LOCUS AJ719426 3177 bp mRNA linear VRT 12-JAN-2005
DEFINITION Gallus gallus mRNA for hypothetical protein, clone 2c19.
ACCESSION AJ719426
VERSION AJ719426.1
KEYWORDS ORF1.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
REFERENCE 1 (bases 1 to 3177)
AUTHORS Caldwell R.B.
JOURNAL Submitted (20-MAY-2004) to the INSDC. Caldwell R.B., GSF -
Forschungszentrum, Institut fuer Molekulare Strahlenbiologie,
Ingolstaedter Landstr. 1, D-85764 Neuherberg, GERMANY.
REFERENCE 2
AUTHORS Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J.,
Fiedler P., Kutter S., Blagodatski A., Kostovska D., Koter M.,
Plachy J., Carninci P., Hayashizaki Y., Buerstedde J.M.
TITLE Full-length cDNAs from chicken bursal lymphocytes to facilitate
gene function analysis
JOURNAL Genome Biol. 6(1), R6-R6(2005).
PUBMED 15642098
FEATURES Location/Qualifiers
source 1..3177
/organism="Gallus gallus"
/strain="CB"
/mol_type="mRNA"
/dev_stage="2 weeks old"
/clone_lib="riken1"
/clone="2c19"
/cell_type="lymphocyte"
/tissue_type="bursa"
/db_xref="taxon:9031"
5'UTR <1..542
/locus_tag="RCJMB04_2c19"
CDS 543..1895
/locus_tag="RCJMB04_2c19"
/product="hypothetical protein"
/note="ORF1"
/db_xref="GOA:Q5ZMF8"
/db_xref="InterPro:IPR010561"
/db_xref="InterPro:IPR033471"
/db_xref="UniProtKB/TrEMBL:Q5ZMF8"
/protein_id="CAG31085.1"
/translation="MSTPDKKASQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDKPLFE
GDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKI
RLLQQRKVADISQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIEAVDTLNATYR
VTFDRAGLGTQTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRLHYTPSLQSPI
TDSDPLLGQSSWKNKISGTDSETLGGFPVEFLIQVTRLSKILMIKKEHIKQLREMNTE
AEKLKSYSMPISIEFQRRYATIVLDLEQLNKDLNKVLHKVQQYCYELAPDQGLQPADQ
PTDLRRRCEEEAQEIVRQANSSTTGQLCVESENLTDLISRLTAILLQIKCLAEGGDLN
SFEFKSLTDSLNDIKNSIDSSNISCFQNNVEIHVAHIQSGLSQMGNLHAFAANNTNRD
"
3'UTR 1896..>3177
/locus_tag="RCJMB04_2c19"
BASE COUNT 1039 a 570 c 657 g 911 t
ORIGIN
1 acaatgcacc gcgccaggca gcctttgaaa aagcggcgcg gctcgttcaa gatggcggag
61 ctcgatcagc tgcctgacga gaagagtcat ttgctgattg cggagcatga ggacagtggt
121 gaggcctagc ttttactttt cttacccaga accactgcag aggtcttaca gatgccattc
181 aagaggagca gtgaagttct gatggatgca ctgcacaatt tgaaaactga aaacaaagca
241 aggattgagt ctacatttct aattcctgaa gctgctgcaa ggaggttctt cagcaaaagc
301 actcgtgagc ttgaaagagg gaagtttgtc caatacatgg aatgaaaaat ataattcact
361 gcagaaaact cccatttgga aaagcaagaa tgctgcctct actgtggaaa tgcccttcag
421 aaattcaaaa cggagtcgac tcttctgtga agaagatgac agacaaataa acacaaggtc
481 acccaaaaga aatcagaagg ttgtgatggt tccacaggta cctacataag ttcaatacaa
541 cgatgtcgac accagacaag aaagcttcac agaagattgg tttacggctt cgtaacctgc
601 tcaaacttcc caaagctcac aagtggtgca tatatgaatg gttctattct aatatagata
661 aaccgctatt tgaaggagac aatgatttct gtgtatgcct gaaggaatct tttccaaact
721 tgaaaaccag aaaattgaca agagttgaat ggggaaaaat cagacgatta atgggaaaac
781 cacggaggtg ctcctctgcg ttctttgaag aggaaagatc agcattaaaa cagaagcggc
841 agaaaataag acttttgcag cagcgtaagg ttgcagatat ttcacagttc aaagatcttc
901 cagatgaaat tccattaccc cttgtaatag gaacaaaagt tacagcacga ttgcgaggtg
961 tccatgatgg gctattcaca ggacagatag aagcagtaga cactcttaac gctacgtaca
1021 gagtcacttt tgacagggca ggtcttggaa cacaaacgat cccagattat gaagttctta
1081 gtaacgaacc tcatgaaacc atgccaattg ctgcctttgg gcagaaacag cggccttcta
1141 ggttctttat gacccctccc cggctgcatt atacgccttc gctccagtct ccaattacag
1201 acagtgaccc tttattagga cagtcatcat ggaaaaacaa aatttcaggc acagacagtg
1261 aaacactagg tggctttcca gtagagttcc tcattcaagt gaccaggtta tcgaaaatcc
1321 ttatgatcaa gaaggaacac atcaaacagt taagagagat gaatacagaa gcagaaaagc
1381 tgaaatccta ttctatgcca ataagcattg agtttcagag gagatatgct actattgttc
1441 tagatctaga acaactaaac aaagacttaa ataaagtgtt gcataaagtt cagcagtatt
1501 gttacgagct tgctccagac caaggcctcc agcccgcaga ccagccaaca gatctgaggc
1561 ggaggtgtga agaggaggct caggaaattg ttaggcaagc aaattcctcc acaacgggac
1621 agctttgtgt cgaaagtgaa aatttaactg accttatctc tagacttaca gcaatattac
1681 tgcagattaa gtgtctagca gaaggaggtg acctgaattc ctttgaattt aaatcactaa
1741 cagattcatt aaatgacatt aagaattcaa tagattcctc aaatatcagt tgttttcaga
1801 ataatgttga gatccatgtt gcacatattc agagtggcct gagccagatg ggaaatttac
1861 atgcctttgc agctaataac accaacagag actgaaaacg ttctttcaag tgtacagcaa
1921 gtagttctgg aaaatcctct tcatttatat atgcttcaac aaatacccta actaccagaa
1981 gataagggaa aagaagacct ctcagaccct ttttaaatac attatatttg cttcttaagg
2041 aaaccagcat tactggcaag cattacatta gatttctcca tttgttattc acatgcagta
2101 gttttgctaa ctggtaacct tagtaattgc atttattata ataaacctga aaacgtactt
2161 tcatataatt tgaacttagt ttttaaaagt tcagattaat tctgcccacc tcttgttgtt
2221 ggctctcctg gtatgttaga tgaagtgatg aagaggaaat ggctcacgtc agtagctgtg
2281 tggcagtctt tgttccttaa agctgcactt ctctaggtac ctgagatgcc accagctagc
2341 atggtgatag catgggctga gtgttccggg tctaaagaag cagcgatggg atgtggacag
2401 agaactaaag ttgcagaaga tgttgggcag gtctatggat cagtcagtgt cttgttggaa
2461 catttaattt atcataattt atataagaag tctaatgaag gaatataaga atggaactga
2521 tacctttcca gaaacagagt cgttatggct ttttcccttt gtgtggggca aaaagtgttt
2581 tagttggtat tttatataaa tgagtgataa aacatactgt ttttccaact tttggtttgt
2641 tttgcacaac ttttaaatta gattcctggt tatctgacat acccaacata tagaaatatg
2701 aagattttta taataaaata taaccagtga ggtaaactgc aaaaatgaaa agtgacaacc
2761 tgcctatgag tacattttgg aatgttaatc ttgtaaaaag tgtgtattgg tttgtttaaa
2821 tagtcttgta aagcttctgt gtaatgaatc atttccagat atggattttc agagatagct
2881 gtagagttgt tttggattcc tttagatgcc tcattaaatg aggtctttta tatgttaatg
2941 tataaagaat atgtaaacag gattattttc gattttaaaa ttttgtatag tttaaagatg
3001 cttctgtatt ctgtgttggt attgtgccac tgcaaaactt tagtgcagag tttatattta
3061 gctaaacttg ttctgttaat taagagaaat gcataaatct tttattctcg gtgaaatttg
3121 taactgaata aattgaacta taagagttga tatatttcac aaaaatgcga aaaaaaa
//