LOCUS AK001540 2726 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ10678 fis, clone NT2RP2006472.
ACCESSION AK001540
VERSION AK001540.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2726)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Ishibashi,T., Fujimori,K.,
Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Ishii,S., Kawai,Y.,
Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K.,
Masuho,Y. and Kanehori,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2726
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2006472"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000004014"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 53..2176
/codon_start=1
/protein_id="BAA91747.1"
/translation="MRALHFSSRHNKDIALVHLANVLHRAHFSADAAVVVHAALDDSD
FFTSYYTLGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEAQ
HRSLQRTLNELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNH
QICRLVNQQHSLHCQWDQPVRYHRGDIFENVDYVQFGEDSSTSSMMSVNFDVQSNQSD
INDSVKSSPVAHSILWIWGRDSDAYRDKQHILWPKRADCTESYPRVPVGGELPTYFLP
PENKGLRIHELSSDDYSTEEEAQTPDCSITDFRKSHTLSYLVKELEVRMDLKAKMPDD
HARKILLSRINNYTIPEEEIGSFLFHAINKPNAPIWLILNEAGLYWRAVGNSTFAIAC
LQRALNLAPLQYQDVPLVNLANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAY
LALKNISGALEAFRQALKLTTKCPECENSLKLIRCMQFYPFLYNITSSVCSGNCHEKT
LDNSHDKQKYFDNSQSLDAAEEEPSERGTEEDPVFSVENSGRDSDALRLESTVVEESN
GSDEMENSDETKMSEEILALVDEFQQAWPLEGFGGALEMKGRRLDLQGIRVLKKGPQD
GVARSSCYGDCRSEDDEATEWITFQVKRVKKPKGDHKKTPGKKVETGQIENGHRYQAN
LEITGPKVASPGPQGLLDWKTRKVP"
BASE COUNT 790 a 606 c 594 g 736 t
ORIGIN
1 ttcattttac tggagaatta agaatgagcc atatcaggta gtagaatgtg ccatgcgagc
61 acttcacttc tcttccaggc acaataaaga cattgccctg gtccacctgg caaacgttct
121 acacagagca cacttctctg ctgatgctgc tgtcgtggtc catgcagctc tggatgacag
181 tgacttcttc accagctatt acactttggg gaatatatat gcaatgcttg gggaatataa
241 ccactcagtg ctctgttatg accatgcttt gcaggccaga cctgggtttg agcaagctat
301 aaagaggaag catgctgtcc tatgtcagca aaaactggag cagaaattgg aggctcagca
361 tagatctctc cagcgaacac tgaatgagtt aaaagagtat caaaagcagc atgaccacta
421 cctgagacag caggaaatcc tagaaaaaca taaactgatt caggaggagc aaatcttaag
481 aaatatcatt catgagactc agatggcaaa agaggcacaa ttaggaaatc atcagatatg
541 ccgactggtc aaccagcagc atagtttaca ttgccagtgg gaccagcctg tacgctatca
601 tcgtggagat atctttgaaa atgtggacta tgttcagttt ggtgaggatt catcaacctc
661 cagtatgatg tctgtgaact ttgatgttca atcaaatcag agtgatatca atgattcggt
721 caagtcttct cccgtagccc attctattct ctggatttgg ggcagggact ctgatgcata
781 tagggacaaa cagcatattc tatggcctaa aagagcagat tgtacagaaa gctaccctag
841 agtccctgtt ggtggggaat tgccaacgta ttttctgcct ccggaaaaca aaggactcag
901 gatccacgaa ctcagcagtg atgattattc tacagaagaa gaggcccaaa cccctgactg
961 ttccataact gacttcagaa aaagccacac tctgtcctac ttagtcaaag aattagaggt
1021 tcgcatggat ctgaaagcca aaatgccaga tgaccatgca cgaaaaattt tgctttcccg
1081 tattaataac tatactatcc cagaagaaga aattgggtct ttcttatttc atgctattaa
1141 taagccaaat gctcctatct ggctcatact caatgaagct ggactatact ggagagcagt
1201 aggaaatagc acttttgcta ttgcctgtct tcagagggct ttgaatttag ctccacttca
1261 ataccaagat gttcctcttg tcaacttggc caaccttttg attcattacg gccttcatct
1321 tgatgccact aagctgctac ttcaagcttt ggccatcaat agctctgagc ctctgacctt
1381 tttgagcctg ggaaatgctt accttgctct gaagaatatc agtggggcac ttgaggcctt
1441 tagacaggcc ttgaaattaa ccaccaaatg tccagagtgt gaaaacagcc tgaagttgat
1501 ccgctgtatg cagttttatc cttttctgta caacatcact tcttctgttt gcagtggtaa
1561 ttgtcatgag aaaaccctgg acaacagcca tgacaaacag aaatattttg acaactcaca
1621 gtcactggat gctgctgaag aagagccctc tgagagagga acagaggagg accctgtatt
1681 ctctgttgag aattcaggga gggactcaga tgcccttaga cttgaaagta cggtggttga
1741 ggagagcaat ggttctgatg agatggagaa ttcagatgaa accaaaatgt cagaagaaat
1801 actggctttg gtggatgaat ttcaacaggc atggcctttg gaaggctttg ggggtgcact
1861 agagatgaaa gggcggcgtc tagacttaca aggaatacgg gtgctgaaga aaggtcccca
1921 ggatggagtg gccagaagct cttgctatgg agactgcaga agtgaagatg atgaagcaac
1981 agaatggatt acattccagg tcaaacgtgt aaagaaaccc aaaggagatc ataagaaaac
2041 tcctgggaaa aaagtagaaa caggtcagat agaaaatgga catcgttacc aagcaaacct
2101 agagatcact ggccccaagg tggcatctcc tgggccacaa gggctactag actggaagac
2161 caggaaagtg ccatagacat aatgtaactg gatttcagca aggcatttaa cagagcctct
2221 tatgatatcc ttgtgaacca gatggagaga tgtgggcttg aagccttccc attgcctaca
2281 ggataaaatt caaacttcct agtgtggtgt acaagaccct ttacagcccg cctctgtgta
2341 cccttcaaca ccattctctg aaccaaccat gctcatgttt ttacctcagt gcctttgcac
2401 atgctattcc ctctgcctgg aatgccctgt gccccctctg ccctctgccg tgctaaaata
2461 tcactcatcc ttaaacttca aaatcaagtg ccatctcttc cttgttacct tcaggcagaa
2521 ttagttactc tttcctctgt gcaattgttc tatatctccg ctctagctct tttcctgttg
2581 tattgtaatg atttgtttat gtttaccttc cttactagac tgtgagctca agagcaggcc
2641 gtcttaatta ttcctttctg tacccctagt gtcttttatg gttctcagcc ccttataaca
2701 ggtgctcaat aaatattttt caaatg
//