LOCUS AK001346 1429 bp mRNA linear HUM 12-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10484 fis, clone NT2RP2000161, highly similar
to Exosome complex exonuclease RRP44 (EC 3.1.13.-).
ACCESSION AK001346
VERSION AK001346.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1429)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..1429
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2000161"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000003820"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 184..594
/codon_start=1
/note="highly similar to Exosome complex exonuclease
RRP44 (EC 3.1.13.-)"
/protein_id="BAG50895.1"
/translation="MAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIPK
YGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFDKVKVKIMLDSSNLQHQKIR
MSLVEPQIPGISIPTDTSNMDLNGPKKKKMKLGK"
BASE COUNT 487 a 232 c 255 g 455 t
ORIGIN
1 tttcatcact atggcttagc gtctccaata tacacacatt ttacttcacc cattagaaga
61 tacgcagatg tcattgttca tcggcttttg gctgtggcta ttggggctga ctgtacttat
121 ccagagttga cagacaaaca caagcttgca gatatatgta aaaatctaaa tttccggcac
181 aaaatggctc aatatgccca acgtgcatca gtggcttttc atacccagtt attcttcaaa
241 agcaaaggaa tagtaagtga agaagcctat attttatttg taagaaagaa tgccattgtg
301 gtattaattc caaagtatgg tttagaaggg acagtctttt ttgaagaaaa ggacaaacca
361 aacccacagc ttatttatga tgatgagata ccctcactta aaatagaaga tacagtgttc
421 catgtatttg ataaagttaa agtgaaaatc atgttagact catctaatct tcaacatcag
481 aagatccgaa tgtccctggt agaaccacag ataccaggaa taagcattcc tactgatact
541 tcaaacatgg accttaatgg accaaagaaa aagaagatga agcttggaaa atagctatat
601 tcaacaaaaa tcttcaaaga ctggtttctt ttttaaaaga aaaaacttga aagaacactt
661 ctaagcctaa gtgtgtgata cagtttgtta cttttaagta cattttgata atttcagaca
721 tctgcatttt tattgaacag ttgactgtat ctgacccatc atactactat acttctgggt
781 tgaacagaat tatttatgca gaataattca attgaatatc catcacttaa atacagtgac
841 aggacagcaa cttcagggat ctgtaaagat catttaaatg gagtgctcat ctcattgagg
901 agcagattaa ttttgcgtaa gtactttgat tattcaatat ttgtaagaaa aaactttcat
961 tttcctacag aggaaaatag aacaatttta gaagcaagga acaatctctt ttctaagtct
1021 tggaagctgt cagtgttgag gatgtaatct cctttgccat ctttaattca cctaacttac
1081 actaggtgtt ctcttactgt ctttaaaagc ttcctgtatt ttattagtgg tccttgaaaa
1141 actgtgaatg tttgggattt ggtagaaagg caaaaagtag gatattttga cctgactgga
1201 aagatggttg tgtttttatt gccaggtaat aagtgtgatc attgttgaac ttcagctcca
1261 gtgtctctcc agaataagac attggcattc aaatgtctat atcttgttac tacaaagtaa
1321 aaaacagata attagtggct tttaaattgt agttatatca gtgtatatac acgaggggaa
1381 ctgtataaag acatactaaa gggaacagat taaaataagt attattaat
//