LOCUS AK001573 3420 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10711 fis, clone NT2RP3000917, highly similar
to 5'-3' exoribonuclease 2 (EC 3.1.11.-).
ACCESSION AK001573
VERSION AK001573.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3420)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3420
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3000917"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000004047"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 86..2938
/codon_start=1
/note="highly similar to 5'-3' exoribonuclease 2 (EC
3.1.11.-)"
/protein_id="BAG50941.1"
/translation="MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPN
DVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAI
DGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCI
TPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQ
PNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDC
EGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDD
WVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMI
MLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPG
SQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDN
VRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPF
HYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSS
IIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGD
VLFVGKHHPLHDFILELYQTGSTEPVEVPPELCHGIQGKFSLDEEAILPDQIVCSPVP
MLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQ
LGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNATPPPVTYQGNLYRPLLRGQAQI
PKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAG
PGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYNWN"
BASE COUNT 1025 a 681 c 783 g 931 t
ORIGIN
1 aagtgctggt gccctctgcc gctgctcccg tctctttggt tacgctcgtc agccggtcgg
61 ccgccgcctc cagccgtgtg ccgctatggg agtcccggcg ttcttccgct ggctcagccg
121 caagtacccg tccatcatag tcaactgcgt ggaagagaag ccaaaagaat gcaatggtgt
181 aaagattcca gttgatgcca gtaaacctaa tccaaatgat gtggagtttg ataatctgta
241 tttggatatg aatggaatca tccatccctg tactcatcct gaagacaaac cagcaccaaa
301 aaatgaagat gaaatgatgg ttgcaatttt tgagtacatt gacagacttt tcagtattgt
361 aagaccaaga agacttctct acatggcaat agatggagtg gcaccacgtg ctaaaatgaa
421 ccagcagcgt tcaaggaggt tcagggcatc aaaagaagga atggaagcag cagtcgagaa
481 gcagcgagtc agggaagaaa tattggcaaa aggtggcttt cttcctccag aagaaataaa
541 agaaagattt gacagcaact gtattacacc aggaactgaa ttcatggaca atcttgctaa
601 atgccttcgc tattacatag ctgatcgttt aaataatgac cctgggtgga aaaatttgac
661 agttatttta tctgatgcta gtgctcctgg tgaaggagaa cataaaatca tggattacat
721 tagaaggcaa agagcccagc ctaaccatga cccaaatact catcattgtt tatgtggagc
781 agatgctgat ctcattatgc ttggccttgc cacacatgaa ccgaacttta ccattattag
841 agaagaattc aaaccaaaca agcccaaacc atgtggtctt tgtaatcagt ttggacatga
901 ggtcaaagat tgtgaaggtt tgccaagaga aaagaaggga aagcatgatg aacttgccga
961 tagtcttcct tgtgcagaag gagagtttat cttccttcgg cttaatgttc ttcgtgagta
1021 tttggaaaga gaactcacaa tggccagcct accattcaca tttgatgttg agaggagcat
1081 tgatgactgg gttttcatgt gcttctttgt gggaaatgac ttcctccctc atttgccatc
1141 gttagagatt agggaaaatg caattgaccg tttggttaac atatacaaaa atgtggtaca
1201 caaaactggg ggttacctta cagaaagtgg ttatgtcaat ctgcaaagag tacagatgat
1261 catgttagca gttggtgaag ttgaggatag catttttaaa aagagaaagg atgatgagga
1321 cagttttaga agacgacaga aagaaaaaag aaagagaatg aagagagatc aaccagcttt
1381 cactcctagt ggaatattaa ctcctcatgc cttgggttca agaaattcac caggttctca
1441 agtagccagt aatccgagac aagcagccta tgaaatgagg atgcagaata actctagtcc
1501 ttcgatatct cctaatacga gtttcacatc tgatggctcc ccgtctccat taggaggaat
1561 taagcgaaaa gcagaagaca gtgacagtga acctgagcca gaggataatg tcaggttatg
1621 ggaagctggc tggaagcagc ggtactacaa gaacaaattt gatgtggatg cagctgatga
1681 gaaattccgt cggaaagttg tgcagtcgta cgttgaagga ctttgctggg ttcttagata
1741 ttattaccag ggctgtgctt cctggaagtg gtattatcca tttcattatg caccatttgc
1801 ttcagacttt gaaggcattg cagacatgcc atctgatttt gagaagggta cgaaaccgtt
1861 taaaccacta gaacaactta tgggggtatt tccagctgca agtggtaatt ttctacctcc
1921 atcatggcgg aagctcatga gtgatcctga ttctagtata attgacttct atcctgaaga
1981 ttttgctatt gatttgaatg ggaagaaata tgcatggcaa ggtgttgctc tcttgccatt
2041 cgtggatgag cgaaggctac gagctgccct agaagaggta tacccagacc tcactccaga
2101 agagaccaga agaaacagcc ttggaggtga tgtcttattt gtggggaaac atcacccact
2161 ccatgacttc attttagagc tgtaccagac aggttccaca gagccagtgg aggtaccccc
2221 tgaactatgt catgggattc aaggaaagtt ttctttggat gaagaagcca ttcttccaga
2281 tcaaatagta tgttctcctg ttcctatgtt aagggatctg acacagaaca ctgtagtcag
2341 tattaatttt aaagacccac agtttgctga agattacatt tttaaagctg taatgcttcc
2401 aggagcaaga aagccagcag cagtactgaa acctagtgac tgggaaaaat ccagcaatgg
2461 acggcagtgg aagcctcagc ttggctttaa ccgtgaccgg aggcctgtgc acctggatca
2521 ggcagccttc aggactttgg gccatgtgat gccaagaggc tcaggaactg gcatttacag
2581 caatgctaca ccaccacctg tgacttacca gggaaactta tacaggccgc ttttgagagg
2641 acaagcccag attccaaaac ttatgtcaaa tatgaggccc caggattcct ggcgaggtcc
2701 tcctcccctt ttccagcagc aaaggtttga cagaggcgtt ggggctgaac ctctgctccc
2761 atggaaccgg atgctgcaaa cccagaatgc agccttccag ccaaaccagt accagatgct
2821 agctgggcct ggtgggtatc cacccagacg agatgatcgt ggagggagac agggatatcc
2881 cagagaagga aggaaatacc ctttgccacc accctcagga agatacaatt ggaattaagc
2941 ttttgtaaag ctttcccaaa tcctttcatc attctacagt tttatgctat ttgtggaaag
3001 atttctttct caagtagtag tttttaataa aactacagta ctttgtgtat ttcttttaac
3061 tgtgtatatt tctactgatc tgatctcact gtttatgttg ctttccaaag atgtatgttg
3121 cataatacag tggatctgaa tttattattg cttataaaac acatttgatg gaataggagt
3181 actggttttt cataatggtt aaaaatgaaa ccagctgtgg atttcaaaac acagtgtatt
3241 ctagatcatc taagatccat gctgattttt attgcacaag aattaggttt gaactcttga
3301 gctggaacct cagcaaacta gagtatatat tgttcagtat ttctttggaa acatttcatt
3361 aatgtacttg tcttacagaa atttctgaac tttagtaaaa aaaaataaag ttaaactttt
//