LOCUS AJ517294 1537 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens mRNA for polymyositis/scleroderma autoantigen 1 (PMSCL1 gene), splice variant 2. ACCESSION AJ517294 VERSION AJ517294.1 KEYWORDS alternative splicing; PM/Scl-75; PMSCL1 gene; polymyositis/scleroderma autoantigen 1. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1537) AUTHORS Raijmakers R. JOURNAL Submitted (15-NOV-2002) to the INSDC. Raijmakers R., Biochemisty 161, University of Nijmegen, PO Box 9101, Gld, NL-6500 HB, NETHERLANDS. REFERENCE 2 AUTHORS Raijmakers R., Vree Egberts W., van Venrooij W.J., Pruijn G.J.M. TITLE The association of the human PM/Scl-75 autoantigen with the exosome is dependent on a newly identified N terminus JOURNAL J Biol Chem 278(33), 30698-30704(2003). PUBMED 12788944 COMMENT related entries BC012371.1, M58460.19 and AJ505989.1 FEATURES Location/Qualifiers source 1..1537 /db_xref="H-InvDB:HIT000248394" /organism="Homo sapiens" /chromosome="4" /map="4q28.1" /mol_type="mRNA" /db_xref="taxon:9606" CDS 106..1476 /gene="PMSCL1" /product="polymyositis/scleroderma autoantigen 1" /note="PM/Scl-75" /db_xref="GOA:Q06265" /db_xref="H-InvDB:HIT000248394.13" /db_xref="HGNC:HGNC:9137" /db_xref="InterPro:IPR001247" /db_xref="InterPro:IPR015847" /db_xref="InterPro:IPR020568" /db_xref="InterPro:IPR027408" /db_xref="InterPro:IPR033100" /db_xref="InterPro:IPR036345" /db_xref="PDB:2NN6" /db_xref="PDB:6D6Q" /db_xref="PDB:6D6R" /db_xref="PDB:6H25" /db_xref="UniProtKB/Swiss-Prot:Q06265" /protein_id="CAD56889.1" /translation="MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYG CCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKL NRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHF RRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMD GLLVIAMNKHREICTIQSSGGIMLLKDQVLRCSKIAGVKVAEITELILKALENDQKVR KEGGKFGFAESIANQRITAFKMEKAPIDTSDVEEKAEEIIAEAEPPSEVVSTPVLWTP GTAQIGEGVENSWGDLEDSEKEDDEGGGDQAIILDGIKMDTGVEVSDIGSQELGFHHV GQTGLEFLTSDAPIILSDSEEEEMIILEPDKNPKKIRTQTTSAKQEKAPSKKPVKRRK KKRAAN" BASE COUNT 492 a 293 c 371 g 381 t ORIGIN 1 gacgtaattt tcctgcgcct cggggcgagc agcggcgcgc aaggaaagat cgggttccgt 61 ttttcccgcg gattctggtg cctgtggggc cggtgaccca acaccatgaa ggaaacgcca 121 ctctcaaact gcgaacgccg cttcctactc cgtgccatcg aagagaagaa gcggctggat 181 ggcagacaaa cctatgatta taggaacatc aggatctcat ttggaacaga ttacggatgc 241 tgcattgtgg aacttggaaa aacaagagtt cttggacagg tttcctgtga acttgtgtct 301 ccaaaactca atcgggcaac agaaggtatt ctttttttta accttgaact ctctcagatg 361 gccgctccag ctttcgaacc tggcaggcag tcagatctct tggtgaagtt gaatcgactc 421 atggaaagat gtctaagaaa ttcgaagtgt atagacactg agtctctctg tgttgttgct 481 ggtgaaaagg tttggcaaat acgtgtagac ctacatttat taaatcatga tggaaatatt 541 attgatgctg ccagcattgc tgcaatcgtg gccttatgtc atttccgaag acctgatgtc 601 tctgtccaag gagatgaagt aacactgtat acacctgaag agcgtgatcc tgtaccatta 661 agtatccacc acatgcccat ttgtgtcagt tttgcctttt tccagcaagg aacatattta 721 ttggtggatc ccaatgaacg agaagaacgt gtgatggatg gcttgctggt gattgccatg 781 aacaaacatc gagagatttg tactatccag tccagtggtg ggataatgct actaaaagat 841 caagttctga gatgcagtaa aatcgctggt gtgaaagtag cagaaattac agagctaata 901 ttgaaagctt tggagaatga ccaaaaagta aggaaagaag gtggaaagtt tggttttgca 961 gagtctatag caaatcaaag gatcacagca tttaaaatgg aaaaggcccc tattgatacc 1021 tcggatgtag aagaaaaagc agaagaaatc attgctgaag cagaacctcc ttcagaagtt 1081 gtttctacac ctgtgctatg gactcctgga actgcccaaa ttggagaggg agtagaaaac 1141 tcctggggtg atcttgaaga ctctgagaag gaagatgatg aaggcggtgg tgatcaagct 1201 atcattcttg atggtataaa aatggacact ggagtagaag tctctgatat tggaagccaa 1261 gagctggggt ttcaccatgt tggccagact ggactcgagt tcctgacctc agatgctccc 1321 ataatactct cagatagtga agaagaagaa atgatcattt tggaaccaga caagaatcca 1381 aagaaaataa gaacacagac caccagtgca aaacaagaaa aagcaccaag taaaaagcca 1441 gtgaaaagaa gaaaaaagaa gagagctgcc aattaaagct aacagttgta tatctgtata 1501 tatacctatt aaaagggata tttattccaa aaaaaaa //