LOCUS AK001591 2497 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10729 fis, clone NT2RP3001260, highly similar
to Calsyntenin-1 precursor.
ACCESSION AK001591
VERSION AK001591.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2497)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2497
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3001260"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000004065"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 7..1017
/codon_start=1
/note="highly similar to Calsyntenin-1 precursor"
/protein_id="BAG50945.1"
/translation="MVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTIT
REVEPEGDGAEDPTVQESLLSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKG
IEVSSSELGMTFTGVDTMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNE
FKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVV
IVVCVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQ
HSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTL
SY"
BASE COUNT 538 a 711 c 702 g 546 t
ORIGIN
1 tacgtgatgg ttttacagcc cgaggagccc aagatcagcc tgagtggcgt ccaccatttt
61 gcccgagcag cttctgaatt tgaaagctca gaaggggtgt tccttttccc tgagcttcgc
121 atcatcagca ccatcacgag agaagtggag cctgaagggg acggggctga ggaccccaca
181 gttcaagaat cactgttgtc cgaggagatc gtgcacgacc tggatacctg tgaggtcacg
241 gtggagggag aggagctgaa ccacgagcag gagagcctgg aggtggacat ggcccgcctg
301 cagcagaagg gcattgaagt gagcagctct gaactgggca tgaccttcac aggcgtggac
361 accatggcca gctacgagga ggttttgcac ctgctgcgct atcggaactg gcatgccagg
421 tccttgcttg accggaagtt taagctcatc tgctcagagc tgaatggccg ctatatcagc
481 aacgaattta aggtggaggt gaatgtaatc cacacggcca accccatgga acacgccaac
541 cacatggctg cccagccaca gttcgtgcac ccggaacacc gctcctttgt tgacctgtca
601 ggccacaacc tggccaaccc ccacccgttc gcagtcgtcc ccagcactgc gacagttgtg
661 atcgtggtgt gcgtcagctt cctggtgttc atgattatcc tgggggtatt tcggatccgg
721 gccgcacatc ggcggaccat gcgggatcag gacaccggga aggagaacga gatggactgg
781 gacgactctg ccctgaccat caccgtcaac cccatggaga cctatgagga ccagcacagc
841 agtgaggagg aggaggaaga ggaagaggaa gaggaaagcg aggacggcga agaagaggat
901 gacatcacca gcgccgagtc ggagagcagc gaggaggagg agggggagca gggcgacccc
961 cagaacgcaa cccggcagca gcagctggag tgggatgact ccaccctcag ctactgaccc
1021 gtgcccccgg ccacctcggt ttctgctttc gaagactctg ctgccatccg ttctcccagt
1081 cccaagggtc cacgatgtac aaagtcattt cggccagtag gtgtgcagac ccctccccgc
1141 cacgatcgtc gctgtgcttg gtgtgtagga ccctaggctc cccgcccacc ctctgcctgg
1201 tcgcgctctt cagtcccacg aggagctgac acgtcctctc tggccgccat ccggctcgca
1261 caggggcctc ccagcgcctc aggccccgcg tttgtgtctg gagtctcccc ccggggagag
1321 gacactggcc cctcgcactc cagaaaagcc atgccagctg ggctcgttga caaagggtaa
1381 aacatgctca ctcccacccg gtaatcattt ttttcttttt ttaaaaaaag tttttatttt
1441 ttccaaacta gtgcatgtat aaataatggc aggatggggg gtactgtgta gatgattaac
1501 tgacttttta atattttgta aataaatcgg attccttgtg tcctttgtgc tagtgtaacc
1561 cgggactgga atgtaaagtg aagttcggag ctctgagcac gggcttttcc cgccgggtcc
1621 tccctcccca gaccccagag ggagaggccc accccgccca gccccgcccc agcccctgct
1681 caggtctgag tatggctggg agtcgggggc cacaggcctc tagctgtgct gctcaagaga
1741 ctggatcagg gtagctacaa gtggccgggc cttgcctttg ggattctacc tgttcctaat
1801 ttggtgtggg gtgcggggtc cctggcccct tttccacact cctcctccga cagcagctcc
1861 ctgggcagtg gcctggtctc accgtgtgca gccttgtggt ttatgcttaa atgtacattt
1921 tcctgctggt aaaaggagaa actgagaggt gtcctgcaga ccggctgacc actccttttg
1981 gagacggcag gaggcctgag cgatccgtac tcagaacgtc caggagagac gcatggcccg
2041 aagtcaaagt gctggaattt tccaaaacag cctgttctct cctctctcct ccccagagca
2101 ccccctgcca tcaggggggt tgaaatccct ctcccccagg agccctgctg ctttgcttgg
2161 tggtagggca ggagagcaaa caaacagtca tggtctaaaa cccacatagc actttgctct
2221 tagttacatg taaaatttta gatttctaaa acaggtgggc aatcattttg aatactgttc
2281 tgtgaccctg actgctagtt ctgaggacac tggtggctgt gctatgtgtg gccatcctcc
2341 atgtcccgtc cctgtagctg ctctgtttag acagcggaca gacgctcacg cccaggggat
2401 gtcctcacgc tgtcgccgcg cggtttccct tcgcagatgt gtatactcat gataggtcag
2461 aaagtgtatc cgctacaata aagttctggt tctaact
//