LOCUS AJ720620 3492 bp mRNA linear VRT 12-JAN-2005
DEFINITION Gallus gallus mRNA for hypothetical protein, clone 21m6.
ACCESSION AJ720620
VERSION AJ720620.1
KEYWORDS ORF1.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
REFERENCE 1 (bases 1 to 3492)
AUTHORS Caldwell R.B.
JOURNAL Submitted (20-MAY-2004) to the INSDC. Caldwell R.B., GSF -
Forschungszentrum, Institut fuer Molekulare Strahlenbiologie,
Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
REFERENCE 2
AUTHORS Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J.,
Fiedler P., Kutter S., Blagodatski A., Kostovska D., Koter M.,
Plachy J., Carninci P., Hayashizaki Y., Buerstedde J.M.
TITLE Full-length cDNAs from chicken bursal lymphocytes to facilitate
gene function analysis
JOURNAL Genome Biol. 6(1), R6-R6(2005).
PUBMED 15642098
FEATURES Location/Qualifiers
source 1..3492
/organism="Gallus gallus"
/strain="CB"
/mol_type="mRNA"
/dev_stage="2 weeks old"
/clone_lib="riken1"
/clone="21m6"
/cell_type="lymphocyte"
/tissue_type="bursa"
/db_xref="taxon:9031"
5'UTR <1..50
/locus_tag="RCJMB04_21m6"
CDS 51..1610
/locus_tag="RCJMB04_21m6"
/product="hypothetical protein"
/note="ORF1"
/db_xref="GOA:Q5ZJ14"
/db_xref="InterPro:IPR000582"
/db_xref="InterPro:IPR009038"
/db_xref="InterPro:IPR014352"
/db_xref="InterPro:IPR022408"
/db_xref="InterPro:IPR035984"
/db_xref="InterPro:IPR036598"
/db_xref="UniProtKB/TrEMBL:Q5ZJ14"
/protein_id="CAG32279.1"
/translation="MAAALSAERLEVSVDGLTLSPNAEAPPCEARPGHGDSAAGRNRA
GPGCPSQAEAGGEEAAALSPERRWGFALEELYGLALRFFKEKDGKAFHPTYEEKLRLV
ALHKQVLLGPYNPDTCPEVGFFDVLGNDRRKEWAALGNMSKQEAMTEFVKLLNRCCHL
FSTYVTSHKIEKEEQEKKRREEEERRRREEEELERLQKEEEKRRQEEEERLRREEEER
RRIEEERLRMEQQKQQIMAALNSQTAMQFQQYAAQQYPGNYEQQQILIRQLQEQHYQQ
YMQQLYQVQLAQQQAALQKQQEAVVAAAGTPLTTASKVNVPAQGDMPSINGQASAHTD
NPEKELDPEALEEALENGPKDSVPVIAAPSMWARPQIKDFKEKIRQDADSVITVGRGE
VVTVRVPTHEEGSYLFWEFATDSYDIGFGVYFEWTDSPNTAVSVHVSESSDDEDEEEE
NASSEEKAKKNANKPQLDEIVLVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRS
KTVYYRVYYTR"
3'UTR 1611..>3492
/locus_tag="RCJMB04_21m6"
BASE COUNT 986 a 694 c 905 g 907 t
ORIGIN
1 gtcggaggga acgggaagtc gggacgtggc cgccgcagcg gagccggagg atggcggcgg
61 ctctgagcgc ggagcggttg gaggtgtcgg tggacgggtt gacgctgagt cccaacgccg
121 aggcgccgcc ctgcgaagcg cggcccggcc acggggattc ggccgcgggg cggaaccgag
181 cgggccccgg ctgcccgagt caggcggagg ccggcgggga ggaggcggcg gcgctgagcc
241 cggagcggcg ctggggcttc gcgctggagg agctgtacgg cctggcactg cgcttcttca
301 aggaaaaaga tggcaaagcc tttcatccaa catatgaaga aaaactcaga cttgtggcac
361 tgcacaagca ggttctgctg ggaccttaca accctgatac ttgccctgaa gttgggttct
421 ttgatgtgct ggggaatgat agaaggaagg aatgggctgc ccttggaaac atgtcgaagc
481 aagaagctat gacagaattt gttaagctcc taaataggtg ctgccacttg ttctcaacgt
541 atgttacttc tcacaagata gaaaaagaag aacaagaaaa gaaaagaaga gaggaggagg
601 aacgaaggcg ccgtgaagaa gaggagcttg agcggttaca gaaagaagaa gaaaaacgca
661 ggcaagaaga agaagagagg ctgagaagag aggaagagga gaggaggaga atagaggagg
721 agcggcttcg gatggaacag caaaagcaac agatcatggc agcactcaac tcccagactg
781 ccatgcagtt ccagcagtat gctgctcagc agtatcccgg caactatgaa cagcagcaga
841 tcctcattcg acagctccaa gagcagcact atcaacagta catgcagcag ttgtatcaag
901 tccagcttgc acagcaacag gcagccttgc agaaacagca ggaggcagtt gtggcagcag
961 cagggacacc tctgactact gcatccaagg tgaatgtacc tgcccaaggg gatatgccgt
1021 ctattaatgg gcaagccagt gcacacacag acaaccctga aaaggagctg gatccagagg
1081 ctttggaaga agcattggag aatggaccaa aagattctgt tccagtgata gctgctccat
1141 cgatgtgggc acgaccccag ataaaagact tcaaagagaa aatccggcag gatgcagact
1201 ctgtgatcac agtgggccga ggggaagtgg ttacagttag agtaccaact catgaagagg
1261 ggtcttacct cttttgggag tttgctacag acagttatga cattggtttt ggggtgtatt
1321 ttgaatggac agactcccct aatactgcag tgagtgtgca tgtcagcgaa tccagtgatg
1381 atgaggatga agaggaagaa aatgctagca gtgaagaaaa agccaaaaag aatgccaaca
1441 agcctcagct agatgaaata gtgcttgtgt acagacgaga ctgtcatgaa gaagtgtatg
1501 ctggcagcca ccagtaccca gggagaggag tttatctcct gaaatttgac aactcctact
1561 ctctatggcg gtcaaaaaca gtttactaca gagtttatta tactagataa gtatggctgt
1621 gtttgaggct gggctgtgca gaagatgtcg ttttatttgg aaatttcttc aagcataatg
1681 gatccttttg agtctgtctt agcctgtctg tatctgtatg gtttgtgtga actttaacaa
1741 gtaaacactg ggatcttcct gctccatgac actaatgcat attgcattgg gcttaacaca
1801 ggatctccct agccctttgg ggtattggag ttaaccaatg gcaatcattg gctccagtgc
1861 ttaaggtcac atcagctgta tttgttaagg cctcgtgtaa aaaaggggga ggggatcact
1921 agttcactgg ctgggtgatc cgaggtttcc aagtctggat gctttcaata acttgttaac
1981 agttaattta aaggtcccat cagtaaccgg tagatttgga tgcagtttgc tgtgtagcaa
2041 gtttctctta actgtaatca aatgtcagat ttttacacca ttaaaactta aaatttcagt
2101 tgatgcaagt ttagaaacaa gttgtctcga gtctgtcctc atcaaagaag aaacattcag
2161 ttccttaaac cagtgtaagc tttaggcaag gacgatcaac gtcttgaaag tacagcaggt
2221 aacctcttct gaagacacaa actgcaggac agttgtaagt atacgtaaca agtagaacct
2281 taatctctgc cctgctgtta accgtagaac gtctttggag gtagctggct ttgaaatagg
2341 gcacaaactg tttataagtt tgggtttttc atggagtaga cttaaaaaaa aaatctgcac
2401 aactctttgg attgttcttt gtaaaacctg aataagcgtg ttgtgcatct gaagagcagg
2461 aagtcacttg gaagtgtaga aattagtgtt gcactaacta tggaaatcac tgccagtcca
2521 ttcgaatctg agctggtggg gctttggtgc tgactttctg ctttagtctg taactgtctg
2581 cagaaagcca ggatgcactt acagacactt aatgtagctt tcatctcagt ctcgtatggt
2641 ttgaatggct tggttagggc ttttcttgtt ttttgtaact gaaaaatgca ggtggctgtt
2701 tgagaacacg gtaaatatcc tctctccttg gagccttgtg cccatggggt gatgtgttac
2761 gatgatgact tgtggaaggg ctctctgcat cagcagtgca ctttgttacc aaaaggaatc
2821 ggaatgggtt acttgaggtc cgtcagattg gtttctgcag taagatttcc attggttagc
2881 tgcagcatgt acagttccac agcaaatggt gttgagtttg gggcttttgt tagaataatc
2941 gctttgtaca tacatgatat tttactttac tcataccaac catggagata cttctcctag
3001 agtgcttaac ttgtcatcct gcgtttggtt cagcaacacc gtaccagctt gtagctagtt
3061 agtgctgctt tatccaaaac actgtacaat gttctgccct tgtgtacata cagtatataa
3121 accatgaatt tagaaagtac tttgctttta aagaaagaaa tgtatttaat gtaaaaacga
3181 aaaaaaaacc acccccgatc ttttaaagaa ggcaggcact aatatatttc ttccagtctt
3241 gggtttagat ttttgtccat acgaaaatgt tacagctttt ttcctctgaa gagtatctgt
3301 ccttggaagc ggtgtttgtc gctttccgtg gcagcacttc ctgtcatgtc tcgatgtgaa
3361 acttttacgt tttcaaactt ttttaattgc ctctggctgt tggttagtac agtacaagtg
3421 cgatttcaag ataccctgag atagtattta atcctaatta aaatacattt atctataaaa
3481 aaaaaaaaaa aa
//