H-InvDB:HIT000004118"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 10..2331
/codon_start=1
/protein_id="BAA91805.1"
/translation="MAECGASGSGSSGDSLDKSITLPPDEIFRNLENAKRFAIDIGGS
LTKLAYYSTVQHKVAKVRSFDHSGKDTEREHEPPYEISVQEEITARLHFIKFENTYIE
ACLDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKVDKEDVMTCLIKGCNFVLK
NIPHEAFVYQKDSDPEFRFQTNHPHIFPYLLVNIGSGVSIVKVETEDRFEWVGGSSIG
GGTFWGLGALLTKTKKFDELLHLASRGQHSNVDMLVRDVYGGAHQTLGLSGNLIASSF
GKSATADQEFSKEDMAKSLLHMISNDIGQLACLHARLHSLDRVYFGGFFIRGHPVTMR
TITYSINFFSKGEVQALFLRHEGYLGAIGAFLKGAEQDNPNQYSWGENYAGSSGLMSA
SPELGPAQRARSGTFDLLEMDRLERPLVDLPLLLDPPSYVPDTVDLTDDALARKYWLT
CFEEALDGVVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLD
TREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNV
FDWGAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADN
SGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSA
LQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRC
ESLKLAVIKNAWLAERLGGRLFSVIFKYEVPAE"
BASE COUNT 590 a 749 c 794 g 509 t
ORIGIN
1 actttcaaaa tggcggagtg tggagcgagc ggcagcggga gcagcgggga cagtctggac
61 aagagcatca cgctgccccc cgacgagatc ttccgcaacc tggagaacgc caagcgcttc
121 gccatcgaca taggcgggtc gttaaccaag ctggcctact attcaacggt acagcacaaa
181 gtcgccaagg tgcggtcttt cgaccactcc ggaaaggaca cagaacgtga acatgagccg
241 ccctatgaga tttcagttca agaagagatc actgctcgac tgcacttcat taagtttgag
301 aatacctaca tcgaagcctg cctggacttc atcaaagacc atctcgtcaa cacagagacc
361 aaggtcatcc aggcgaccgg gggcggggcc tacaagttca aggacctcat cgaagagaag
421 ctgcggctga aagtcgacaa ggaggacgtg atgacgtgcc tgattaaggg gtgcaacttc
481 gtgctcaaga acatccccca tgaggccttc gtgtaccaga aggattccga ccctgagttc
541 cggttccaga ccaaccaccc ccacattttc ccctatcttc ttgtcaatat cggctctgga
601 gtctccatcg tgaaggtgga gacggaggac aggttcgagt gggtcggcgg cagctccatt
661 ggaggcggca ccttctgggg gcttggcgct ctgctcacca aaacgaagaa gtttgacgag
721 ctcctgcacc tggcctcgag gggccagcac agcaatgtgg acatgctggt gcgggacgtc
781 tacggcggcg cccaccagac tctcgggctg agcgggaacc tcatcgccag cagcttcggg
841 aagtcggcca ccgccgacca agagttctcc aaagaagaca tggcgaagag cctgctgcac
901 atgatcagca acgacattgg gcagctggcc tgcctccacg cacggctgca cagcctggac
961 cgcgtgtact ttggaggctt ctttatccgg ggccaccccg tgaccatgcg caccatcacc
1021 tatagcatca acttcttctc caagggggaa gtgcaggcgc tgtttctgag gcacgaaggc
1081 tacctgggag ccatcggagc gttcctgaaa ggagctgagc aggacaatcc taaccagtac
1141 agctggggag agaactatgc aggcagctcc gggctgatga gtgcatcacc cgagctcggc
1201 ccggcgcagc gggcgcggag tggcactttt gacttgctgg aaatggaccg gctggagagg
1261 ccactggttg acctgccgct cctcctggac ccgccctcct acgtgcccga cacggtggac
1321 ctcaccgatg acgctctggc ccgaaaatac tggctcacct gctttgagga ggccctggac
1381 ggggtagtga agcgcgcagt ggcgagccag ccagactctg tggatgcagc cgagagggcg
1441 gagaagttcc ggcagaagta ctggaacaag cttcagaccc tgaggcagca gcccttcgcc
1501 tatgggaccc tgaccgtgcg cagcctgctg gacaccaggg agcactgtct gaacgagttc
1561 aacttcccgg atccctactc caaagtgaag cagcgggaga atggcgtggc gctgaggtgc
1621 ttccccgggg tcgtgcgctc cctggacgcg ctgggctggg aggaacggca gctggcgctg
1681 gtgaaaggcc tcctggcggg gaatgtcttc gactgggggg ccaaagccgt gtctgctgtc
1741 cttgaatccg acccctactt tgggtttgaa gaagcaaaga ggaagttaca agaaagaccc
1801 tggctcgtgg attcctacag cgagtggctt cagagattaa aggggccccc tcataaatgt
1861 gccttaattt tcgcagataa cagtggaata gacatcattt tgggagtctt cccctttgtc
1921 agggagctac tccttagagg gacagaggtc atcctggcgt gcaactcagg ccccgccctg
1981 aacgacgtga cccacagcga gtccctcatc gtggcagagc gtattgcggg catggaccct
2041 gtcgtgcact ctgcgctcca ggaagagagg ctgctgctgg tgcagacggg ctccagctcc
2101 ccgtgcctcg acctcagccg cctggataag gggctggccg cactggtgcg ggagcgtggc
2161 gcggatctgg tggtcatcga gggcatgggc cgtgctgtcc acacaaacta ccacgcagcc
2221 ctgcgctgcg agagcctcaa gctggccgtc atcaagaacg cgtggctggc cgagcggctg
2281 ggcggccggc tcttcagcgt catcttcaag tacgaggtcc cagccgagtg aggcgctgca
2341 gctgccggac tcttctgctt gtcacttgtc aggaatgtgt ttttaccacc acagggaaac
2401 tgcgttcaaa tcaacgtatt tatatggtac tgctgtgacg cggcacatac accccagccg
2461 cacagatgcg tgtgacccag aggcgagacg cagctttgtc ctgggagacg ttcatattgg
2521 aatctattta actgctaaag aaccttttat atatatatat atataaatag agagatctat
2581 acaggtatgt ctgacgggac gcagcaccgt gggcacgcac caaatagagt ttttaaaaga
2641 gg
//