LOCUS       AJ890452                 694 bp    mRNA    linear   HUM 07-OCT-2008
DEFINITION  Homo sapiens partial mRNA for collagen, type XXVIII (COL28 gene),
            isoform 2.
ACCESSION   AJ890452
VERSION     AJ890452.1
KEYWORDS    alternative splicing; COL28 gene; collagen, type XXVIII.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Kobbe B.
  JOURNAL   Submitted (16-MAR-2005) to the INSDC. Kobbe B., Center for
            Biochemistry, University of Cologne, Joseph-Stelzmann-Str. 52,
            Cologne, D-50931, GERMANY.
REFERENCE   2
  AUTHORS   Veit G., Kobbe B., Keene D.R., Paulsson M., Koch M., Wagener R.
  TITLE     Collagen XXVIII, a novel von Willebrand factor A domain-containing
            protein with many imperfections in the collagenous domain
  JOURNAL   J Biol Chem 281(6), 3494-3504(2006).
   PUBMED   16330543
FEATURES             Location/Qualifiers
     source          1..694
                     /db_xref="H-InvDB:HIT000330191"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /clone_lib="NCI_CGAP_GC6"
                     /clone="IMAGE:2308497"
                     /tissue_type="pooled germ cell tumors"
                     /db_xref="taxon:9606"
     CDS             <1..393
                     /codon_start=1
                     /gene="COL28"
                     /product="collagen, type XXVIII"
                     /function="extracellular matrix protein"
                     /note="isoform 2"
                     /db_xref="GOA:Q2UY09"
                     /db_xref="H-InvDB:HIT000330191.8"
                     /db_xref="HGNC:HGNC:22442"
                     /db_xref="InterPro:IPR002035"
                     /db_xref="InterPro:IPR002223"
                     /db_xref="InterPro:IPR008160"
                     /db_xref="InterPro:IPR020901"
                     /db_xref="InterPro:IPR036465"
                     /db_xref="InterPro:IPR036880"
                     /db_xref="UniProtKB/Swiss-Prot:Q2UY09"
                     /protein_id="CAI67596.1"
                     /translation="GMPGTSIPGPPGPKGDRGGPGIPGFKGEPGLSIRGPKGVQGPRG
                     PVGAPGLKGDGYPGVPGPRGLPGPPGPMGLRGVGDTGAKTLNTSHGLEDPSCPDCSFC
                     HFSLAADIQPKWPALLQLIPASGTRQDG"
     mat_peptide     <1..390
                     /gene="COL28"
                     /product="collagen, type XXVIII"
     regulatory      654..659
                     /regulatory_class="polyA_signal_sequence"
BASE COUNT          182 a          178 c          158 g          176 t
ORIGIN      
        1 ggaatgcctg gaacatcaat tcctggacca cctgggccaa agggagatag aggaggacct
       61 gggatacctg gatttaaggg agaacctgga ctttctattc gaggaccaaa gggtgtccaa
      121 ggccctcggg gaccagtggg tgctccagga ctcaaaggtg atggctatcc tggtgtgcct
      181 ggacctcgtg gattaccagg accccctggg ccgatgggtt tacgtggagt gggagacact
      241 ggagcaaaga ctttgaacac ttcccatggc cttgaagatc cttcatgccc cgactgcagc
      301 ttctgtcatt tctccctggc tgccgacatt cagccaaaat ggcctgccct acttcagctc
      361 attcctgcat cagggactcg ccaggatggc tgattattaa aagcttagct caaatgtcac
      421 ctccccgacc acccatacag aaagcattac taccccaacc cctctgtatg ttttccatgt
      481 agcgtgtatc actttctgag atcatcttcc tcatttattt ctctgcatat tccatgagag
      541 tgaaggtttt cctggagcag gcttcttgct ttgttccctc ctaacttcat gtcaccagaa
      601 ctaggtgtac cattcagtag gagctctaca acctgttgaa tgaatggaaa atgaataaat
      661 gatcaatatt accctaaaaa aaaaaaaaaa aaaa
//