LOCUS AJ890453 1768 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens partial mRNA for collagen, type XXVIII (COL 28 gene), isoform 3. ACCESSION AJ890453 VERSION AJ890453.1 KEYWORDS alternative splicing; COL 28 gene; collagen, type XXVIII. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1768) AUTHORS Kobbe B. JOURNAL Submitted (16-MAR-2005) to the INSDC. Kobbe B., Center for Biochemistry, University of Cologne, Joseph-Stelzmann-Str. 52, Cologne, D-50931, GERMANY. REFERENCE 2 AUTHORS Veit G., Kobbe B., Keene D.R., Paulsson M., Koch M., Wagener R. TITLE Collagen XXVIII, a novel von Willebrand factor A domain-containing protein with many imperfections in the collagenous domain JOURNAL J Biol Chem 281(6), 3494-3504(2006). PUBMED 16330543 FEATURES Location/Qualifiers source 1..1768 /db_xref="H-InvDB:HIT000330192" /organism="Homo sapiens" /mol_type="mRNA" /clone_lib="NCI_CGAP_Ut1" /clone="IMAGE:2493102" /tissue_type="well-differentiated endometrial adenocarcinoma, 7 pooled tumors" /db_xref="taxon:9606" CDS <1..204 /codon_start=1 /gene="COL 28" /product="collagen, type XXVIII" /function="extracellular matrix protein" /note="isoform 3" /db_xref="GOA:Q2UY09" /db_xref="H-InvDB:HIT000330192.9" /db_xref="HGNC:HGNC:22442" /db_xref="InterPro:IPR002035" /db_xref="InterPro:IPR002223" /db_xref="InterPro:IPR008160" /db_xref="InterPro:IPR020901" /db_xref="InterPro:IPR036465" /db_xref="InterPro:IPR036880" /db_xref="UniProtKB/Swiss-Prot:Q2UY09" /protein_id="CAI67597.1" /translation="KGNPGNAQKGEAGERGPGGIPGYKGDKQYSREDREVEHNNEKYV ACLLPSPALLQQSSLTHHGTCSH" mat_peptide 1..201 /gene="COL 28" /product="collagen, type XXVIII" BASE COUNT 516 a 384 c 558 g 310 t ORIGIN 1 aaaggaaacc cgggcaacgc tcaaaaagga gaagctggag aaagaggtcc agggggaatt 61 cctgggtaca agggtgacaa gcaatattct agggaagaca gggaagtaga gcataataat 121 gaaaaatatg tagcatgctt gctgccaagc ccggctctcc tacagcagtc ctcgctaact 181 catcatggca cctgttccca ctaactcacg atgcaatctc acttcagaac ctttctctca 241 cggttctcca ggtgaacact actaggtggt caagggtgaa cgtggggaat gtggtaaacc 301 agggataaaa ggtgacaagg gatccccagg gccatatgga ccaaagggac ccagaggaat 361 tcagggaatt actggacctc caggagaccc aggcccaaag gggtttcaag gcaataaggg 421 tgagccaggt cctcctggtc cttatggttc tccaggagct cctggaattg gacagcaagg 481 tattaaggga gaaagaggcc aagaaggaag accgggagct ccaggaccca ttggagttgg 541 tgagcctgga cagccaggtc cccgtggtcc tgagggagta ccaggagaga ggggcttacc 601 cggagaagga tttccaggac caaagggtga aaaaggttct gaaggaccaa ctggcccaca 661 gggattacaa ggcctgtcaa tcaaagggga caagggggat atgggacctg tgggacccca 721 aggaccaatg ggtatccctg gaatcgggag tcaaggggaa cagggaatcc aaggtcctat 781 tggtccacct ggtccacaag ggcccgcagg acagggctta cctggttcca agggagaagt 841 aggccaaatg ggacctacag gccctcgagg accagtggga attggagtac aaggtccaaa 901 gggagagcca ggctcaatag ggctcccagg acaaccagga gtaccaggag aagatggagc 961 tgcagggaag aagggagaag cggggcttcc gggagcaaga ggcccagaag gaccacctgg 1021 aaaaggacag cctggcccca agggtgacga aggcaagaaa gggagcaaag gaaatcaagg 1081 acagagggga cttccagggc ccgaaggacc aaagggtgaa ccgggcatta tgggcccttt 1141 tggaatgcct ggaacatcaa ttcctggacc acctgggcca aagggagata gaggaggacc 1201 tgggatacct ggatttaagg gagaacctgg actttctatt cgaggaccaa agggtgtcca 1261 aggccctcgg ggaccagtgg gtgctccagg actcaaaggt gatggctatc ctggtgtgcc 1321 tggacctcgt ggattaccag gaccccctgg gccgatgggt ttacgtggag tgggagacac 1381 tggagcaaag ggagagcctg gggtcagagg ccctccaggt ccttctgggc ctcggggcgt 1441 aggaacccaa gggccaaagg gtgatactgg gcagaaaggc ttgcctggcc ctcctggccc 1501 ccctggctat ggatcacagg gaattaaagt aagtgaatag ggttgtgctg gagtcacctc 1561 tgatttcacc agagtgattg ggagaagagg ttgtagataa cgcaaaaatg gctattatga 1621 aatagattta ttgtgagcct cgcagttaaa tggcatccag tgtttagaga catcatctgg 1681 aagtgtaaaa atggtatgag tacaatactt cagcaaatgc taaacattat ataaattgct 1741 tggtgcaaaa gtgaaaaaaa aaaaaaaa //