LOCUS AK001579 3179 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10717 fis, clone NT2RP3001084, highly similar
to Centaurin-delta 3.
ACCESSION AK001579
VERSION AK001579.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3179)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3179
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3001084"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000004053"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 1150..2637
/codon_start=1
/note="highly similar to Centaurin-delta 3"
/protein_id="BAG50942.1"
/translation="MCTRNLALLFAPSVFQTDGRGEHEVRVLQELIDGYISVFDIDSD
QVAQIDLEVSLITTWKDVQLSQAGDLIMEVYIEQQLPDNCVTLKVSPTLTAEELTNQV
LEMRGTAAGMDLWVTFEIREHGELERPLHPKEKVLEQALQWCQLPEPCSASLLLKKVP
LAQAGCLFTGIRRESPRVGLLRCREEPPRLLGSRFQERFFLLRGRCLLLLKEKKSSKP
EREWPLEGAKVYLGIRKKLKPPTPWGFTLILEKMHLYLSCTDEDEMWDWTTSILKAQH
DDQQPVVLRRHSSSDLARQKFGTMPLLPIRGDDSGATLLSANQTLRRLHNRRTLSMFF
PMKSSQGSVEEQEELEEPVYEEPVYEEVGAFPELIQDTSTSFSTTREWTVKPENPLTS
QKSLDQPFLSKSSTLGQEERPPEPPPGPPSKSSPQARGSLEEQLLQELSSLILRKGET
TAGLGSPSQPSSPQSPSPTGLPTQTPGFPTQPPCTSSPPSSQPLT"
BASE COUNT 671 a 950 c 878 g 680 t
ORIGIN
1 ttttctctgc ttttcgctac cccggtcact ctcatttctc tcccctattc cttgtctctt
61 cccccatccc cctttctcct gtcctccccc tgcctctaca gtggttctcc ccgctgagct
121 gccaccagct gctgggcccc gggctgctgc ggctgggccg cctatggctg cggtccccct
181 cccatacagc cccggcccct ggtctctggc tgtcagggtt tggcctcctt cgtggtgacc
241 acctcttcct gtgctcagcg ccgggcccag gccccccagc ccctgaggac atggtgcatc
301 tgcggcggct acaggagatc agtgtggttt ctgcagctga caccccagat aagaaagagc
361 atttggtcct ggtggagaca ggaaggaccc tgtatctgca aggagagggc cggctggact
421 tcacggcatg gaacgcagcc attgggggcg cggctggtgg gggcggcaca gggctgcagg
481 agcagcagat gagccggggt gacatcccca tcatcgtgga tgcctgcatc agttttgtta
541 cccagcatgg gctccggctg gaaggtgtat accggaaagg gggcgctcgt gcccgcagcc
601 tgagactcct ggctgagttc cgtcgggatg cccggtcggt gaagctccga ccaggggagc
661 actttgtgga ggatgtcact gacacactca aacgcttctt tcgtgagctc gatgaccctg
721 tgacctctgc acggttgctg cctcgctgga gggaggctgc tggtattcct aagatccctg
781 agagccaagg cccaaccagg atctctgcct tcccccacca gaatccatgg tttggcagcc
841 ctccgcccca tcacttccca ccctggggga tcatccagag acttggctca gggggaggtg
901 ggaagggggc agagacacat ccatcctgca tttgtgccta aaaatccctc cctctgtacc
961 agctgccact ctttcttccc gggtcctccc caaccctcct ccattccatc cccagagctg
1021 ccccagaaga atcagcgcct ggagaaatat aaagatgtga ttggctgcct gccgcgggtc
1081 aaccgccgca cactggccac cctcattggg catctctatc gggtgcagaa atgtgcggct
1141 ctaaaccaga tgtgcacgcg gaacttggct ctgctgtttg cacccagcgt gttccagacg
1201 gatgggcgag gggagcacga ggtgcgagtg ctgcaagagc tcattgatgg ctacatctct
1261 gtctttgata tcgattctga ccaggtagct cagattgact tggaggtcag tcttatcacc
1321 acctggaagg acgtgcagct gtctcaggct ggagacctca tcatggaagt ttatatagag
1381 cagcagctcc cagacaactg tgtcaccctg aaggtgtccc caaccctgac tgctgaggag
1441 ctgactaacc aggtactgga gatgcggggg acagcagctg ggatggactt gtgggtgact
1501 tttgagattc gcgagcatgg ggagctggag cggccactgc atcccaagga aaaggtctta
1561 gagcaggctt tacaatggtg ccagctccca gagccctgct cagcttccct gctcttgaaa
1621 aaagtccccc tggcccaagc tggctgcctc ttcacaggta tccgacgtga gagcccacgg
1681 gtggggctgt tgcggtgtcg tgaggagcca cctcgcttgc tgggaagccg cttccaggag
1741 aggttctttc tgctgcgtgg ccgctgcctg ctgctgctca aggagaagaa aagctctaaa
1801 ccagaacggg agtggccttt ggaaggtgcc aaggtctacc tgggaatccg caagaagtta
1861 aagcccccaa caccgtgggg cttcacattg atactagaga agatgcacct ctacttgtcc
1921 tgcactgacg aggatgaaat gtgggattgg accaccagca tccttaaagc ccagcacgat
1981 gaccagcagc cagtggtctt acgacgccat tcctcctctg accttgcccg tcagaagttt
2041 ggcactatgc ctttgctgcc tatccgtggg gatgacagtg gagccaccct cctctctgcc
2101 aatcagaccc tgcggcgact acacaaccgg aggaccctgt ccatgttctt tccaatgaag
2161 tcatcccagg ggtctgtgga ggagcaagag gagctggagg agcctgtgta cgaggagcca
2221 gtgtatgagg aagtaggggc cttccctgag ttgatccagg acacttctac ctccttctcc
2281 accacacggg agtggacagt gaagccagag aaccccctca ccagccagaa gtcattggat
2341 caaccctttc tctccaagtc aagcaccctt ggccaggagg agaggccacc tgagccccct
2401 ccaggccccc cttcaaagag cagtccccag gcacgggggt ccctagagga acagctgctc
2461 caggagctca gcagcctcat cctgaggaaa ggagagacca ctgcaggcct gggaagtcct
2521 tcccagccat ccagccccca atcccccagc cccactggcc ttccaacaca gacacctggc
2581 ttccccaccc aacccccatg cacttccagt ccaccctcca gccagcccct cacatgaccc
2641 taggaccagc agtctgagag ggtaggtacc agaagaccca gaaactctta tcgtggcact
2701 gttgcagctt cctctgccct ggctggaaag actccagaat ccagtgtggt gctgtggaag
2761 gagcactgga ctaaaggctt cagtggctgc gtgtcccagg acaggtcatg gcccctctct
2821 gggcccagcc catttatcta taccatgagg taactgaagt aaggagagca gtgaatgtca
2881 aactgtgttt cttagagcca taagccccac atattatccc tgaacaaggg cagctcctgc
2941 tttatatatt tgatacgtag gggttccatg agagattttg ggttttaaag gaatggtttt
3001 actgcattaa agaaaaaaaa tgctttggaa accagaggcc tgggtgatgt taaagtctat
3061 cctgtcccac ttcctacatt ctgggactac cgtgaagcct ggagtaggga gagcgagttt
3121 gggagctggg actcggggag tcaaaaatag atgagtaatt gtcaataaac ctgggaacc
//