LOCUS AJ551176 3148 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for Syndecan-1 (SDC-1 gene).
ACCESSION AJ551176
VERSION AJ551176.1
KEYWORDS SDC-1 gene; Syndecan-1.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3148)
AUTHORS Mennerich D.
JOURNAL Submitted (24-MAR-2003) to the INSDC. Mennerich D., Lung Cancer
Discovery, metaGen Pharmaceuticals GmbH, Oudenarder Str. 16, 13347
Berlin, GERMANY.
REFERENCE 2
AUTHORS Mennerich D., Dahl E., Lichtner R., Klaman I., Vogel A.,
Rosenthal A., Sommer A., Thierauch K.H.
TITLE Shift of Syndecan-1 expression from epithelial to stromal cells
during progression of solid tumors
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..3148
/db_xref="H-InvDB:HIT000248611"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 249..1181
/gene="SDC-1"
/product="Syndecan-1"
/db_xref="GOA:P18827"
/db_xref="H-InvDB:HIT000248611.14"
/db_xref="HGNC:HGNC:10658"
/db_xref="InterPro:IPR001050"
/db_xref="InterPro:IPR003585"
/db_xref="InterPro:IPR027789"
/db_xref="InterPro:IPR030479"
/db_xref="InterPro:IPR031190"
/db_xref="PDB:4GVC"
/db_xref="PDB:4GVD"
/db_xref="PDB:6EJE"
/db_xref="UniProtKB/Swiss-Prot:P18827"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAD80245.1"
/translation="MRRAALWLWLCALALSLQPALPQIVATNLPPEDQDGSGDDSDNF
SGSGAGALQDITLSQQTPSTWKDTQLLTAIPTSPEPTGLEATAASTSTLPAGEGPKEG
EAVVLPEVEPGLTAREQEATPRPRETTQLPTTHQASTTTATTAQEPATSHPHRDMQPG
HHETSTPAGPSQADLHTPHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGE
NTAVVAVEPDRRNQSPVDQGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLY
RMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA"
BASE COUNT 601 a 930 c 936 g 681 t
ORIGIN
1 gtgggaaggg cctgtgggtt tattataagg cggagctcgg cgggagaggt gcgggccgaa
61 tccgagccga gcggagagga atccggcagt agagagcgga ctccagccgg cggaccctgc
121 agccctcgcc tgggacagcg gcgcgctggg caggcgccca agagagcatc gagcagcgga
181 acccgcgaag ccggcccgca gccgcgaccc gcgcagcctg ccgctctccc gccgccggtc
241 cgggcagcat gaggcgcgcg gcgctctggc tctggctgtg cgcgctggcg ctgagcctgc
301 agccggccct gccgcaaatt gtggctacta atttgccccc tgaagatcaa gatggctctg
361 gggatgactc tgacaacttc tccggctcag gtgcaggtgc tttgcaagat atcaccttgt
421 cacagcagac cccctccact tggaaggaca cgcagctcct gacggctatt cccacgtctc
481 cagaacccac cggcctggag gctacagctg cctccacctc caccctgccg gctggagagg
541 ggcccaagga gggagaggct gtagtcctgc cagaagtgga gcctggcctc accgcccggg
601 agcaggaggc caccccccga cccagggaga ccacacagct cccgaccact catcaggcct
661 caacgaccac agccaccacg gcccaggagc ccgccacctc ccacccccac agggacatgc
721 agcctggcca ccatgagacc tcaacccctg caggacccag ccaagctgac cttcacactc
781 cccacacaga ggatggaggt ccttctgcca ccgagagggc tgctgaggat ggagcctcca
841 gtcagctccc agcagcagag ggctctgggg agcaggactt cacctttgaa acctcggggg
901 agaatacggc tgtagtggcc gtggagcctg accgccggaa ccagtcccca gtggatcagg
961 gggccacggg ggcctcacag ggcctcctgg acaggaaaga ggtgctggga ggggtcattg
1021 ccggaggcct cgtggggctc atctttgctg tgtgcctggt gggtttcatg ctgtaccgca
1081 tgaagaagaa ggacgaaggc agctactcct tggaggagcc gaaacaagcc aacggcgggg
1141 cctaccagaa gcccaccaaa caggaggaat tctatgcctg acgcgggagc catgcgcccc
1201 ctccgccctg ccactcacta ggcccccact tgcctcttcc ttgaagaact gcaggccctg
1261 gcctcccctg ccaccaggcc acctccccag cattccagcc cctctggtcg ctcctgccca
1321 cggagtcgtg gggtgtgctg ggagctccac tctgcttctc tgacttctgc ctggagactt
1381 agggcaccag gggtttctcg cataggacct ttccaccaca gccagcacct ggcatcgcac
1441 cattctgact cggtttctcc aaactgaagc agcctctccc caggtccagc tctggagggg
1501 agggggatcc gactgctttg gacctaaatg gcctcatgtg gctggaagat cctgcgggtg
1561 gggcttgggg ctcacacacc tgtagcactt actggtagga ccaagcatct tgggggggtg
1621 gccgctgagt ggcaggggac aggagtccac tttgtttcgt ggggaggtct aatctagata
1681 tcgacttgtt tttgcacatg tttcctctag ttctttgttc atagcccagt agaccttgtt
1741 acttctgagg taagttaagt aagttgattc ggtatccccc catcttgctt ccctaatcta
1801 tggtcgggag acagcatcag ggttaagaag actttttttt ttttttttaa actaggagaa
1861 ccaaatctgg aagccaaaat gtaggcttag tttgtgtgtt gtctcttgag tttgtcgctc
1921 atgtgtgcaa cagggtatgg actatctgtc tggtggcccc gtttctggtg gtctgttggc
1981 aggctggcca gtccaggctg ccgtggggcc gccgcctctt tcaagcagtc gtgcctgtgt
2041 ccatgcgctc agggccatgc tgaggcctgg gccgctgcca cgttggagaa gcccgtgtga
2101 gaagtgaatg ctgggactca gccttcagac agagaggact gtagggaggg cggcaggggc
2161 ctggagatcc tcctgcagac cacgcccgtc ctgcctgtgg cgccgtctcc aggggctgct
2221 tcctcctgga aattgacgag gggtgtcttg ggcagagctg gctctgagcg cctccatcca
2281 aggccaggtt ctccgttagc tcctgtggcc ccaccctggg ccctgggctg gaatcaggaa
2341 tattttccaa agagtgatag tcttttgctt ttggcaaaac tctacttaat ccaatgggtt
2401 tttccctgta cagtagattt tccaaatgta ataaacttta atataaagta gtcctgtgaa
2461 tgccactgcc ttcgcttctt gcctctgtgc tgtgtgtgac gtgaccggac ttttctgcaa
2521 acaccaacat gttgggaaac ttggctcgaa tctctgtgcc ttcgtctttc ccatggggag
2581 ggattctggt tccagggtcc ctctgtgtat ttgctttttt gttttggctg aaattctcct
2641 ggaggtcggt aggttcagcc aaggttttat aaggctgatg tcaatttctg tgttgccaag
2701 ctccaagccc catcttctaa atggcaaagg aaggtggatg gccccagcac agcttgacct
2761 gaggctgtgg tcacagcgga ggtgtggagc cgaggcctac cccgcagaca ccttggacat
2821 cctcctccca cccggctgca gaggccagag gcccccagcc cagggctcct gcacttactt
2881 gcttatttga caacgtttca gcgactccgt tggccactcc gagaggtggg ccagtctgtg
2941 gatcagagat gcaccaccaa gccaagggaa cctgtgtccg gtattcgata ctgcgacttt
3001 ctgcctggag tgtatgactg cacatgactc gggggtgggg aaaggggtcg gctgaccatg
3061 ctcatctgct ggtccgtggg acggtgccca agccagaggc tgggttcatt tgtgtaacga
3121 caataaacgg tacttgtcat ttcgggca
//