LOCUS       AJ890453                1768 bp    mRNA    linear   HUM 07-OCT-2008
DEFINITION  Homo sapiens partial mRNA for collagen, type XXVIII (COL 28 gene),
            isoform 3.
ACCESSION   AJ890453
VERSION     AJ890453.1
KEYWORDS    alternative splicing; COL 28 gene; collagen, type XXVIII.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Kobbe B.
  JOURNAL   Submitted (16-MAR-2005) to the INSDC. Kobbe B., Center for
            Biochemistry, University of Cologne, Joseph-Stelzmann-Str. 52,
            Cologne, D-50931, GERMANY.
REFERENCE   2
  AUTHORS   Veit G., Kobbe B., Keene D.R., Paulsson M., Koch M., Wagener R.
  TITLE     Collagen XXVIII, a novel von Willebrand factor A domain-containing
            protein with many imperfections in the collagenous domain
  JOURNAL   J Biol Chem 281(6), 3494-3504(2006).
   PUBMED   16330543
FEATURES             Location/Qualifiers
     source          1..1768
                     /db_xref="H-InvDB:HIT000330192"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /clone_lib="NCI_CGAP_Ut1"
                     /clone="IMAGE:2493102"
                     /tissue_type="well-differentiated endometrial
                     adenocarcinoma, 7 pooled tumors"
                     /db_xref="taxon:9606"
     CDS             <1..204
                     /codon_start=1
                     /gene="COL 28"
                     /product="collagen, type XXVIII"
                     /function="extracellular matrix protein"
                     /note="isoform 3"
                     /db_xref="GOA:Q2UY09"
                     /db_xref="H-InvDB:HIT000330192.9"
                     /db_xref="HGNC:HGNC:22442"
                     /db_xref="InterPro:IPR002035"
                     /db_xref="InterPro:IPR002223"
                     /db_xref="InterPro:IPR008160"
                     /db_xref="InterPro:IPR020901"
                     /db_xref="InterPro:IPR036465"
                     /db_xref="InterPro:IPR036880"
                     /db_xref="UniProtKB/Swiss-Prot:Q2UY09"
                     /protein_id="CAI67597.1"
                     /translation="KGNPGNAQKGEAGERGPGGIPGYKGDKQYSREDREVEHNNEKYV
                     ACLLPSPALLQQSSLTHHGTCSH"
     mat_peptide     1..201
                     /gene="COL 28"
                     /product="collagen, type XXVIII"
BASE COUNT          516 a          384 c          558 g          310 t
ORIGIN      
        1 aaaggaaacc cgggcaacgc tcaaaaagga gaagctggag aaagaggtcc agggggaatt
       61 cctgggtaca agggtgacaa gcaatattct agggaagaca gggaagtaga gcataataat
      121 gaaaaatatg tagcatgctt gctgccaagc ccggctctcc tacagcagtc ctcgctaact
      181 catcatggca cctgttccca ctaactcacg atgcaatctc acttcagaac ctttctctca
      241 cggttctcca ggtgaacact actaggtggt caagggtgaa cgtggggaat gtggtaaacc
      301 agggataaaa ggtgacaagg gatccccagg gccatatgga ccaaagggac ccagaggaat
      361 tcagggaatt actggacctc caggagaccc aggcccaaag gggtttcaag gcaataaggg
      421 tgagccaggt cctcctggtc cttatggttc tccaggagct cctggaattg gacagcaagg
      481 tattaaggga gaaagaggcc aagaaggaag accgggagct ccaggaccca ttggagttgg
      541 tgagcctgga cagccaggtc cccgtggtcc tgagggagta ccaggagaga ggggcttacc
      601 cggagaagga tttccaggac caaagggtga aaaaggttct gaaggaccaa ctggcccaca
      661 gggattacaa ggcctgtcaa tcaaagggga caagggggat atgggacctg tgggacccca
      721 aggaccaatg ggtatccctg gaatcgggag tcaaggggaa cagggaatcc aaggtcctat
      781 tggtccacct ggtccacaag ggcccgcagg acagggctta cctggttcca agggagaagt
      841 aggccaaatg ggacctacag gccctcgagg accagtggga attggagtac aaggtccaaa
      901 gggagagcca ggctcaatag ggctcccagg acaaccagga gtaccaggag aagatggagc
      961 tgcagggaag aagggagaag cggggcttcc gggagcaaga ggcccagaag gaccacctgg
     1021 aaaaggacag cctggcccca agggtgacga aggcaagaaa gggagcaaag gaaatcaagg
     1081 acagagggga cttccagggc ccgaaggacc aaagggtgaa ccgggcatta tgggcccttt
     1141 tggaatgcct ggaacatcaa ttcctggacc acctgggcca aagggagata gaggaggacc
     1201 tgggatacct ggatttaagg gagaacctgg actttctatt cgaggaccaa agggtgtcca
     1261 aggccctcgg ggaccagtgg gtgctccagg actcaaaggt gatggctatc ctggtgtgcc
     1321 tggacctcgt ggattaccag gaccccctgg gccgatgggt ttacgtggag tgggagacac
     1381 tggagcaaag ggagagcctg gggtcagagg ccctccaggt ccttctgggc ctcggggcgt
     1441 aggaacccaa gggccaaagg gtgatactgg gcagaaaggc ttgcctggcc ctcctggccc
     1501 ccctggctat ggatcacagg gaattaaagt aagtgaatag ggttgtgctg gagtcacctc
     1561 tgatttcacc agagtgattg ggagaagagg ttgtagataa cgcaaaaatg gctattatga
     1621 aatagattta ttgtgagcct cgcagttaaa tggcatccag tgtttagaga catcatctgg
     1681 aagtgtaaaa atggtatgag tacaatactt cagcaaatgc taaacattat ataaattgct
     1741 tggtgcaaaa gtgaaaaaaa aaaaaaaa
//