LOCUS       AJ517294                1537 bp    mRNA    linear   HUM 07-OCT-2008
DEFINITION  Homo sapiens mRNA for polymyositis/scleroderma autoantigen 1
            (PMSCL1 gene), splice variant 2.
ACCESSION   AJ517294
VERSION     AJ517294.1
KEYWORDS    alternative splicing; PM/Scl-75; PMSCL1 gene;
            polymyositis/scleroderma autoantigen 1.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Raijmakers R.
  JOURNAL   Submitted (15-NOV-2002) to the INSDC. Raijmakers R., Biochemisty
            161, University of Nijmegen, PO Box 9101, Gld, NL-6500 HB,
            NETHERLANDS.
REFERENCE   2
  AUTHORS   Raijmakers R., Vree Egberts W., van Venrooij W.J., Pruijn G.J.M.
  TITLE     The association of the human PM/Scl-75 autoantigen with the exosome
            is dependent on a newly identified N terminus
  JOURNAL   J Biol Chem 278(33), 30698-30704(2003).
   PUBMED   12788944
COMMENT     related entries BC012371.1, M58460.19 and AJ505989.1
FEATURES             Location/Qualifiers
     source          1..1537
                     /db_xref="H-InvDB:HIT000248394"
                     /organism="Homo sapiens"
                     /chromosome="4"
                     /map="4q28.1"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             106..1476
                     /gene="PMSCL1"
                     /product="polymyositis/scleroderma autoantigen 1"
                     /note="PM/Scl-75"
                     /db_xref="GOA:Q06265"
                     /db_xref="H-InvDB:HIT000248394.13"
                     /db_xref="HGNC:HGNC:9137"
                     /db_xref="InterPro:IPR001247"
                     /db_xref="InterPro:IPR015847"
                     /db_xref="InterPro:IPR020568"
                     /db_xref="InterPro:IPR027408"
                     /db_xref="InterPro:IPR033100"
                     /db_xref="InterPro:IPR036345"
                     /db_xref="PDB:2NN6"
                     /db_xref="PDB:6D6Q"
                     /db_xref="PDB:6D6R"
                     /db_xref="PDB:6H25"
                     /db_xref="UniProtKB/Swiss-Prot:Q06265"
                     /protein_id="CAD56889.1"
                     /translation="MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYG
                     CCIVELGKTRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKL
                     NRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHF
                     RRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMD
                     GLLVIAMNKHREICTIQSSGGIMLLKDQVLRCSKIAGVKVAEITELILKALENDQKVR
                     KEGGKFGFAESIANQRITAFKMEKAPIDTSDVEEKAEEIIAEAEPPSEVVSTPVLWTP
                     GTAQIGEGVENSWGDLEDSEKEDDEGGGDQAIILDGIKMDTGVEVSDIGSQELGFHHV
                     GQTGLEFLTSDAPIILSDSEEEEMIILEPDKNPKKIRTQTTSAKQEKAPSKKPVKRRK
                     KKRAAN"
BASE COUNT          492 a          293 c          371 g          381 t
ORIGIN      
        1 gacgtaattt tcctgcgcct cggggcgagc agcggcgcgc aaggaaagat cgggttccgt
       61 ttttcccgcg gattctggtg cctgtggggc cggtgaccca acaccatgaa ggaaacgcca
      121 ctctcaaact gcgaacgccg cttcctactc cgtgccatcg aagagaagaa gcggctggat
      181 ggcagacaaa cctatgatta taggaacatc aggatctcat ttggaacaga ttacggatgc
      241 tgcattgtgg aacttggaaa aacaagagtt cttggacagg tttcctgtga acttgtgtct
      301 ccaaaactca atcgggcaac agaaggtatt ctttttttta accttgaact ctctcagatg
      361 gccgctccag ctttcgaacc tggcaggcag tcagatctct tggtgaagtt gaatcgactc
      421 atggaaagat gtctaagaaa ttcgaagtgt atagacactg agtctctctg tgttgttgct
      481 ggtgaaaagg tttggcaaat acgtgtagac ctacatttat taaatcatga tggaaatatt
      541 attgatgctg ccagcattgc tgcaatcgtg gccttatgtc atttccgaag acctgatgtc
      601 tctgtccaag gagatgaagt aacactgtat acacctgaag agcgtgatcc tgtaccatta
      661 agtatccacc acatgcccat ttgtgtcagt tttgcctttt tccagcaagg aacatattta
      721 ttggtggatc ccaatgaacg agaagaacgt gtgatggatg gcttgctggt gattgccatg
      781 aacaaacatc gagagatttg tactatccag tccagtggtg ggataatgct actaaaagat
      841 caagttctga gatgcagtaa aatcgctggt gtgaaagtag cagaaattac agagctaata
      901 ttgaaagctt tggagaatga ccaaaaagta aggaaagaag gtggaaagtt tggttttgca
      961 gagtctatag caaatcaaag gatcacagca tttaaaatgg aaaaggcccc tattgatacc
     1021 tcggatgtag aagaaaaagc agaagaaatc attgctgaag cagaacctcc ttcagaagtt
     1081 gtttctacac ctgtgctatg gactcctgga actgcccaaa ttggagaggg agtagaaaac
     1141 tcctggggtg atcttgaaga ctctgagaag gaagatgatg aaggcggtgg tgatcaagct
     1201 atcattcttg atggtataaa aatggacact ggagtagaag tctctgatat tggaagccaa
     1261 gagctggggt ttcaccatgt tggccagact ggactcgagt tcctgacctc agatgctccc
     1321 ataatactct cagatagtga agaagaagaa atgatcattt tggaaccaga caagaatcca
     1381 aagaaaataa gaacacagac caccagtgca aaacaagaaa aagcaccaag taaaaagcca
     1441 gtgaaaagaa gaaaaaagaa gagagctgcc aattaaagct aacagttgta tatctgtata
     1501 tatacctatt aaaagggata tttattccaa aaaaaaa
//