LOCUS AJ504806 3839 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for SMC1beta protein.
ACCESSION AJ504806
VERSION AJ504806.2
KEYWORDS SMC1BETA gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1
AUTHORS Cobbe N.
JOURNAL Submitted (03-AUG-2002) to the INSDC. Cobbe N., ICMB, University of
Edinburgh, Wellcome Trust Centre for Cell Biology, Mayfield Road,
Edinburgh, EH9 3JR, UNITED KINGDOM.
REMARK revised by [3]
REFERENCE 2
AUTHORS Cobbe N., Heck M.M.
TITLE The evolution of SMC proteins: phylogenetic analysis and structural
implications
JOURNAL Mol. Biol. Evol. 21(2), 332-347(2004).
PUBMED 14660695
REFERENCE 3 (bases 1 to 3839)
AUTHORS Cobbe N.
JOURNAL Submitted (03-JUN-2004) to the INSDC. Cobbe N., ICMB, University of
Edinburgh, Wellcome Trust Centre for Cell Biology, Mayfield Road,
Edinburgh, EH9 3JR, UNITED KINGDOM.
FEATURES Location/Qualifiers
source 1..3839
/db_xref="H-InvDB:HIT000248307"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 53..3760
/gene="SMC1BETA"
/product="SMC1beta protein"
/db_xref="GOA:Q8NDV3"
/db_xref="H-InvDB:HIT000248307.14"
/db_xref="HGNC:HGNC:11112"
/db_xref="InterPro:IPR003395"
/db_xref="InterPro:IPR010935"
/db_xref="InterPro:IPR024704"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR036277"
/db_xref="UniProtKB/Swiss-Prot:Q8NDV3"
/protein_id="CAD43404.2"
/translation="MAHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDA
LSFVMGEKIANLRVKNIQELIHGAHIGKPISSSASVKIIYVEESGEEKTFARIILGGC
SEFRFNDNLVSRSVYIAELEKIGIIVKAQNCLVFQGTVESISVKKPKERTQFFEEIST
SGELIGEYEEKKRKLQKAEEDAQFNFNKKKNIAAERRQAKLEKEEAERYQSLLEELKM
NKIQLQLFQLYHNEKKIHLLNTKLEHVNRDLSVKRESLSHHENIVKARKKEHGMLTRQ
LQQTEKELKSVETLLNQKRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIK
ALETELADLDAAWRSFEKQIEEEILHKKRDIELEASQLDRYKELKEQVRKKVATMTQQ
LEKLQWEQKTDEERLAFEKRRHGEVQGNLKQIKEQIEDHKKRIEKLEEYTKTCMDCLK
EKKQQEETLVDEIEKTKSRMSEFNEELNLIRSELQNAGIDTHEGKRQQKRAEVLEHLK
RLYPDSVFGRLFDLCHPIHKKYQLAVTKVFGRFITAIVVASEKVAKDCIRFLKEERAE
PETFLALDYLDIKPINERLRELKGCKMVIDVIKTQFPQLKKVIQFVCGNGLVCETMEE
ARHIALSGPERQKTVALDGTLFLKSGVISGGSSDLKYKARCWDEKELKNLRDRRSQKI
QELKGLMKTLRKETDLKQIQTLIQGTQTRLKYSQNELEMIKKKHLVAFYQEQSQLQSE
LLNIESQCIMLSEGIKERQRRIKEFQEKIDKVEDDIFQHFCEEIGVENIREFENKHVK
RQQEIDQKRYFYKKMLTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSEDIDHLKKAE
ENCLQTVNELMAKQQQLKDIRVTQNSSAEKVQTQIEEERKKFLAVDREVGKLQKEVVS
IQTSLEQKRLEKHNLLLDCKVQDIEIILLSGSLDDIIEVEMGTEAESTQATIDIYEKE
EAFEIDYSSLKEDLKALQSDQEIEAHLRLLLQQVASQEDILLKTAAPNLRALENLKTV
RDKFQESTDAFEASRKEARLCRQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNN
SAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPA
PFFVLDEVDAALDNTNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYD
DCMFSRVLTLDLSQYPDTEGQESSKRHGESR"
BASE COUNT 1396 a 668 c 883 g 892 t
ORIGIN
1 cgctttttcc gcgggcgctt gataacgcgg gtgaggcgtg gagggcggcg ccatggccca
61 cctggagctg ctgcttgtgg aaaatttcaa gtcgtggcgg ggccgccagg tcattggccc
121 cttccggagg ttcacctgca tcatcggccc caacggctct ggaaaatcta atgtaatgga
181 tgcacttagt tttgtaatgg gagagaaaat agctaattta agagtgaaaa atattcaaga
241 actcattcat ggagcacata ttggaaaacc tatttcttct tctgcaagtg taaaaattat
301 atatgtggag gaaagtggcg aagagaaaac atttgcaagg attattttag ggggatgctc
361 agaatttcgc tttaatgata atcttgtgag tcgttctgtt tacattgcag agttggaaaa
421 gataggcata atagtcaaag cacaaaattg tttggttttt cagggaactg tagagtcaat
481 ttcagtgaag aaacccaaag aaaggaccca gttttttgag gaaatcagca cttcaggaga
541 gcttatagga gaatatgaag aaaagaaaag aaagttacaa aaagccgaag aggatgcaca
601 gtttaacttt aataagaaaa aaaatatagc ggcagagcgc agacaagcaa aattagagaa
661 ggaagaggca gaacgttacc agagtctcct tgaagaactg aaaatgaaca agatacaact
721 gcagcttttt caactatacc ataatgagaa aaagattcat ctcctgaaca ccaagttaga
781 gcatgtgaat agggatttga gtgtcaaaag agagtctttg tctcatcatg aaaacatagt
841 taaagccagg aaaaaggaac atggaatgct aactagacaa ctacaacaaa cagaaaaaga
901 attaaaatcg gttgaaaccc ttttaaatca gaagaggcct cagtacatta aagccaaaga
961 aaacacttct caccacctta agaaattaga tgtggctaag aaatcaataa aggacagcga
1021 aaaacaatgt tctaaacagg aagatgatat aaaagccctg gagacagagc tggctgattt
1081 agatgctgca tggagaagtt ttgaaaagca gattgaggaa gaaattttac ataaaaagcg
1141 agacattgaa ctggaagcca gtcagctgga tcgttataaa gaacttaagg aacaagtaag
1201 aaagaaagta gctacaatga ctcaacaact ggaaaaactg cagtgggaac agaagacaga
1261 tgaagaaaga ctggcatttg aaaagaggag gcatggagaa gttcagggaa atctaaaaca
1321 aataaaagaa caaatagaag atcataaaaa acgaatagag aagttagagg agtatacaaa
1381 gacatgcatg gattgcttga aagagaaaaa acagcaagag gaaaccctag tggatgaaat
1441 tgaaaaaaca aaatcaagaa tgtctgaatt taatgaagaa ttgaatctta ttagaagtga
1501 attgcagaat gctgggattg atacccatga gggaaaacgt cagcaaaaga gagcagaggt
1561 tctggaacac cttaaaagac tgtacccaga ttctgtgttt ggaagactat ttgacctgtg
1621 tcatcctatt cataagaaat accagctggc tgttactaag gtttttggcc ggttcatcac
1681 tgccattgtt gtagcctctg aaaaggtagc aaaagattgt attcgatttc tgaaggagga
1741 aagagctgaa cctgagacat tcctcgctct agattacctt gatatcaagc caatcaatga
1801 aagactaagg gagcttaaag gctgtaaaat ggtgattgat gtcataaaga ctcagtttcc
1861 tcagctgaag aaagtgattc agtttgtgtg tggaaatggt cttgtttgtg agactatgga
1921 agaagcaagg catattgcac tcagtggacc tgaaagacag aaaacagtag ctcttgatgg
1981 aacattattt ttaaaatctg gagtgatctc tggagggtca agtgacttaa aatacaaggc
2041 tagatgctgg gatgagaaag agttaaagaa tctaagagac agacgaagcc agaaaatcca
2101 agagctaaag ggtttaatga agacactccg caaagaaaca gatttgaaac aaatacagac
2161 cctgatacag ggaactcaaa cacgactcaa atattcacaa aatgaactag agatgattaa
2221 gaagaagcac cttgttgctt tttaccagga acaatctcag ttacaaagtg aactactaaa
2281 tattgagtct caatgtatta tgttgagtga aggaatcaag gaacgacaac gaagaattaa
2341 agaatttcaa gaaaagatag ataaggtaga agacgatatc ttccaacact tctgtgaaga
2401 aattggcgtg gaaaatattc gtgaatttga gaacaaacat gttaaacggc aacaagaaat
2461 tgatcaaaaa aggtattttt ataaaaagat gttgactcgg cttaatgttc aacttgagta
2521 tagtcgcagt caccttaaga agaaactgaa taagatcaac acattaaaag aaactatcca
2581 gaaaggtagt gaagatattg atcacctaaa gaaggctgaa gaaaactgtc tgcagacagt
2641 gaatgaactc atggcaaagc agcagcaact taaggacata cgtgtcactc agaactccag
2701 tgccgagaaa gttcaaactc aaattgaaga ggaacggaag aagtttctgg ctgttgatag
2761 ggaagtgggg aaattgcaaa aagaagttgt aagtattcaa acttctctgg aacagaaacg
2821 attagagaag cataacttgc tgcttgattg caaagtgcaa gacattgaga taatcctttt
2881 gtcggggtca ctggatgaca tcattgaagt ggagatggga actgaagcag aaagtaccca
2941 ggcaacaatt gatatctatg aaaaagaaga agcctttgaa atagactaca gctctctaaa
3001 agaggatttg aaggctctac agtctgatca agaaatcgag gcccacctta ggctcttatt
3061 gcagcaagta gcatcccagg aagatatctt actgaaaaca gcagccccaa acctacgagc
3121 actggagaac ttaaagactg tcagagacaa gtttcaagag tccacagatg cttttgaggc
3181 cagcagaaag gaagccagac tgtgtaggca agagttcgag caagtgaaaa aaaggagata
3241 cgatcttttc acccagtgtt ttgagcatgt ctcaatctca attgatcaaa tctacaagaa
3301 gctctgcaga aacaacagcg cccaagcatt tcttagccca gagaaccctg aagaacctta
3361 cttggaggga attagctata actgtgtggc cccaggcaaa cggtttatgc caatggacaa
3421 tttgtcaggg ggagaaaagt gtgtggcagc cttggctctc ctgtttgctg tgcacagttt
3481 tcgtcctgcc ccattctttg ttttagatga agtggatgca gccctagaca atactaacat
3541 aggcaaagtg tcaagttaca tcaaagagca aactcaagac cagtttcaga tgatagtcat
3601 ctccctaaaa gaagagttct attccagagc cgacgcgctg atcggcatct atcctgagta
3661 cgatgactgc atgttcagcc gagttttgac cctagatctt tctcagtatc cagacactga
3721 aggccaagaa agcagcaaga gacacggaga gtcccgctag gggcagtcct gcagcagtca
3781 cctgatcact gttcagttcc cactctaata ctcacacagc tcctccacag gagacttct
//