LOCUS AJ745101 2622 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for Na+/Ca2+ exchanger 3, variant NCX3-tN.1
(SLC8A3 gene).
ACCESSION AJ745101
VERSION AJ745101.1
KEYWORDS alternative splicing; Na+/Ca2+ exchanger 3; SLC8A3 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2622)
AUTHORS Zhao J.
JOURNAL Submitted (03-JUN-2004) to the INSDC. Zhao J., Dept of Oncology &
Pathology, CCK, Karolinska Institute, CCK, R8:05, Karolinska
Hospital, Stockholm, SE-171 76, SWEDEN.
REFERENCE 2
AUTHORS Lindgren R.M., Zhao J., Heller S., Berglind H., Nister M.
TITLE Molecular cloning and characterization of two novel truncated
isoforms of human Na+/Ca2+ exchanger 3, expressed in fetal brain
JOURNAL Gene 348, 143-155(2005).
PUBMED 15777725
FEATURES Location/Qualifiers
source 1..2622
/db_xref="H-InvDB:HIT000249397"
/organism="Homo sapiens"
/chromosome="chromosome 14"
/mol_type="mRNA"
/dev_stage="foetus"
/clone="PL10"
/tissue_type="brain"
/db_xref="taxon:9606"
CDS 240..1094
/gene="SLC8A3"
/product="Na+/Ca2+ exchanger 3"
/note="NCX3-tN.1 variant"
/db_xref="GOA:P57103"
/db_xref="H-InvDB:HIT000249397.13"
/db_xref="HGNC:HGNC:11070"
/db_xref="InterPro:IPR003644"
/db_xref="InterPro:IPR004836"
/db_xref="InterPro:IPR004837"
/db_xref="InterPro:IPR032452"
/db_xref="InterPro:IPR038081"
/db_xref="UniProtKB/Swiss-Prot:P57103"
/protein_id="CAG33739.1"
/translation="MEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKTTVDKLIKKT
NLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVLFAC
VPPTEYCHGWACFAVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTSVPD
TFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALQGQEFHVSAGTL
AFSVTLFTIFAFVCISVLLYRRRPHLGGELGGPRGCKLATTWLFVSLWLLYILFATLE
AYCYIKGF"
BASE COUNT 661 a 657 c 631 g 673 t
ORIGIN
1 cgaaaaccta gggaatgaca gctagaggca ttcagacgat aactggcagc caggagggtg
61 gataagtcaa aggaaggggt caaggaaaga ggggaaggaa agggaaccat cacttgctga
121 gcctgctgcc tgtgcttcct catgtcaccc gcacgacaac ccaatgtgaa tgttatcatc
181 tccaggtaac tgctgaagaa acggaagctc aaagagatgt gacagacagg aagctgacta
241 tggaagaaga ggaggccaag aggatagcag agatgggaaa gccagtattg ggtgaacacc
301 ccaaactaga agtcatcatt gaagagtcct atgagttcaa gactacggtg gacaaactga
361 tcaagaagac aaacctggcc ttggttgtgg ggacccattc ctggagggac cagttcatgg
421 aggccatcac cgtcagtgca gcaggggatg aggatgagga tgaatccggg gaggagaggc
481 tgccctcctg ctttgactac gtcatgcact tcctgactgt cttctggaag gtgctgtttg
541 cctgtgtgcc ccccacagag tactgccacg gctgggcctg cttcgccgtc tccatcctca
601 tcattggcat gctcaccgcc atcattgggg acctggcctc gcacttcggc tgcaccattg
661 gtctcaaaga ttcagtcaca gctgttgttt tcgtggcatt tggcacctct gtcccagata
721 cgtttgccag caaagctgct gccctccagg atgtatatgc agacgcctcc attggcaacg
781 tgacgggcag caacgccgtc aatgtcttcc tgggcatcgg cctggcctgg tccgtggccg
841 ccatctactg ggctctgcag ggacaggagt tccacgtgtc ggccggcaca ctggccttct
901 ccgtcaccct cttcaccatc tttgcatttg tctgcatcag cgtgctcttg taccgaaggc
961 ggccgcacct gggaggggag cttggtggcc cccgtggctg caagctcgcc acaacatggc
1021 tctttgtgag cctgtggctc ctctacatac tctttgccac actagaggcc tattgctaca
1081 tcaaggggtt ctaagccaca caacagagcc tccagcaggg caggcctagg acttctccta
1141 agagaagggc acttccccac cagtgatctc tcccgactgc actgccctgg agaggcagca
1201 tcaggaccta agccccagga acttcaccca acttaggccc tggcaattaa ctgaaagggc
1261 aaagtcttaa tcaatcaaac aatggaggaa tcaccgactt tacacagtat ttaattgaat
1321 acaaacaagc aacagcaaca aatccacctc caccccatct ccccctcata tccctgaccc
1381 aaagcaaagg tcagagcctt tcgcctcctt ctattccatc ttttgattat tcctttgcct
1441 ctcatttctt tggaagcagg gtttctcctc tctgcccaat tccatatgtc cctattatct
1501 cactcagctg acaagacgtg aaaatgagtc acattcatgt ggctggggtg gggttctttt
1561 ttcattgtaa tcattattgt ggttgctttc gttttgccat taggttttgc ttattatttt
1621 gttttgtctt ttttttctga agtgggtgaa aaaggtgcca caaaggaatt ccaggtccga
1681 gccaccagag agaaacatga atttttagac acatgctctc ctgccacctc ttggctccat
1741 caagatccag ttccccatct cactgttttc tctgagttct tgggaggagt gatggtgttg
1801 gggtagaaat aagctcactc acccacgcag ggtactaaag atcttacagg agcttcaact
1861 ggagcaggag gagcttttta tgcttatgtt gaatcaagtc agatacaaaa agcaattgtc
1921 cctctttgcc caagcctttc caattctgtg tgtcttgttg tgtcagtgtc cacttgtgta
1981 tccttctgca ggaagacccg ccaaatagaa gagatgggac aaaaatagga atggtgtgtg
2041 acgacaaagg gctactggaa gaacaaaagg gatacaggcc ttcttgatta tctttggctt
2101 tgtacctgag gcaggagaga agagatgtcc aaccagtgag atctttaaga gaaaagtttg
2161 tattttaaat gtcaatgtgc ctgagaaatg tcagcttcac cacgctcttg cttcctaatg
2221 ctctatacaa agagggctga ctatatttct tgaagtggtg taaaaactta gagattttat
2281 aagagaacca ggggctccct tcacctctcc tggtccctca ggtcacatat gaaagcattt
2341 ttacaagata ggaactggaa ttcctcattt ctcccatgtt cctgcttgtt cttaaacttc
2401 atgaagctat ttttccagtc tatggggtag ttcttgctcc agtaagagga atcttagttg
2461 tcataatccc ttggagcctg ggtttttgga gaaagagatc tccgtgccct acagaccttt
2521 tctcaacgaa tgtgggaagg acctggcttt aaaacacgcg cacaaacaca caaataacca
2581 ggcataagat gtcatcgcga aactgaacac ggatctttag gc
//