LOCUS AJ601395 3978 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA for ubiquitin-specific protease 42 (USP42 gene).
ACCESSION AJ601395
VERSION AJ601395.1
KEYWORDS ubiquitin-specific protease 42; USP42 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3978)
AUTHORS Quesada V.
JOURNAL Submitted (23-OCT-2003) to the INSDC. Quesada V., Bioquimica y
Biologia Molecular, Universidad de Oviedo, Edificio Santiago
Gascon, C/Fernando Bongera, Oviedo, Asturias, 33006, SPAIN.
REFERENCE 2
AUTHORS Quesada V., Perales A.D., Garabaya C., Lopez-Otin C.
TITLE The USP family of ubiquitin-specific proteases
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..3978
/db_xref="H-InvDB:HIT000330129"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 1..3978
/gene="USP42"
/product="ubiquitin-specific protease 42"
/db_xref="GOA:Q9H9J4"
/db_xref="H-InvDB:HIT000330129.9"
/db_xref="HGNC:HGNC:20068"
/db_xref="InterPro:IPR001394"
/db_xref="InterPro:IPR018200"
/db_xref="InterPro:IPR028889"
/db_xref="InterPro:IPR038765"
/db_xref="UniProtKB/Swiss-Prot:Q9H9J4"
/protein_id="CAE53097.1"
/translation="MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSL
NDVSNHTLSLGPVPGAVVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLK
WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQ
AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN
KLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQ
FVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKY
PEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVS
TSDIRSVLSQQAYVLFYIRSHDVKNGGELTHPTHSPGQSSPRPVISQRVVTNKQAAPG
FIGPQLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVN
RSSVIPEHPKKQKITISIHNKLPVRQCQSQPNLHSNSLENPTKPVPSSTITNSAVQST
SNASTMSVSSKVTKPIPRSESCSQPVMNGKSKLNSSVLVPYGAESSEDSDEESKGLGK
ENGIGTIVSSHSPGQDAEDEEATPHELQEPTTLNGANSADSDSDPKENGLAPDGASCQ
GQPALHSENPFAKANGLPGKLMPAPLLSLPEDKILETFRLSNKLKGSTDEMSAPGAER
GPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTKKAPPPRDPGTPATKEGAWEAMAVAP
EEPPPSAGEDIVGDTAPPDLCDPGSLTGDASPLSQDAKGMIAEGPRDSALAEAPEGLS
PAPPARSEEPCEQPLLVHPSGDHARDAQDPSQSLGAPEAAERPPAPVLDMAPAGHPEG
DAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVDRGHYRSRRERSSSGEPARESRSK
TEGHRHRRRRTCPRERDRQDRHAPEHHPGHGDRLSPGERRSLGRCSHHHSRHRSGVEL
DWVRHHYTEGERGWGREKFYPDRPRWDRCRYYHDRYALYAARDWKPFHGGREHERAGL
HERPHKDHNRGRRGCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCN
LSDRFHEHENGKSRKRRHDSVENSDSHVEKKARRSEQKDPLEEPKAKKHKKSKKKKKS
KDKHRDRDSRRHQQDSDLSAACSDADLHRHKKKKKKKKRHSRKSEDFVKDSELHLPRV
TSLETVAQFRRAQGGFPLSGGPPLEGVGPFREKTKHLRMESRDDRCRLFEYGQGKRRY
LELGR"
BASE COUNT 1032 a 1144 c 1048 g 754 t
ORIGIN
1 atgaccatag ttgacaaagc ttctgaatct tcagacccat cagcctatca gaatcagcct
61 ggcagctccg aggcagtctc acctggagac atggatgcag gttctgccag ctggggtgct
121 gtgtcttcat tgaatgatgt gtcaaatcac acactttctt taggaccagt acctggtgct
181 gtagtttatt cgagttcatc tgtacctgat aaatcaaaac catcaccaca aaaggatcaa
241 gccctaggtg atggcatcgc tcctccacag aaagttcttt tcccatctga gaagatttgt
301 cttaagtggc aacaaactca tagagttgga gctgggctcc agaatttggg caatacctgt
361 tttgccaatg cagcactgca gtgtttaacc tacacaccac ctcttgccaa ttacatgcta
421 tcacatgaac actccaaaac atgtcatgca gaaggctttt gtatgatgtg tacaatgcaa
481 gcacatatta cccaggcact cagtaatcct ggggacgtta ttaaaccaat gtttgtcatc
541 aatgagatgc ggcgtatagc taggcacttc cgttttggaa accaagaaga tgcccatgaa
601 ttccttcaat acactgttga tgctatgcag aaagcatgct tgaatggcag caataagtta
661 gacagacaca cccaggccac cactcttgtt tgtcagatat ttggaggata cctaagatct
721 agagtcaaat gtttaaattg caagggcgtt tcagatactt ttgatccata tcttgatata
781 acattggaga taaaggctgc tcagagtgtc aacaaggcat tggagcagtt tgtgaagccg
841 gaacagcttg atggagaaaa ctcgtacaag tgcagcaagt gtaaaaagat ggttccagct
901 tcaaagaggt tcactatcca tagatcctct aatgttctta cactttctct gaaacgtttt
961 gcaaatttta ccggtggaaa aattgctaag gatgtgaaat accctgagta tcttgatatt
1021 cggccatata tgtctcaacc caacggagag ccaattgtct acgtcttgta tgcagtgctg
1081 gtccacactg gttttaattg ccatgctggc cattacttct gctacataaa agctagcaat
1141 ggcctctggt atcaaatgaa tgactccatt gtatctacca gtgatattag atcggtactc
1201 agccaacaag cctatgtgct cttttatatc aggtcccatg atgtgaaaaa tggaggtgaa
1261 cttactcatc ccacccatag ccccggccag tcctctcccc gccccgtcat cagtcagcgg
1321 gttgtcacca acaaacaggc tgcgccaggc tttatcggac cacagcttcc ctctcacatg
1381 ataaagaatc cacctcactt aaatgggact ggaccattga aagacacgcc aagcagttcc
1441 atgtcgagtc ctaacgggaa ttccagtgtc aacagggcta gtcctgttaa tgcttcagct
1501 tctgtccaaa actggtcagt taataggtcc tcagtgatcc cagaacatcc taagaaacaa
1561 aaaattacaa tcagtattca caacaagttg cctgttcgcc agtgtcagtc tcaacctaac
1621 cttcatagta attctttgga gaaccctacc aagcccgttc cctcttctac cattaccaat
1681 tctgcagtac agtctacctc gaacgcatct acgatgtcag tttctagtaa agtaacaaaa
1741 ccgatccccc gcagtgaatc ctgctcccag cccgtgatga atggcaaatc caagctgaac
1801 tccagcgtgc tggtgcccta tggcgccgag tcctctgagg actctgacga ggagtcaaag
1861 gggctgggca aggagaatgg gattggtacg attgtgagct cccactctcc cggccaagat
1921 gccgaagatg aggaggccac tccgcacgag cttcaagaac ccacgaccct aaacggtgct
1981 aatagtgcag acagcgacag tgacccgaaa gaaaacggcc tagcgcctga tggtgccagc
2041 tgccaaggcc agcctgccct gcactcagaa aatccctttg ctaaggcaaa cggtcttcct
2101 ggaaagttga tgcctgctcc tttgctgtct ctcccagaag acaaaatctt agagaccttc
2161 aggcttagca acaaactgaa aggctcgacg gatgaaatga gtgcacctgg agcagagagg
2221 ggccctcccg aggaccgcga cgccgagcct cagcctggca gccccgccgc cgaatccctg
2281 gaggagccag atgcggccgc cggcctcagc agcaccaaga aggctccgcc gccccgcgat
2341 cccggcaccc ccgctaccaa agaaggcgcc tgggaggcca tggccgtcgc ccccgaggag
2401 cctccgccca gcgccggcga ggacatcgtg ggggacacag caccccctga cctgtgtgat
2461 cccgggagct taacaggcga tgcgagcccg ttgtcccagg acgcaaaggg gatgatcgcg
2521 gagggcccgc gggactcggc gttggcggaa gccccggaag ggttgagtcc ggctccgcct
2581 gcgcggtcgg aggagccctg cgagcagcca ctccttgttc accccagcgg ggaccacgcc
2641 cgggacgctc aggacccatc ccagagcttg ggcgcacccg aggccgcaga gcggccgcca
2701 gctcctgtgc tggacatggc cccggccggt cacccggaag gggacgctga gcctagcccc
2761 ggcgagaggg tcgaggacgc cgcggcgccg aaagccccag gcccttcccc agcgaaggag
2821 aaaatcggca gcctcagaaa ggtggaccga ggccactacc gcagccggag agagcgctcg
2881 tccagcgggg agcccgccag agagagcagg agcaagactg agggccaccg tcaccggcgg
2941 cgccgcacct gcccccggga gcgcgaccgc caggaccgcc acgccccgga gcaccacccc
3001 ggccacggcg acaggctcag ccctggcgag cgccgctctc tgggcaggtg cagtcaccac
3061 cactcccgac accggagcgg ggtggagctg gactgggtca gacaccacta caccgagggc
3121 gagcgtggct ggggccggga gaagttctac cccgacaggc cgcgctggga caggtgccgg
3181 tactaccatg acaggtacgc cctgtacgct gcccgggact ggaagccctt ccacggcggc
3241 cgcgagcacg agcgggccgg gctgcacgag cggccgcaca aggaccacaa ccggggccgt
3301 aggggctgcg agccggcccg ggagagggag cggcaccgcc ccagcagccc ccgcgcaggc
3361 gcgccccacg ccctcgcccc gcaccccgac cgcttctccc acgacagaac tgcacttgta
3421 gccggagaca actgtaacct ctctgatcgg tttcacgaac acgaaaatgg aaagtcccgg
3481 aaacggagac acgacagtgt ggagaacagt gacagtcatg ttgaaaagaa agcccggagg
3541 agcgaacaga aggatcctct agaagagcct aaagcaaaga agcacaaaaa atcaaagaag
3601 aaaaagaaat ccaaagacaa acaccgagac cgcgactcca ggaggcatca gcaggactca
3661 gacctctcag cagcgtgctc tgacgctgac ctccacagac acaaaaaaaa gaagaagaaa
3721 aagaagagac attcaagaaa atcagaggac tttgttaaag attcagaact gcacttaccc
3781 agggtcacca gcttggagac tgtcgcccag ttccggagag cccagggtgg ctttcctctc
3841 tctggtggcc cgcctctgga aggcgtcgga cctttccgtg agaaaacgaa acacttacgg
3901 atggaaagca gggatgacag gtgtcgtctc tttgagtatg gccagggtaa gaggagatac
3961 ttggaattag gaagatag
//