LOCUS AJ505025 6145 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for long transient receptor potential channel 3
(TRPM3 gene), splice variant longer variant.
ACCESSION AJ505025
VERSION AJ505025.1
KEYWORDS TRP-homologous cation channel; TRPM3 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6145)
AUTHORS Harteneck C.
JOURNAL Submitted (06-AUG-2002) to the INSDC. Harteneck C., Institut fuer
Pharmakologie, Freie Universitaet Berlin Fachbereich Humanmedizin,
Thielallee 69-73, D-14195 Berlin, GERMANY.
REFERENCE 2
AUTHORS Harteneck C., Grimm C., Kraft R., Schultz G.
TITLE Cloning and functional characterization of TRPM3, a novel
osmo-sensitive cation channel
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..6145
/db_xref="H-InvDB:HIT000248312"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="foetus"
/tissue_type="brain"
/db_xref="taxon:9606"
CDS 245..5368
/gene="TRPM3"
/product="long transient receptor potential channel 3"
/function="cation channel"
/note="splice variant: longer variant"
/db_xref="GOA:Q9HCF6"
/db_xref="H-InvDB:HIT000248312.13"
/db_xref="HGNC:HGNC:17992"
/db_xref="InterPro:IPR005821"
/db_xref="InterPro:IPR029583"
/db_xref="InterPro:IPR032415"
/db_xref="InterPro:IPR037162"
/db_xref="InterPro:IPR041491"
/db_xref="UniProtKB/Swiss-Prot:Q9HCF6"
/protein_id="CAD43604.1"
/translation="MPEPWGTVYFLGIAQVFSFLFSWWNLEGVMNQADAPRPLNWTIR
KLCHAAFLPSVRLLKAQKSWIERAFYKRECVHIIPSTKDPHRCCCGRLIGQHVGLTPS
ISVLQNEKNESRLSRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSF
DTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWI
FTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQTMS
NPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVA
LIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQ
LLVTIQKTFTYTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGA
NASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIEN
GVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGLVIEYLM
GGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDL
DDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASE
NDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAV
AAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPY
MSQAQEIHLQEKEAEEPEKPTKEKEEEDMELTAMLGRNNGESSRKKDEEEVQSKHRLI
PLGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLG
IEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSDGRVI
YCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAIL
FPNEEPSWKLAKNIFYMPYWMIYGEVFADQIDPPCGQNETREDGKIIQLPPCKTGAWI
VPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPP
PLIIFSHMTMIFQHLCCRWRKHESDPDERDYGLKLFITDDELKKVHDFEEQCIEEYFR
EKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHSMKASLQTVDIRLAQLEDLIGR
MATALERLTGLERAESNKIRSRTSSDCTDAAYIVRQSSFNSQEGNTFKLQESIDPAGE
ETMSPTSPTLMPRMRSHSFYSVNMKDKGGIEKLESIFKERSLSLHRATSSHSVAKEPK
APAAPANTLAIVPDSRRPSSCIDIYVSAMDELHCDIDPLDNSVNILGLGEPSFSTPVP
STAPSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNPWDSEPPMYH
TIERSKSSRYLATTPFLLEEAPIVKSHSFMFSPSRSYYANFGVPVKTAEYTSITDCID
TRCVNAPQAIADRAAFPGGLGDKVEDLTCCHPEREAELSHPSSDSEENEAKGRRATIA
ISSQEGDNSERTLSNNITVPKIERANSYSAEEPSAPYAHTRKSFSISDKLDRQRNTAS
LQNPFQRSKSSKPEGRGDSLSMRRLSRTSAFQSFESKHN"
BASE COUNT 1724 a 1535 c 1494 g 1392 t
ORIGIN
1 tccgaccaca ggctgtttta tgcaggctgt ccctcttctt caaaatcgtg catcccctcc
61 ccgaagcagc aggcagtgtg cctccattca gccacatttg gtatgcatga gcacggctgc
121 agagagaggg gaggtggctg ttttaagaag gttcaggggc tcaggcaagg ctacttgact
181 agtcttccaa gttccaggaa gcctctgccc taatggaatt tgcaggtgtg gagatgacca
241 tgggatgcca gagccgtggg ggaccgttta ttttctaggc attgctcagg ttttcagttt
301 cttgttttcc tggtggaatt tggaaggggt catgaatcag gctgatgctc ctcgacccct
361 aaactggacc atccggaagc tgtgccacgc agcctttctt ccatctgtca gacttctgaa
421 ggctcagaaa tcctggatag aaagagcatt ttataaaaga gaatgtgtcc acatcatacc
481 cagcaccaaa gacccccata ggtgttgctg tgggcgtctg ataggccagc atgttggcct
541 cacccccagt atctccgtgc ttcagaatga gaaaaatgaa agtcgcctct cccgaaatga
601 catccagtct gaaaagtggt ccatcagcaa acacactcaa ctcagcccta cggatgcttt
661 tgggaccatt gagttccaag gaggtggcca ttccaacaaa gccatgtatg tgcgagtatc
721 ttttgataca aaacctgatc tcctcttaca cctgatgacc aaggaatggc agttggagct
781 tcccaagctt ctcatctctg tccatggggg cctgcagaac tttgaactcc agccaaaact
841 caagcaagtc tttgggaaag ggctcatcaa agcagcaatg acaactggag cgtggatatt
901 cactggaggg gttaacacag gtgttattcg tcatgttggc gatgccttga aggatcatgc
961 ctctaagtct cgaggaaaga tatgcaccat aggtattgcc ccctggggaa ttgtggaaaa
1021 ccaggaggac ctcattggaa gagatgttgt ccggccatac cagaccatgt ccaatcccat
1081 gagcaagctc actgttctca acagcatgca ttcccacttc attctggctg acaacgggac
1141 cactggaaaa tatggagcag aggtgaaact tcgaagacaa ctggaaaagc atatttcact
1201 ccagaagata aacacaagaa tcggtcaagg tgttcctgtg gtggcactca tagtggaagg
1261 aggacccaat gtgatctcga ttgttttgga gtaccttcga gacacccctc ccgtgccagt
1321 ggttgtctgt gatgggagtg gacgggcatc ggacatcctg gcctttgggc ataaatactc
1381 agaagaaggc ggactgataa atgaatcttt gagggaccag ctgttggtga ctatacagaa
1441 gactttcaca tacactcgaa cccaagctca gcatctgttc atcatcctca tggagtgcat
1501 gaagaagaag gaattgatta cggtatttcg gatgggatca gaaggacacc aggacattga
1561 tttggctatc ctgacagctt tactcaaagg agccaatgcc tcggccccag accaactgag
1621 cttagcttta gcctggaaca gagtcgacat cgctcgcagc cagatcttta tttacgggca
1681 acagtggccg gtgggatctc tggagcaagc catgttggat gccttagttc tggacagagt
1741 ggattttgtg aaattactca tagagaatgg agtaagcatg caccgttttc tcaccatctc
1801 cagactagag gaattgtaca atacgagaca tgggccctca aatacattgt accacttggt
1861 cagggatgtc aaaaagggga acctgccccc agactacaga atcagcctga ttgacatcgg
1921 cctggtgatc gagtacctga tgggcggggc ttatcgctgc aactacacgc gcaagcgctt
1981 ccggaccctc taccacaacc tcttcggccc caagaggccc aaagccttga aactgctggg
2041 aatggaggat gatattccct tgaggcgagg aagaaagaca accaagaaac gtgaagaaga
2101 ggtggacatt gacttggatg atcctgagat caaccacttc cccttccctt tccatgagct
2161 catggtgtgg gctgttctca tgaagcggca gaagatggcc ctgttcttct ggcagcacgg
2221 tgaggaggcc atggccaagg ccctggtggc ctgcaagctc tgcaaagcca tggctcatga
2281 ggcctctgag aacgacatgg ttgacgacat ttcccaggag ctgaatcaca attccagaga
2341 ctttggccag ctggctgtgg agctcctgga ccagtcctac aagcaggacg aacagctggc
2401 catgaaactg ctgacgtatg agctgaagaa ctggagcaac gccacgtgcc tgcagcttgc
2461 cgtggctgcc aaacaccgcg acttcatcgc gcacacgtgc agccagatgc tgctcaccga
2521 catgtggatg ggccggctcc gcatgcgcaa gaactcaggc ctcaaggtaa ttctgggaat
2581 tctacttcct ccttcaatcc tcagcttgga gttcaagaac aaagacgaca tgccctatat
2641 gtctcaggcc caggaaatcc acctccaaga gaaggaggca gaagaaccag agaagcccac
2701 aaaggaaaaa gaggaagagg acatggagct cacagcaatg ttgggacgaa acaacgggga
2761 gtcctccagg aagaaggatg aagaggaagt tcagagcaag caccggttaa tccccctcgg
2821 cagaaaaatc tatgaattct acaatgcacc catcgtgaag ttctggttct acacactggc
2881 gtatatcgga tacctgatgc tcttcaacta tatcgtgtta gtgaagatgg aacgctggcc
2941 gtccacccag gaatggatcg taatctccta tattttcacc ctgggaatag aaaagatgag
3001 agagattctg atgtcagagc cagggaagtt gctacagaaa gtgaaggtat ggctgcagga
3061 gtactggaat gtcacggacc tcatcgccat ccttctgttt tctgtcggaa tgatccttcg
3121 tctccaagac cagcccttca ggagtgacgg gagggtcatc tactgcgtga acatcattta
3181 ctggtatatc cgtctcctag acatcttcgg cgtgaacaag tatttgggcc cgtatgtaat
3241 gatgatcgga aaaatgatga tagacatgat gtactttgtc atcattatgc tggtggttct
3301 gatgagcttt ggggtcgcca ggcaagccat cctttttccc aatgaggagc catcatggaa
3361 actggccaag aacatcttct acatgcccta ttggatgatt tatggggaag tgtttgcgga
3421 ccagatagac cctccctgtg gacagaatga gacccgagag gatggtaaaa taatccagct
3481 gcctccctgc aagacaggag cttggatcgt gccggccatc atggcctgct acctcttagt
3541 ggcaaacatc ttgctggtca acctcctcat tgctgtcttt aacaatacat tttttgaagt
3601 aaaatcgata tccaaccaag tctggaagtt tcagaggtat cagctcatca tgactttcca
3661 tgaaaggcca gttctgcccc caccactgat catcttcagc cacatgacca tgatattcca
3721 gcacctgtgc tgccgatgga ggaaacacga gagcgacccg gatgaaaggg actacggcct
3781 gaaactcttc ataaccgatg atgagctcaa gaaagtacat gactttgaag agcaatgcat
3841 agaagaatac ttcagagaaa aggatgatcg gttcaactca tctaatgatg agaggatacg
3901 ggtgacttca gaaagggtgg agaacatgtc tatgcggctg gaggaagtca acgagagaga
3961 gcactccatg aaggcttcac tccagaccgt ggacatccgg ctggcgcagc tggaagacct
4021 tatcgggcgc atggccacgg ccctggagcg cctgacaggt ctggagcggg ccgagtccaa
4081 caaaatccgc tcgaggacct cgtcagactg cacggacgcc gcctacattg tccgtcagag
4141 cagcttcaac agccaggaag ggaacacctt caagctccaa gagagtatag accctgcagg
4201 tgaggagacc atgtccccaa cttctccaac cttaatgccc cgtatgcgaa gccattcttt
4261 ctattcagtc aatatgaaag acaaaggtgg tatagaaaag ttggaaagta tttttaaaga
4321 aaggtccctg agcctacacc gggctactag ttcccactct gtagcaaaag aacccaaagc
4381 tcctgcagcc cctgccaaca ccttggccat tgttcctgat tccagaagac catcatcgtg
4441 tatagacatc tatgtctctg ctatggatga gctccactgt gatatagacc ctctggacaa
4501 ttccgtgaac atccttgggc taggcgagcc aagcttttca actccagtac cttccacagc
4561 cccttcaagt agtgcctatg caacacttgc acccacagac agacctccaa gccggagcat
4621 tgattttgag gacatcacct ccatggacac tagatctttt tcttcagact acacccacct
4681 cccagaatgc caaaacccct gggactcaga gcctccgatg taccacacca ttgagcgttc
4741 caaaagtagc cgctacctag ccaccacacc ctttcttcta gaagaggctc ccattgtgaa
4801 atctcatagc tttatgtttt ccccctcaag gagctattat gccaactttg gggtgcctgt
4861 aaaaacagca gaatacacaa gtattacaga ctgtattgac acaaggtgtg tcaatgcccc
4921 tcaagcaatt gcggacagag ctgccttccc tggaggtctt ggagacaaag tggaggactt
4981 aacttgctgc catccagagc gagaagcaga actgagtcac cccagctctg acagtgagga
5041 gaatgaggcc aaaggccgca gagccaccat tgcaatatcc tcccaggagg gtgataactc
5101 agagagaacc ctgtccaaca acatcactgt tcccaagata gagcgcgcca acagctactc
5161 ggcagaggag ccaagtgcgc catatgcaca caccaggaag agcttctcca tcagtgacaa
5221 actcgacagg cagcggaaca cagcaagcct gcaaaatccc ttccagagaa gcaagtcctc
5281 caagccggag ggccgagggg acagcctgtc catgaggaga ctgtccagaa catcggcttt
5341 ccaaagcttt gaaagcaagc acaactaaac cttcttaata tccgccacag aaggctcaag
5401 aatccagccc taaaattctc tccaactcca gtttttcccc tttccttgaa tcatacctgc
5461 tttattctta gctgagcaaa acaagcaatg ctttgggagg tgttaactca aaggtgactt
5521 ctgggccaca gatcaagaaa gcatttgatc tgacccagtg ccagacacag gggatttaag
5581 gcatgttcac acttgctggg cagggagggg gaagagaggg agaaggaagg gttagagatg
5641 aatgtgtatc cgcagtcaca gcagaaagcc atgagagcag gggaaacaag gggcttcgag
5701 cacgctccat gccaggaggc atctgtcgat ttctgaccat tatcaagagt tgtaggatgc
5761 agggctaaat tgcaaaataa aataaaatag ccagcgtaca caatgagata ttctaaactt
5821 ccattctgtt ttcttttcac attggctcca tcactggtga ctgatgaaga gcatcctctt
5881 tattcagtat aagccggcag caagcagttc tacctaacgt cccacatcct tctcatgcca
5941 acacttctgt aattgatcat tataaagaaa aaacaaggta acagtcatag ttcacctgtc
6001 tcttatctat tcacttctgg tgccacaact gtttatcctt ttttgaagaa aataagggaa
6061 cagaaatgcc tttttgtatt gcaatcgaaa tgaaagaaga gttgatgtta aaaaaaaaaa
6121 aaaaaaaaaa aaaaaaaaaa aaaaa
//