LOCUS AJ459826 7163 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens mRNA for HBS1-like protein (HBS1 gene), splice variant 1. ACCESSION AJ459826 VERSION AJ459826.1 KEYWORDS alternative splicing; HBS1 gene; HBS1-like protein. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 7163) AUTHORS Close J.P. JOURNAL Submitted (07-MAY-2002) to the INSDC. Close J.P., Department of Molecular Haematology, King's College London, GKT School of Medicine, King's Denmark Hill Campus, Bessemer Road, London, SE5 9PJ, UNITED KINGDOM. REFERENCE 2 AUTHORS Close J.P., Game L.G., Clark B., Thein S.L. TITLE An integrated physical and transcript map of human 6q23 encompassing a quantitative trait loci for foetal haemaglobin expression. JOURNAL Thesis (2002), Department of Clinical Medicine, University of Oxford, Oxford, United Kingdom. COMMENT alternative splice variant sequences: AJ459827 FEATURES Location/Qualifiers source 1..7163 /db_xref="H-InvDB:HIT000248086" /organism="Homo sapiens" /chromosome="6" /map="6q23" /mol_type="mRNA" /db_xref="taxon:9606" CDS 194..2248 /gene="HBS1" /product="HBS1-like protein" /function="putative translation factor" /note="alternative splice variant 1" /db_xref="GOA:Q9Y450" /db_xref="H-InvDB:HIT000248086.15" /db_xref="HGNC:HGNC:4834" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR004160" /db_xref="InterPro:IPR004161" /db_xref="InterPro:IPR009000" /db_xref="InterPro:IPR009001" /db_xref="InterPro:IPR015033" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR037189" /db_xref="PDB:5LZW" /db_xref="PDB:5LZX" /db_xref="PDB:5LZY" /db_xref="PDB:5LZZ" /db_xref="UniProtKB/Swiss-Prot:Q9Y450" /protein_id="CAD30873.1" /translation="MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSR RDKPSVEPVEEYDYEDLKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILI EAVLKNKFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVP KVAKMTVSGKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANP PHTIQASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTL MGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFE TTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLL VRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGE NLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGK IEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGC IFCGPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKST GEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEI KE" regulatory 2484..2489 /gene="HSB1" /regulatory_class="polyA_signal_sequence" regulatory 2873..2878 /gene="HSB1" /regulatory_class="polyA_signal_sequence" BASE COUNT 2305 a 1209 c 1508 g 2141 t ORIGIN 1 tgaccctgag gcattgccgt cgcgcggtgc acagctaaga cgtcgcgctt gcgcaggcgc 61 tcggcgcaga ggcctgcggg aagccaagat ggcgcatagg ggttctccag gctgcagttg 121 gcgccttatc agtatctaag cggagtgttt tggaaggagt taaggggctg tggcaaacgc 181 cctctccgcc gtcatggccc ggcatcggaa tgttcgaggc tataactacg atgaagattt 241 tgaagatgat gatctctacg gccagtctgt agaggatgat tattgtattt cgccgtcaac 301 agctgctcag tttatttatt cacggcgtga caaaccttcc gttgagcctg tggaagaata 361 tgattatgaa gatctgaaag aatcttccaa ttctgtttca aaccatcagc tcagtggatt 421 tgatcaagct cgtctttatt catgccttga tcacatgaga gaggtacttg gagatgctgt 481 gccagatgaa atattaattg aagcagttct gaagaacaag tttgatgtgc agaaggcttt 541 gtcaggggtt ctggaacaag atagagtgca gagtttgaag gacaagaatg aggcaacagt 601 atctacagga aagatagcaa aaggaaaacc agtagattcc cagacatcgc gaagtgaatc 661 tgaaattgtg ccaaaagttg ctaaaatgac tgtatctgga aagaagcaaa ctatgggatt 721 tgaagtgcct ggagtatctt ctgaagaaaa tggtcatagt ttccacacac ctcaaaaagg 781 accgcccatt gaagatgcca ttgcttcttc cgatgttctt gagactgctt ctaaatctgc 841 taatccaccc cacacgattc aagcatcaga agagcagagt tcaaccccag caccggtgaa 901 aaagtctggc aagctgaggc agcaaataga tgtgaaggcg gaactggaga agcggcaagg 961 agggaagcag ctactcaact tagtggtcat tggtcatgtt gatgctggga aaagtactct 1021 gatgggccat atgctttatc ttctgggtaa tataaacaaa agaactatgc ataagtatga 1081 acaggagtct aaaaaggctg gcaaagcttc gtttgcatat gcatgggtct tggatgaaac 1141 tggcgaagaa agggaaaggg gagtaaccat ggatgttggt atgacaaagt ttgaaaccac 1201 aaccaaagtt attacattaa tggatgctcc aggccataag gacttcattc caaatatgat 1261 tacaggagca gcccaggcgg atgtagctgt tttagttgta gatgccagca ggggagagtt 1321 tgaagctgga tttgagactg gaggacaaac acgagagcat ggactcttgg tccgttctct 1381 gggagtgacg cagcttgcag ttgcagttaa taaaatggat caggttaatt ggcaacaaga 1441 aaggtttcaa gagattactg gaaaacttgg gcactttctt aagcaagcag gttttaagga 1501 gagtgatgta ggttttattc ctacaagtgg tctcagtggt gaaaatctaa tcacaagatc 1561 tcagtcaagt gaactcacaa aatggtataa aggactatgt ttattagaac aaattgattc 1621 ctttaagcct ccccagcgat ctattgacaa accttttaga ttatgtgtgt ccgatgtttt 1681 caaagatcaa ggatctggat tttgcataac tggtaaaata gaagctggtt atatccaaac 1741 tggtgaccga ctactggcaa tgcctcctaa tgaaacttgt accgtgaaag gaatcactct 1801 gcatgatgaa cctgtcgact gggcggcagc aggcgatcat gttagtctta ctttggttgg 1861 gatggatatc atcaaaatca atgttggctg catattttgt ggccccaaag tacccattaa 1921 agcttgcact cgtttcagag cccgaatcct catctttaat attgaaattc ctatcactaa 1981 aggatttcct gtgctgttac actaccaaac tgtcagtgaa cccgccgtta ttaaacgatt 2041 gattagtgtc ttaaacaaaa gcacgggtga agtcacaaag aaaaagccta agtttttgac 2101 taaaggccag aatgcattgg tagagctaca gacacaaaga ccaatagctc ttgagctata 2161 taaagacttt aaagagctgg ggaggttcat gctacgttac ggtggttcta caatagctgc 2221 tggtgttgtc actgagataa aagaatgatg ggtcagaatt tctaccacgt ttctggatac 2281 agtgaaatag ctaacctctg tttcaagaat gcagttatta agtcaaagga acaatgtgca 2341 attgatatgt ttttagatga gagagaaaaa ttaaagctaa aattagctgc aaagaagtat 2401 taataatcac ctctgcaaaa attctaagtt gccaactggc aaagaaagtc taatgttaaa 2461 aacaactttg cctttgaaac gttaataaat ggatttactt tgctaagatt tatggcaagt 2521 gtcaaaaata gtatctgaag atactgaatc atcatgaaat gaactctact tctggccaaa 2581 gcacaatgta tttgcagttt tctcttttga ttcaattata ctgcacatgt tttaaggaaa 2641 agtaacttaa ttgggttttt caggcagttg atatttgacc taagcttttt tttttttttt 2701 tttttccagt taatgctaag aaaagatttg gggaaggtta taataaaagt attttgtggt 2761 gaccataaga atgtccctcc ccaaaacaag taaacttgtg aaagtttaat ttggaattag 2821 tggaagctgt tcctttgaaa gccaagatat tatttaagtt gtaaagccag ctaataaaat 2881 gccttagttt gagcataata caaactgtgt tttgttcttt agacatttat gagattctct 2941 gccactaaca gtaaatatga tttaggggtt ttgtgggatc tttttcacct aagagtttcc 3001 tagctctgtc acatgaattc ttttttatcc taatggcaga tccaatttca tctcattcat 3061 ttttttaacc ataacttgct tttcccattc tcacttttag aattatacct atgatggccc 3121 tttctttatc ttgcttacct tatagattat aagtcccctg tgagtaagta agagtcatgt 3181 ttttctttaa agtttcaaca acaaacccca aggtttattt atttaacaac aggtattcgt 3241 tgaggtgcct tctgggtgca aggagcttta gagtagattt tgacctcagc tgaacctgga 3301 actctgatct gatagactgt ttatgataag cttttttttt tattagcagc gtgatttgta 3361 tatcgatggc ttaacatata caacagcatt tcttctccct gcaccttttc gtgaacctga 3421 cattttgaac ataagcaata acatctgtat ggtaaagtag gcagattata catgtgttgc 3481 ttagtgaatg attaccaagt gaacacactt ggtatattgc tttaccaaaa tacatgtgta 3541 gttgtcactt cagattcact gagttaagaa agttttattt aaatattaat attaatcaag 3601 aatttaacag atatatgtga cagaaatcta acttcaagtg actgaagcag aaagaaaaat 3661 ttttgaatga cataactgag aaaattagag gtagctctag ctttgattcc atttagatcg 3721 agcagctcac acaatgttag caaggactca tctccactct gccttccctg gtgctggttt 3781 tgctctcaaa ctctatatag aactctcggc cgggcgcggt ggctcacacc tgtaatcaaa 3841 acactttggg aggctgagtc gggaggatag cgtgagccca ggagtttgag accagctaag 3901 gcaatatagt gagaccatgt ctctacagaa aaaatttaaa aacagatcag ctgggtgtgg 3961 tgccacatgc ctgtagtccc agcttctcag gaggctgggg tgggaagatc acttgagccc 4021 aggaggtcga ggctgcagtg agccatgatc acatcactgc agtccagcct gggtgacaga 4081 gcaagacctg tcaccctgcc acccataaaa aacctcttct gtaatgccag gttcttgaca 4141 agatgtgata attccacact tacatcctca gatctcccat ccagggcaag gacagactaa 4201 aagagcatat cttctccaga agtcctagaa acatctcatc attgactatg attgaatttt 4261 atttattaat acttccctag gatatcctgt gtttgagtgt gaagttaata tcacacaaag 4321 catgtagcta acagttgtgt gagggttgga aattcagggt gctgttagga aggggaaatg 4381 gattggggtt taaggtaggg ggagtaaaaa caagaaacca tccactctgt atattatata 4441 agactgtgat cgaattaaga attttagttt acagtttagc ataaacaaat agtagtagaa 4501 atgaatgcat ttattcattc cttccttctc caatagtgtt taagtacaat ctttttattt 4561 gcattttatt gatgattgat tgtggttgaa aggagtggtg atattatttc gaggatccac 4621 tgtgtaagaa gactgttggc agtggaaggc tcgagttgat taagtgacaa agaggtaaag 4681 cagacatgcc caagcttggt tatgctctga tttcctaccc tgttactttc atccataatt 4741 tatagtacat ccattttgtg tcattttgct tcaggtattt cttgtcctga ctgtcttctt 4801 ttttatgatt ttactgtttc ttcacactaa tggctttgtc ctctgacttt gactctttgt 4861 gagattcttc tgagcagtta acctctagga taatgtggct tgaacacatt acagaactat 4921 gttttgactt gttagtatta ttcacacatt catgacaatt gagcctctct actgtgagaa 4981 atgttttaga ggccagtttc taggcatagc tgtttttctc ccatgagtat gcaaatcaat 5041 agttttaacc attgttaaaa tgcaatcata gtgacttcag aaaatttgga aaatacagaa 5101 aatataggga agaataaaat taacccacag ttctgtcacc taaaggtaac tgctgccaat 5161 gttttcatgt atttcttttc tgtctctcca atgcattttt ttacatagtt gtgagcgtta 5221 gccaagttat tttcatgttg ttatgtaatc aatatttttc aatagaagta ttagaggttt 5281 tttttattga tataaaaata acaattacag atcctgatat atagaagtta ttcaaaatta 5341 tacagttttc aaaaaatcaa gacaagtagg cccaatacaa actactgaat catcttctaa 5401 tttccctcta aaatatttat agaaatatgt aagtagaaaa acattcatcc tttcctcgtc 5461 taattatgat cctgccatat tccaggcaca agagaaagct ctggggcttg agtcttaata 5521 gggctgatag tccaaccagg ggacagggta tcataaagag ataattcaaa actttaagat 5581 tggagggtag gtgatggtag aaaattctgc ggcaaacatt tgttgatgct catcatttgt 5641 tgatgtcatc aaagatcacc agggcataat tataatcaaa attagtttta ttgatgcttg 5701 ctgcagcaag agagactgca caccactggg gtctatgggt gcttctcagt gggaaggtgt 5761 aaggaggggc ttgctaagaa tttgagcaca tgtagctaat tttaaggagg gctcaagtga 5821 gcaagggttt cttctggatt gagtgctgtc agaaagtgga ttgagtgctg tcagaaagtg 5881 ggagtgattt tgcaactggg tatcttaatt tttatgttgt gggtgggagg aaaggaaaga 5941 agcaacagtc acccatgtta gccacaagaa gaggttggct gtttatggtt tgcacagtga 6001 ctttgttttt atctgtgctc aggcatgatt acagtatctc attttatccg gattacagtg 6061 acctcatctg atgttagaga tttgagaatt gttaaatgtt cagcaggaga acgccaccgc 6121 ctagtgtgaa tgctaggtca gaagctgctt tttcacactg aaaccattta agtatgtaca 6181 aataagttaa tagtgtaaat gtaggtgtaa aatacaatgc aaaacaaaat aatgaagtaa 6241 gtgaattaaa ttattgcacc aaatatgggg atatgaaata gggaaagaaa agcattaagt 6301 tacttatagt ccataaaggg actacattat tttgttactc tgataatccc ataaaacaaa 6361 gttttaagaa tgtttacagt aaccatgaat ggaattagtg aaactattca tatcaatgca 6421 aaaaaaaaaa aaaaaaaaag caaagaaact aagtctgtac agcaaaagat ggtaaggaaa 6481 caagaaaatt aaatgaagac aaaggttgtg attattacag taaatgaaaa taggttttta 6541 tctttaaaat gtagactcaa actgcaaagc taatgatatg ctatctgcaa aatattccta 6601 ttttgtaaat aaataaaacc atagatttaa agaagaaagg gcacagatgt actggggaga 6661 caaaaataac tgatccgttg ggtgtatacc atgtgccaag caattttcat atactcattt 6721 aacatgacat atctataatt atatgaggca gatattatta acctcagtct atagatgaga 6781 agactaaagc tcagagggat tgctaaaaac tagtaaataa attatggaac catgatttga 6841 atttagattt aagtctgact gaggcatgtt caaagacact acactgcctc tccagaaatc 6901 aggagtagca atattaacac tggacaaaga atttaaagca agtaaaaaaa aattaagaga 6961 atttcatatt aataacaagt ataatgcaca ataaaactgt accaaatgac ataaaaatgc 7021 ataatgaaat ttattagaaa ttaaaaatta aagggcatag ttacaattat tgaggaattc 7081 tcatagctct gccttataga tcatgtaaac aaacaaggtc atagaggact taaatagcaa 7141 agcagaaaaa aaaaaaaaaa aaa //