LOCUS AJ564932 1385 bp mRNA linear HUM 22-JAN-2004
DEFINITION Homo sapiens mRNA for protocadherin (PCDHX gene), exon 4.1.
ACCESSION AJ564932
VERSION AJ564932.1
KEYWORDS PCDHX gene; protocadherin.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1385)
AUTHORS Blanco-Arias P.
JOURNAL Submitted (03-JUN-2003) to the INSDC. Blanco-Arias P., Pathology,
University of Cambridge, Tennis Court Rd, CB2 1QP, UNITED KINGDOM.
REFERENCE 2
AUTHORS Blanco-Arias P., Sargent C.A., Affara N.A.
TITLE Protocadherin X ( PCDHX) and Y ( PCDHY) genes; multiple mRNA
isoforms encoding variant signal peptides and cytoplasmic domains
JOURNAL Mamm. Genome 15(1), 41-52(2004).
PUBMED 14727141
FEATURES Location/Qualifiers
source 1..1385
/db_xref="H-InvDB:HIT000248812"
/organism="Homo sapiens"
/map="Xq21.3"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS <846..>1385
/codon_start=1
/gene="PCDHX"
/product="protocadherin"
/note="exon 4.1"
/db_xref="GOA:Q9BZA7"
/db_xref="H-InvDB:HIT000248812.12"
/db_xref="HGNC:HGNC:8656"
/db_xref="InterPro:IPR002126"
/db_xref="InterPro:IPR013164"
/db_xref="InterPro:IPR013585"
/db_xref="InterPro:IPR015919"
/db_xref="InterPro:IPR020894"
/db_xref="UniProtKB/Swiss-Prot:Q9BZA7"
/protein_id="CAD92411.1"
/translation="MDLLSGTYIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLL
KDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPR
DEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTL
PAAVDPDVGINGVQNYELIK"
BASE COUNT 401 a 265 c 224 g 495 t
ORIGIN
1 ctggtggtcc agtacctcca aagatatgga atacactcct gaaatatcct gaaaactttt
61 ttttttcaga atcctttaat aagcagttat gtcaatctga aagttgctta cttgtacttt
121 atattaatag ctattcttgt ttttcttatc caaagaaaaa tcctctaatc cccttttcac
181 atgatagttg ttaccatgtt taggcattag tcacatcaac ccctctcctc tcccaaactt
241 ctcttcttca aatcaaactt tattagtccc tcctttataa tgattccttg cctcgtttta
301 tccagatcaa ttttttttca ctttgatgcc cagagctgaa gaaatggact actgtataaa
361 ttattcattg ccaagagaat aattgcattt taaacccata ttataacaaa gaataatgat
421 tatattttgt gatttgtaac aaataccctt tattttccct taactattga attaaatatt
481 ttaattattt gtattctctt taactatctt ggtatattaa agtattatct tttatatatt
541 tatcaatggt ggacactttt ataggtactc tgtgtcattt ttgatactgt aggtatctta
601 tttcatttat ctttattctt aatgtacgaa ttcataatat ttgattcaga acaaatttat
661 cactaattaa cagagtgtca attatgctaa catctcattt actgatttta atttaaaaca
721 gtttttgtta acatgcatgt ttagggttgg cttcttaata atttcttctt cctcttctct
781 ctctcctctt cttttggtca gtgttgtgcg ggttaataca acaaactgta acaagtgtac
841 ctggtatgga cttgttgtcc gggacgtaca ttttcgcggt cctgctagca tgcgtggtgt
901 tccactctgg cgcccaggag aaaaactaca ccatccgaga agaaatgcca gaaaacgtcc
961 tgataggcga cttgttgaaa gaccttaact tgtcgctgat tccaaacaag tccttgacaa
1021 ctgctatgca gttcaagcta gtgtacaaga ccggagatgt gccactgatt cgaattgaag
1081 aggatactgg tgagatcttc actactggcg ctcgcattga tcgtgagaaa ttatgtgctg
1141 gtatcccaag ggatgagcat tgcttttatg aagtggaggt tgccattttg ccggatgaaa
1201 tatttagact ggttaagata cgttttctga tagaagatat aaatgataat gcaccattgt
1261 tcccagcaac agttatcaac atatcaattc cagagaactc ggctataaac tctaaatata
1321 ctctcccagc ggctgttgat cctgacgtag gaataaacgg agttcaaaac tacgaactaa
1381 ttaag
//