LOCUS AJ584708 347 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens partial mRNA for neuronal nicotinic acetylcholine receptor, alpha3 subunit, splice variant 1b, (CHRNA3 gene). ACCESSION AJ584708 VERSION AJ584708.1 KEYWORDS alpha3 subunit; alternative splicing; CHRNA3 gene; neuronal nicotinic acetylcholine receptor. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 347) AUTHORS Solda G. JOURNAL Submitted (26-SEP-2003) to the INSDC. Solda G., Biology and Genetics for Medical Science, University of Milan, v. Viotti 3/5, 20133 Milan, ITALY. REFERENCE 2 AUTHORS Solda G., Boi S., Duga S., Fornasari D., Benfante R., Malcovati M., Tenchini M.L. TITLE In vivo RNA-RNA duplexes from CHRNA3 and CHRNA5 overlapping transcripts. JOURNAL Unpublished. REFERENCE 3 AUTHORS Solda G., Boi S., Duga S., Fornasari D., Benfante R., Malcovati M., Tenchini M.L. TITLE In vivo RNA-RNA duplexes from human alpha3 and alpha5 nicotinic receptor subunit mRNAs JOURNAL Gene 345(2), 155-164(2005). PUBMED 15716100 FEATURES Location/Qualifiers source 1..347 /db_xref="H-InvDB:HIT000249163" /organism="Homo sapiens" /chromosome="15" /map="15q24" /mol_type="mRNA" /cell_line="SY5Y human neuroblastoma" /db_xref="taxon:9606" mRNA <1..331 /gene="CHRNA5" /note="alternative" /note="splice variant 1b, lacks exon 7, short 3'UTR" CDS <1..129 /codon_start=1 /gene="CHRNA3" /product="neuronal nicotinic acetylcholine receptor, alpha3 subunit" /note="alternative" /note="splice variant 1b, lacks exon 7, short 3'UTR" /note="includes exon 7" /db_xref="GOA:Q6EWN2" /db_xref="H-InvDB:HIT000249163.11" /db_xref="InterPro:IPR006029" /db_xref="InterPro:IPR006201" /db_xref="InterPro:IPR036719" /db_xref="UniProtKB/TrEMBL:Q6EWN2" /experiment="experimental evidence, no additional details recorded" /protein_id="CAE48370.1" /translation="IQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQPLMAREDA" 3'UTR 130..331 /gene="CHRNA3" /note="splice variant 1b, lacks exon 7, short 3'UTR" repeat_region complement(195..292) /rpt_family="Alu-Sp" /experiment="experimental evidence, no additional details recorded" regulatory 307..312 /gene="CHRNA3" /regulatory_class="polyA_signal_sequence" polyA_site 331 /gene="CHRNA3" BASE COUNT 121 a 64 c 78 g 84 t ORIGIN 1 attcaagatg attggaagta tgttgccatg gtgattgatc gtatttttct gtgggttttc 61 accctggtgt gcattctagg gacagcagga ttgtttctgc aacccctgat ggccagggaa 121 gatgcataag cactaagctg tgtgcctgcc tgggagactt ccttgtgtca gggcaggagg 181 aggctgcttc ctagaacaaa aagcccaaga gatccaacaa ttgaaacgaa aagaaaagtc 241 cacagaaaca tccgatcaag aacctgggct atgaatttcc aatcttcaac aacctgttag 301 gaaaaaaata aaaatgcatt aaataattgt aaaaaaaaaa aaaaaaa //