LOCUS AK001233 2390 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ10371 fis, clone NT2RM2001903, highly similar
to Homo sapiens ubiquitin protein ligase E3 component n-recognin 4
(UBR4), mRNA.
ACCESSION AK001233
VERSION AK001233.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2390)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sugano,S., Shiratori,A., Sudo,H.,
Wagatsuma,M., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Chiba,Y., Ishida,S., Murakawa,K.,
Ono,Y., Takiguchi,S., Watanabe,S., Kimura,K., Murakami,K.,
Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A.,
Nakamura,Y., Nagahari,K., Masuho,Y., Ninomiya,K. and Iwayanagi,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..2390
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RM2001903"
/clone_lib="NT2RM2"
/db_xref="H-InvDB:HIT000003707"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from uninduced NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 119..2083
/codon_start=1
/note="highly similar to Homo sapiens ubiquitin protein
ligase E3 component n-recognin 4 (UBR4), mRNA"
/protein_id="BAG50874.1"
/translation="MNTLNVMLGTLNLALVAEQESKDSGGAAVAEQVLSIMEIILDES
NAEPLSEDKGNLLLTGDKDQLVMLLDQINGTFVRSNPSVLQGLLRIIPYLSFGEVEKM
QILVERFKPYCNFDKYDEDHSGDDKVFLDCFCKIAAGIKNNSNGHQLKDLILQKGITQ
NALDYMKKHIPSAKNLDADIWKKFLSRPALPFILRLLRGLAIQHPGTQVLIGTDSIPN
LHKLEQVSSDEGIGTLAENLLEALREHPDVNKKIDAARRETRAEKKRMAMAMRQKALG
TLGMTTNEKGQVVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVA
LEELENKPRKQQGYSTVSHFNIVHYDCHLAAVRLARGREEWESAALQNANTKCNGLLP
VWGPHVPESAFATCLARHNTYLQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTG
GGGRESNIHLIPYIIHTVLYVLNTTRATSREEKNLQGFLEQPKGKWVESAFEVDGPYY
FTVLALHILPPEQWRATRVEILRRLLVTSQARAVAPGGATRLTDKAVKDYSAYRSSLL
FWALVDLIYNMFKKVPTSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVE
TFSEFLDVAGLLSEITDPESFLKDLLNSVP"
BASE COUNT 580 a 656 c 639 g 515 t
ORIGIN
1 cagactcgca gggatcagag atttcaagca gggacgccac cttctaacag tgctactgaa
61 attgttcagt tactgcgtga aggtgaaagt caaccggcag caactggtca aactggaaat
121 gaacaccttg aacgtcatgc tggggaccct aaacctggcc cttgtagctg aacaagaaag
181 caaggacagt gggggtgcag ctgtggctga gcaggtgctt agcatcatgg agatcattct
241 agatgagtcc aatgctgagc ccctgagtga ggacaagggc aacctcctcc tgacaggtga
301 caaggatcaa ctggtgatgc tcttggacca gatcaacggc acctttgttc gctccaaccc
361 cagtgtgctc cagggcctgc ttcgcatcat cccgtacctt tcctttggag aggtggagaa
421 aatgcagatc ttggtggagc gattcaaacc atactgcaac tttgataaat atgatgaaga
481 tcacagtggt gatgataaag tcttcctgga ctgcttctgt aaaatagctg ctggcatcaa
541 gaacaacagc aatgggcacc agctgaagga tctgattctc cagaagggga tcacccagaa
601 tgcacttgac tacatgaaaa agcacatccc tagcgccaag aatttggatg ccgacatctg
661 gaaaaagttt ttgtctcgcc cagccttgcc atttatccta aggctgcttc ggggcctggc
721 catccagcac cctggcaccc aggttctgat tggaactgat tccatcccga acctgcataa
781 gctggagcag gtgtccagtg atgagggcat tgggaccttg gcagagaacc tgctggaagc
841 cctgcgggaa caccctgacg taaacaagaa gattgacgca gcccgcaggg agacccgggc
901 agagaagaaa cgcatggcca tggcaatgag gcagaaggcc ctgggcaccc tgggcatgac
961 gacaaatgaa aagggccagg tcgtgaccaa gacagcactc ctgaagcaga tggaagagct
1021 gatcgaggag cctggcctca cgtgctgcat ctgcagggag ggatacaagt tccagcccac
1081 aaaggtcctg ggcatttata ccttcacgaa gcgggtagcc ttggaggagt tggagaataa
1141 gccccggaaa cagcagggct acagcaccgt gtcccacttc aacattgtgc actacgactg
1201 ccatctggct gccgtcaggt tggctcgagg ccgggaagag tgggagagtg ccgccctgca
1261 gaatgccaac accaagtgca acgggctcct tccggtctgg ggacctcatg tccctgaatc
1321 agcttttgcc acttgcttgg caagacacaa cacttacctc caggaatgta caggccagcg
1381 ggagcccacg tatcagctca acatccacga catcaaactg ctcttcctgc gcttcgccat
1441 ggagcagtcg ttcagcgcag acactggcgg gggcggccgg gagagcaaca tccacctgat
1501 cccgtacatc attcacactg tgctttacgt cctgaacaca acccgagcaa cttcccgaga
1561 agagaagaac ctccaaggct ttctggaaca gcccaagggg aagtgggtgg agagtgcctt
1621 tgaagtggac gggccctact atttcacagt cttggccctt cacatcctgc cccctgagca
1681 gtggagagcc acacgtgtgg aaatcttgcg gaggctgttg gtgacctcgc aggctcgggc
1741 agtggctcca ggtggagcca ccaggctgac agataaggca gtgaaggact attccgctta
1801 ccgttcttcc cttctctttt gggccctcgt cgatctcatt tacaacatgt ttaagaaggt
1861 gcctaccagt aacacagagg gaggctggtc ctgctctctc gctgagtaca tccgccacaa
1921 cgacatgccc atctacgaag ctgccgacaa agccctgaaa accttccagg aggagttcat
1981 gccagtggag accttctcag agttcctcga tgtggccggt cttttatcag aaatcaccga
2041 tccagagagc ttcctgaagg acctgttgaa ctcagtcccc tgaccaccac acagcagctg
2101 cggcggcgaa gacgaagctg gcttgccttc caccctctgt tctccctcct tgtgcattaa
2161 gttccctccg cgggatgctg cattgttacc ccgccctccc ctctctcatt tttcttggtg
2221 tggcttgggg tttttaggct tcctgtttta tctcgtgtgt gtggtgcacc agctatgagg
2281 ttgtctgtaa cccaagccat caaagggcct gtacatacct aggagccatg agttgtcccg
2341 gccagcttcg tacttgagtg tgcacatctt gagaaataaa caagtgactt
//