LOCUS AK001364 2670 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10502 fis, clone NT2RP2000414, highly similar
to Heterogeneous nuclear ribonucleoprotein F.
ACCESSION AK001364
VERSION AK001364.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2670)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2670
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2000414"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000003838"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 403..1650
/codon_start=1
/note="highly similar to Heterogeneous nuclear
ribonucleoprotein F"
/protein_id="BAG50896.1"
/translation="MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVH
FIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP
NSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFA
SQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARR
YIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRY
GDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVE
FATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGL
ESQSVSGCYGAGYSGQNSMGGYD"
BASE COUNT 716 a 570 c 675 g 709 t
ORIGIN
1 gctcgcaggc gggggtttcc atggtgatgg tcaacaagcc tcaactgcct ctgctacaac
61 tgccaagttc cccgcgtccc accctcctct aggtgctcca agggaccacc ggggtgcctg
121 atacgagagc gggagtgtag agactcggag gccgaggttg agaacaaaaa catgcacctg
181 gagtttcccc ggagccctct gcgtggttga gcttcggtgg aatttcgggg ctcttggctg
241 ccagccgcgc ttgcctggta gcaacagaaa ccagtcctgc tcgcctccgt ggacatttca
301 ttaccatcca gaagtgtctc ccactgaagg catccgtggt tgtttttaag ccacaaaaaa
361 gccacaccca agatcacctg acacccaccc tgtcaagtgt ccatgatgct gggccctgag
421 ggaggtgaag gctttgtggt caagctccgt ggcctgccct ggtcctgctc tgttgaggac
481 gtgcagaact tcctctctga ctgcacgatt catgatgggg ccgcaggtgt ccatttcatc
541 tacactagag agggcaggca gagtggtgag gcttttgttg aacttggatc agaagatgat
601 gtaaaaatgg ccctgaaaaa agacagggaa agcatgggac accggtacat tgaggtgttc
661 aagtcccaca gaaccgagat ggattgggtg ttgaagcaca gtggtcccaa cagtgccgac
721 agcgccaacg atggcttcgt gcggcttcga ggactcccat ttggatgcac aaaggaagaa
781 attgttcagt tcttctcagg gttggaaatt gtgccaaacg ggatcacatt gcctgtggac
841 cccgaaggca agattacagg ggaagcgttc gtgcagtttg cctcgcagga gttagctgag
901 aaggctctag ggaaacacaa ggagaggata gggcacaggt acattgaggt gtttaagagc
961 agccaggagg aagttaggtc atactcagat ccccctctga agttcatgtc cgtgcagcgg
1021 ccagggccct atgaccggcc cgggactgcc aggaggtaca ttggcatcgt gaagcaggca
1081 ggcctggaaa ggatgaggcc tggtgcctac agcacaggct acgggggcta cgaggagtac
1141 agtggcctca gtgatggcta cggcttcacc accgacctgt tcgggagaga cctcagctac
1201 tgtctctccg gaatgtatga ccacagatac ggcgacagtg agttcacagt gcagagcacc
1261 acaggccact gtgtccacat gaggggcctg ccgtacaaag cgaccgagaa cgacatttac
1321 aacttcttct ctcctctcaa ccctgtgaga gtccatattg agattggccc agatggaaga
1381 gtgacgggtg aagcagatgt tgagtttgct actcatgaag aagctgtggc agctatgtcc
1441 aaagacaggg ccaatatgca gcacagatat atagaactct tcttgaattc aacaacaggg
1501 gccagcaatg gggcgtatag cagccaggtg atgcaaggca tgggggtgtc tgctgcccag
1561 gccacttaca gtggcctgga gagccagtca gtgagtggct gttacggggc cggctacagt
1621 gggcagaaca gcatgggtgg ctatgactag ttttgttagg aacatttgag ttacttcaat
1681 cattttcaca ggcagccaac aagcaattaa gagcagttat aatagaggaa gctgggggac
1741 ccattttgca ccatgagttt gtgaaaaatc tggattaaaa aattacctct tcagtgtttt
1801 ctcatgcaaa attttcttct agcatgtgat aatgagtaaa ctaaaactat tttcagctct
1861 tctcaattaa cattttggta gtatacttca gagtgatgtt atctaagttt aagtagttta
1921 agtatgttaa atgtggatct tttacaccac atcacagtga acacactggg gagacgtgct
1981 tttttggaaa actcaaaggt gctagctccc tgattcaaag aaatatttct catgtttgtt
2041 cattctagtt tatattttca tttaaaatcc tttaggttaa gtttaagctt tttaaaagtt
2101 agttttgaga attgagacac aatactaata ctgtaggaat tggtgaggcc ttgacttaaa
2161 actttctttg tactgtgatt tccttttggg tgtattttgc taagtgaaac ttgttaaatt
2221 ttttgttaac taaatttttt tcttaaaata aagacttttt cacaatgact ggcacagatt
2281 actcagcaaa agatagcaaa acgggtggtt gaagataatt cattttaatc gtaatgtatt
2341 ttagtgtgaa tttaaaaatt tcatacatca aatctatgat ctcccttata ttcttatgat
2401 gaggctaaat aaaagtctaa taaaaatgtt aaatatgtga atggtggaaa tggtgactag
2461 cagcacacat tctgggaagc atcaaataga cacacggccc cagccacctg caacttatgt
2521 gcactgttgt aaaccattca gaattttcct gctaggccct tgatgctgga gtcacatctg
2581 ttgatagctg gagaacttta gtttcaagta ctacattgtg aaagcaatta ttttgtttct
2641 cgtttttata aaatgctgac ttaaactttt
//