LOCUS AJ616791 117 bp mRNA linear HUM 14-NOV-2006 DEFINITION Homo sapiens c-myb gene for v-myb myeloblastosis viral oncogene homologue (avian), exon 1 and joined CDS. ACCESSION AJ616791 VERSION AJ616791.1 KEYWORDS c-myb gene; v-myb myeloblastosis viral oncogene homologue (avian). SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 117) AUTHORS Close J.P. JOURNAL Submitted (15-OCT-2003) to the INSDC. Close J.P., Molecular Haematology, King's College London, GKT School of Medicine, King's Denmark hill campus, Bessemer Road, London, SE5 9PJ, UNITED KINGDOM. REFERENCE 2 AUTHORS Close J.P., Game L., Clark B., Berginoux J., Gerovassili A., Thein S. TITLE Genome annotation and mutation analysis of a 1.5Mb region of 6q23 encompassing a Quantitative Trait Locus for foetal haemoglobin expression JOURNAL Unpublished. FEATURES Location/Qualifiers source 1..117 /db_xref="H-InvDB:HIT000249233" /organism="Homo sapiens" /chromosome="6" /map="6q23" /mol_type="mRNA" /db_xref="taxon:9606" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..1305) mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..229,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..1305) /note="alternative" /note="splice variant 8A" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..98,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..1305) /note="alternative" /note="splice variant 8'" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..98,AJ616798.1:108..229, AJ616799.2:1..255,AJ616800.1:1..143,AJ616801.1:1..115, AJ616802.1:1..126,AJ616803.1:1..111,AJ616804.1:1..108, AJ616805.1:1..1305) /note="alternative" /note="splice variant 8B" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..438, AJ616800.1:1..199,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..1305) /note="alternative" /note="splice variant 9Ai" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616799.2:439..801,AJ616800.1:1..199,AJ616801.1:1..115, AJ616802.1:1..126,AJ616803.1:1..111,AJ616804.1:1..108, AJ616805.1:1..1305) /note="alternative" /note="splice variant 9Aii" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..199,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..1305) /note="alternative" /note="splice variant 10A" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..369,AJ616804.1:1..108,AJ616805.1:1..1305) /note="alternative" /note="splice variant 13A" mRNA join(1..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..343,AJ616805.1:1..1305) /note="alternative" /note="splice variant 14A" exon 1..117 /gene="efg" /number=1 CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..117) /db_xref="GOA:Q708E9" /db_xref="H-InvDB:HIT000249233.12" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E9" /protein_id="CAF04477.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIAD HTRPHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEF AETLQFIDSFLNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTVF RTPAIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPSHLVEDLQDVIKQESDE SGIVAEFQENGPPLLKKIKQEVESPTDKSGNFFCSHHWEGDSLNTQLFTQTSPVADAP NILTSSVLMAPASEDEDNVLKAFTVPKNRSLASPLQPCSSTWEPASCGKMEEQMTSSS QARKYVNAFSARTLVM" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..212) /note="alternative" /note="splice variant 8A" /db_xref="GOA:Q708E8" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E8" /protein_id="CAF04478.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPLCGPLLNSDIFSDWAANW DGSLCFATYIVNQQRQ" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..98,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..108,AJ616805.1:1..117) /note="alternative" /note="splice variant 8'" /db_xref="GOA:P10242" /db_xref="HGNC:HGNC:7545" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/Swiss-Prot:P10242" /protein_id="CAF04479.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQTQNHTCSYPGWHSTTIADHTR PHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEFAET LQFIDSFLNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTVFRTP AIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPSHLVEDLQDVIKQESDESGI VAEFQENGPPLLKKIKQEVESPTDKSGNFFCSHHWEGDSLNTQLFTQTSPVADAPNIL TSSVLMAPASEDEDNVLKAFTVPKNRSLASPLQPCSSTWEPASCGKMEEQMTSSSQAR KYVNAFSARTLVM" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..98,AJ616798.1:108..212) /note="alternative" /note="splice variant 8B" /db_xref="GOA:Q708E6" /db_xref="HGNC:HGNC:7545" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E6" /protein_id="CAF04480.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQLCGPLLNSDIFSDWAANWDGS LCFATYIVNQQRQ" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..261) /note="alternative" /note="splice variant 9Ai" /db_xref="GOA:Q708E5" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E5" /protein_id="CAF04481.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIAD HTRPHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEF AETLQFIDSM" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616799.2:439..801,AJ616800.1:1..143,AJ616801.1:1..115, AJ616802.1:1..126,AJ616803.1:1..111,AJ616804.1:1..108, AJ616805.1:1..117) /note="alternative" /note="splice variant 9Aii" /db_xref="GOA:P10242" /db_xref="HGNC:HGNC:7545" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/Swiss-Prot:P10242" /protein_id="CAF04482.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIAD HTRPHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEF AETLQFIDSDSSSWCDLSSFEFFEEADFSPSQHHTGKALQLQQREGNGTKPAGEPSPR VNKRMLSESSLDPPKVLPPARHSTIPLVILRKKRGQASPLATGDCSSFIFADVSSSTP KRSPVKSLPFSPSQFLNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQK ENTVFRTPAIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPSHLVEDLQDVIK QESDESGIVAEFQENGPPLLKKIKQEVESPTDKSGNFFCSHHWEGDSLNTQLFTQTSP VADAPNILTSSVLMAPASEDEDNVLKAFTVPKNRSLASPLQPCSSTWEPASCGKMEEQ MTSSSQARKYVNAFSARTLVM" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..147) /note="alternative" /note="splice variant 10A" /db_xref="GOA:Q708E3" /db_xref="HGNC:HGNC:7545" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E3" /protein_id="CAF04483.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIAD HTRPHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEF AETLQFIDSFLNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTV" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..369,AJ616804.1:1..108,AJ616805.1:1..117) /note="alternative" /note="splice variant 13A" /db_xref="GOA:Q708E2" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E2" /protein_id="CAF04484.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIAD HTRPHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEF AETLQFIDSFLNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTVF RTPAIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPSHLVEDLQDVIKQESDE SGIVAEFQENGPPLLKKIKQEVESPTDKSGNFFCSHHWEGDSLNTQLFTQTSPVADAP TGVQWHDFGSLQPLPPGFKRFSCLSLPRSWDYRHPPPRPANFEFLVETGFLHVGQAGL ELLTSGDLPASASQSARITGVSHRARPGNILTSSVLMAPASEDEDNVLKAFTVPKNRS LASPLQPCSSTWEPASCGKMEEQMTSSSQARKYVNAFSARTLVM" CDS join(95..117,AJ616792.1:1..118,AJ616793.1:1..72, AJ616794.1:1..93,AJ616795.1:1..221,AJ616796.4:1..235, AJ616797.1:1..79,AJ616798.1:1..107,AJ616799.2:1..255, AJ616800.1:1..143,AJ616801.1:1..115,AJ616802.1:1..126, AJ616803.1:1..111,AJ616804.1:1..141) /note="alternative" /note="splice variant 14A" /db_xref="GOA:Q708E1" /db_xref="HGNC:HGNC:7545" /db_xref="InterPro:IPR001005" /db_xref="InterPro:IPR009057" /db_xref="InterPro:IPR012642" /db_xref="InterPro:IPR015395" /db_xref="InterPro:IPR015495" /db_xref="InterPro:IPR017930" /db_xref="UniProtKB/TrEMBL:Q708E1" /protein_id="CAF04485.1" /translation="MARRPRHSIYSSDEDDEDFEMCDHDYDGLLPKSGKRHLGKTRWT REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHK RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVATSFQKNS HLMGFAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPA AAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQVLPTQNHTCSYPGWHSTTIAD HTRPHGDSAPVSCLGEHHSTPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEF AETLQFIDSFLNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQKENTVF RTPAIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPSHLVEDLQDVIKQESDE SGIVAEFQENGPPLLKKIKQEVESPTDKSGNFFCSHHWEGDSLNTQLFTQTSPVADAP NILTSSVLMAPASEDEDNVLKAFTVPKNRSLASPLQATKAQRLFQF" BASE COUNT 14 a 46 c 52 g 5 t ORIGIN 1 gccggggagg gacgcaggca ggcggcgggc agcgggaggc ggcagcccgg tgcggtcccc 61 gcggctctcg gcggagcccc gcgcccgccg cgccatggcc cgaagacccc ggcacag //