LOCUS AK001541 3560 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10679 fis, clone NT2RP2006565, moderately
similar to Sus scrofa mRNA for SCAMP1 protein.
ACCESSION AK001541
VERSION AK001541.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3560)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Ishibashi,T., Fujimori,K.,
Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Ishii,S., Kawai,Y.,
Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K.,
Masuho,Y. and Kanehori,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..3560
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2006565"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000004015"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
BASE COUNT 1121 a 543 c 608 g 1288 t
ORIGIN
1 ttcggatgct tggcttggtt ttgtgttgat tctgcaagag cggttgattt tggattgagt
61 atcctgtggt tcttgctttt tactccttgt tcatttgtct gttggtacag accactttat
121 ggagctttca gtggttggat ttcatccctt actggtctca accaaaatat tcctgttgga
181 atcatgatga taatcatagc agcacttttc acagcatcag cagtcatctc actagttatg
241 ttcaaaaaag tacatggact atatcgcaca acaggtgcta gttttgagaa ggcccaacag
301 gagtttgcaa caggtgtgat gtccaacaaa actgtccaga ccgcagctgc aaatgcagct
361 tcaactgcag catctagtgc agctcagaat gctttcaagg gtaaccagat ttaagaatct
421 tcaaacaata cactgttacc ttttgactgt acctttttct ccagttactg tattctacaa
481 atatttttat gttcaaaaca cacagtacag acagcatgga tatttcctgt tcacttgtgc
541 atgggctaaa accaggaaaa cttccttgtc ttattacttt acctaatagt ttcttaatat
601 ttcagtgccc cttgcagaaa aaatattaca tgctaaataa atattctcca tatttttggg
661 ggatgacatt cagtgaatta tttcagtggt gacccactga aaattaataa tggtacttat
721 gattaaaaac gcatttaata ctaactgcag tagttctttc aagaatcttt agagataagg
781 attgcacatt ggaaaagtaa accatgtttc attccttttt ccctatttat attgaaagaa
841 ataggccagc agagacttag ggattttaaa ttggcttgct ttttagctgt ttcagtcacc
901 agtgaagagc ctatgtgcat tttgtagtag ataatgtaaa atttgtcatc tttttctttt
961 ctttttttta gaatagctga tattttgata acaatctcta atttgcatgg gcaccacatt
1021 tcttatatta aaagaattag tgttttggct tctgtactgc ttatggttgt aggattcagg
1081 ggttaatgga atcacagaaa tgatattctg caagaatttc ttttaaataa aaagtttggg
1141 ggtgcaatat aagaagttta tataatatgc agtacattat ccaaaagaga aggtagttaa
1201 tgcagtagaa agtagtggta ataattcctt tttaaaaaaa tttcggtagt catatagtaa
1261 cattttgcta tatgaaaact ttggtatatt ctgtggttac aactaagatt gtgtctggca
1321 gctctttttt ggggatgtgt gtgtgtgatt tttaacagag gtattaaagg ctagcctaac
1381 tgttgtctaa aaagattgta cagtatttaa gggattttcc ttttagcttt tcatctccag
1441 tggcattaaa cataaaaaga ccctggcatt ttttcacata cttgaatccc taaatgcacc
1501 tgtctttcac tttttgagac agactgaata tatctaaaat ttccagcaat aaaaaaaaaa
1561 gcatttaact tgcaccaagc aagaaaatat aaatacagtt aactgcatta agataatcac
1621 gttacaattg ttactatgca gcacagaact tcattcttat agtattcttg ggttcaacct
1681 ttgaatcaat tttaccactg attaaataaa tgactcaaag acatctgtaa gtcatgctgc
1741 tgtgttttga aagtctttaa ctaaattaag attgcagaat gatagtgatt attcaattag
1801 attttaagta aggattgtga tattagagct ggaaatcctt attttttaaa aaatcagata
1861 ggcataaata gttaaatcac tttcattctc cccaaacctg tagttacaga aaaagtttta
1921 tgctagaggt gggatgccaa gttttcacta tccatgaagc agcgctgcat gtcactaggt
1981 aacacagatc catccagatg gtgtttacat ttgatttatt tgggatctta ttgacatcag
2041 gtatacttgg aagacatttc ttttattctt cagcgtatga atttaaagct attttttgta
2101 aatatttcta atcagcgata atttctacct atgttctcaa ccaacttagc cagtttgttt
2161 ttcagagcct gtagtcttat tggaaatcta ttttatcagt gtgctttatt gagtgtggat
2221 tttgcataca ttcaaaacat taaccacaaa atacagcaag tgcacctata ttcaccatta
2281 acttatatcc caagtccatt ttttcctgta cactacaaac aaaagatata ttagagactt
2341 ttgaaaaatg ctgaaatact ttgcttcaga attggaatgt ttatattatg tagaaatctt
2401 caaaggtagc attattaaat agcaaagaat aattagaacc cacatatctt tttttgtgtg
2461 gatggggaaa atgttttaaa atccagttat ttaatatgag tttgagagag aaaattgttt
2521 tttaaaaata tatgtgcatt gaaatgatgg caatgcttat agtatgatca agtatgaaag
2581 gaactttaaa ttcttatatt tacttttctc tcagtaaatt gttaaatttt cactcagcaa
2641 aagattggca tttgttaagt gttctatatt tagtactaaa atcacagtca tgaaatcata
2701 gtcataaaat ggtcttcaca cagcagtcat ccgtgtcatt tatcattttg taatattaaa
2761 ttatggcaat tttatttcaa actaaagttt gaacaccgga aagtcattac tcagtgattt
2821 gtaatttggg acttggatta tttatctaga gatgtttgta tattttgtca gtaactaata
2881 ctgcgctgcc atcatggtga ctgtcatggt tctacagaaa tgccctccat gtgtccctct
2941 aatgttgcat gtttcagtgg gttggaagtt ttgtatattt attgtattaa cacagagtgt
3001 cataaaataa aatgctgttt actggatgtt tgtttgtata attttgaaca ctataatagc
3061 aattcagaga cagacattgt taaaggtttg atgtatatag aaattccatg tttgattttt
3121 taaaatatgt gtataagtct gtcatgtgct aaacaaaata atatgaaaga cctagttaaa
3181 aattctaacc aatgtaaaat gaccattttt ctgttgcatt agacctttac aggtaatgga
3241 acatgagctt cacccatatt aaatattttg gcccctttaa ggtcaaaata cagatcatct
3301 agaagttaga ttcaaaatgg aaaacctatt catggctcag atttttcatt gtgggttaaa
3361 aatgggtgtc tctgtactag tattgtattt attcaattga acttgtattc tgatttctaa
3421 ccttgctacc tattgctgtt ttatgtactg atgaaagtac ctatttgtgt atattggatt
3481 tttcacttgg ttagctaaag aagatgtaaa aatatctaaa ataatgttca tggtgaatct
3541 tattttgaga aatacatgtt
//