LOCUS       AJ584709                1754 bp    mRNA    linear   HUM 15-APR-2005
DEFINITION  Homo sapiens partial mRNA for neuronal nicotinic acetylcholine
            receptor, alpha3 subunit, splice variant 2, (CHRNA3 gene).
ACCESSION   AJ584709
VERSION     AJ584709.1
KEYWORDS    alpha3 subunit; alternative splicing; CHRNA3 gene; neuronal
            nicotinic acetylcholine receptor.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Solda G.
  JOURNAL   Submitted (26-SEP-2003) to the INSDC. Solda G., Biology and
            Genetics for Medical Science, University of Milan, v. Viotti 3/5,
            20133 Milan, ITALY.
REFERENCE   2
  AUTHORS   Solda G., Boi S., Duga S., Fornasari D., Benfante R., Malcovati M.,
            Tenchini M.L.
  TITLE     In vivo RNA-RNA duplexes from CHRNA3 and CHRNA5 overlapping
            transcripts.
  JOURNAL   Unpublished.
REFERENCE   3
  AUTHORS   Solda G., Boi S., Duga S., Fornasari D., Benfante R., Malcovati M.,
            Tenchini M.L.
  TITLE     In vivo RNA-RNA duplexes from human alpha3 and alpha5 nicotinic
            receptor subunit mRNAs
  JOURNAL   Gene 345(2), 155-164(2005).
   PUBMED   15716100
FEATURES             Location/Qualifiers
     source          1..1754
                     /db_xref="H-InvDB:HIT000249164"
                     /organism="Homo sapiens"
                     /chromosome="15"
                     /map="15q24"
                     /mol_type="mRNA"
                     /cell_line="SY5Y human neuroblastoma"
                     /db_xref="taxon:9606"
     mRNA            <1..1732
                     /gene="CHRNA5"
                     /note="alternative"
                     /note="splice variant 1, long 3'UTR"
     CDS             <1..129
                     /codon_start=1
                     /gene="CHRNA3"
                     /product="neuronal nicotinic acetylcholine receptor,
                     alpha3 subunit"
                     /note="alternative"
                     /note="splice variant 1, long 3'UTR"
                     /db_xref="GOA:Q6EWN2"
                     /db_xref="H-InvDB:HIT000249164.13"
                     /db_xref="InterPro:IPR006029"
                     /db_xref="InterPro:IPR006201"
                     /db_xref="InterPro:IPR036719"
                     /db_xref="UniProtKB/TrEMBL:Q6EWN2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /protein_id="CAE48371.1"
                     /translation="IQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQPLMAREDA"
     3'UTR           130..1732
                     /gene="CHRNA3"
                     /note="splice variant 1, long 3'UTR"
     repeat_region   complement(701..1046)
                     /rpt_family="LTR/MaLR"
     repeat_region   complement(1060..1284)
                     /rpt_family="MER20"
     regulatory      1705..1710
                     /gene="CHRNA3"
                     /regulatory_class="polyA_signal_sequence"
     polyA_site      1732
                     /gene="CHRNA3"
BASE COUNT          528 a          338 c          354 g          534 t
ORIGIN      
        1 attcaagatg attggaagta tgttgccatg gtgattgatc gtatttttct gtgggttttc
       61 accctggtgt gcattctagg gacagcagga ttgtttctgc aacccctgat ggccagggaa
      121 gatgcataag cactaagctg tgtgcctgcc tgggagactt ccttgtgtca gggcaggagg
      181 aggctgcttc ctagtaagaa cgtactttct gttatcaagc taccagcttt gtttttggca
      241 tttcgaggtt tacttatttt ccacttatct tggaatcatg caaaaaaaaa atgtcaagag
      301 tatttattac cgataaatga acatttaact agcctttttg gtatggtaaa gagatgtcaa
      361 aatgtgattc tatgtgatta gtatgctatg ctatggaata tacatgtaaa aatgtttcct
      421 tttagttgtt gaaacaaaac tggatagaaa aatgctgttc agaaatatga aaagtcattc
      481 agttatcact acagatctcc cagtaatttt tcttatttag cccataatct ctttgaaggt
      541 ttatactaat tcagcaatcc cccatcgtta cccatttctt accatgcatt tctcgttctt
      601 tactgggtct aaagggctat gcctccattt cagagagctt caactacttc tcttgcatac
      661 ttctaaatta tactatgaga aatcatgcct agttattcat tgttaatata actgtcttag
      721 tacaccataa actgggtgga ttataaacaa cagaaacttc tcagttttgg aggttgggag
      781 gtccaaggtc aaggcaccag caaatttggt gtctggtgag ggtcctcttc ctcaaagggg
      841 gggtgccttc tagctgtgtc ctcacatgac tgaagggact agctatctct gtggggtcta
      901 ttttataagg gcactaaccc cattcatgag agcagagccc ccatggccta atcacctttc
      961 caaggcccca ccttctatct aagacaatca cgctgggaat aggtttcaac atatgaattg
     1021 ggggaggaca catttggacc acagcatgaa cctttagaac agggtttctc agccttagca
     1081 ctacggacat tttgggctgg ataaatatgt gttggtacag aatgggggta tcctgtgcat
     1141 tgtaggatct ttagcagtac cctagcctca actcactaga tgccaatgac ataccttgct
     1201 tcttcaccag ttatgataac caagaatgtc tccattgtta aatgtcccct taggagcaaa
     1261 attgcccctg gttgagaaac attgctttag acaaattgtt aagagtatca tgtactacac
     1321 ttctgaaact taacgtgatc atcaccactg acagatgatt cacagagaga gactgtttga
     1381 atcttgtctc actagttttt cctgtgcaaa aataaaatgg acagaattgc agcccgctgt
     1441 gactcatgtt tcaataagtc aaaagaaaga tgtcgataaa aatttatata taaaaatcat
     1501 aagtaacagt aatggtagta taagagggat cagggatgta tacgaactaa ggtaggtagc
     1561 tggcaggcaa tctaaattca tcacaccagg ctttcactca ttaaatggca ttaaacacct
     1621 gcctacgatt aaatgcaaat tagatagggt ctcctccgcc ttccaaagag cattggcttg
     1681 aacttagata ggttacttat tataaataaa tgaggtgttt gtgatctcaa caaaaaaaaa
     1741 aaaaaaaaaa aaaa
//