LOCUS AJ459808 4659 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for histone decetylase 9b (HDAC9B gene).
ACCESSION AJ459808
VERSION AJ459808.1
KEYWORDS HDAC9B gene; histone decetylase 9b.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4659)
AUTHORS David D.
JOURNAL Submitted (03-MAY-2002) to the INSDC. David D., Centro de Genetica
Humana, Instituto Nacional de Saude, Av. Padre Cruz, Lisbon,
1649-016, PORTUGAL.
REFERENCE 2
AUTHORS David D., Cardoso J., Marques B., Marques R., Silva E.D.,
Santos H., Boavida M.G.
TITLE Molecular characterization of a familial translocation implicates
disruption of HDAC9 and possible position effect on TGFbeta2 in the
pathogenesis of Peters' anomaly
JOURNAL Genomics 81(5), 489-503(2003).
PUBMED 12706107
FEATURES Location/Qualifiers
source 1..4659
/db_xref="H-InvDB:HIT000248083"
/organism="Homo sapiens"
/chromosome="1"
/map="1q41"
/mol_type="mRNA"
/tissue_type="lens"
/db_xref="taxon:9606"
5'UTR 1..150
/gene="HDAC9B"
/experiment="experimental evidence, no additional details
recorded"
CDS 151..3351
/gene="HDAC9B"
/product="histone decetylase 9b"
/db_xref="GOA:Q9UKV0"
/db_xref="H-InvDB:HIT000248083.15"
/db_xref="HGNC:HGNC:14065"
/db_xref="InterPro:IPR000286"
/db_xref="InterPro:IPR017320"
/db_xref="InterPro:IPR023696"
/db_xref="InterPro:IPR023801"
/db_xref="InterPro:IPR024643"
/db_xref="InterPro:IPR037138"
/db_xref="UniProtKB/Swiss-Prot:Q9UKV0"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAD30851.1"
/translation="MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREK
QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEK
EQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDT
PTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKT
ASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPS
SPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGL
PAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSH
QALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQ
SAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEE
LQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESG
EQAAFMQQPFLEPTHTRALSVRQAPLAAVGMDGLEKHRLVSRTHSSPAASVLPHPAMD
RPLQPGSATGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQG
RKASLEEIQLVHSEHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDT
IWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSV
AITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGA
PNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFD
ALEGHTPPLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLTAICDASEACVNAL
LGNELEPLAEDILHQSPNMNAVISLQKIIEIQSKYWKSVRMVAVPRGCALAGAQLQEE
TETVSALASLTVDVEQPFAQEDSRTAGEPMEEEPAL"
3'UTR 3352..4659
/gene="HDAC9B"
BASE COUNT 1306 a 1107 c 1073 g 1173 t
ORIGIN
1 ggggaagaga ggcacagaca cagataggag aagggcaccg gctggagcca cttgcaggac
61 tgagggtttt tgcaacaaaa ccctagcagc ctgaagaact ctaagccaga tggggtggct
121 ggacgagagc agctcttggc tcagcaaaga atgcacagta tgatcagctc agtggatgtg
181 aagtcagaag ttcctgtggg cctggagccc atctcacctt tagacctaag gacagacctc
241 aggatgatga tgcccgtggt ggaccctgtt gtccgtgaga agcaattgca gcaggaatta
301 cttcttatcc agcagcagca acaaatccag aagcagcttc tgatagcaga gtttcagaaa
361 cagcatgaga acttgacacg gcagcaccag gctcagcttc aggagcatat caaggaactt
421 ctagccataa aacagcaaca agaactccta gaaaaggagc agaaactgga gcagcagagg
481 caagaacagg aagtagagag gcatcgcaga gaacagcagc ttcctcctct cagaggcaaa
541 gatagaggac gagaaagggc agtggcaagt acagaagtaa agcagaagct tcaagagttc
601 ctactgagta aatcagcaac gaaagacact ccaactaatg gaaaaaatca ttccgtgagc
661 cgccatccca agctctggta cacggctgcc caccacacat cattggatca aagctctcca
721 ccccttagtg gaacatctcc atcctacaag tacacattac caggagcaca agatgcaaag
781 gatgatttcc cccttcgaaa aactgcctct gagcccaact tgaaggtgcg gtccaggtta
841 aaacagaaag tggcagagag gagaagcagc cccttactca ggcggaagga tggaaatgtt
901 gtcacttcat tcaagaagcg aatgtttgag gtgacagaat cctcagtcag tagcagttct
961 ccaggctctg gtcccagttc accaaacaat gggccaactg gaagtgttac tgaaaatgag
1021 acttcggttt tgccccctac ccctcatgcc gagcaaatgg tttcacagca acgcattcta
1081 attcatgaag attccatgaa cctgctaagt ctttatacct ctccttcttt gcccaacatt
1141 accttggggc ttcccgcagt gccatcccag ctcaatgctt cgaattcact caaagaaaag
1201 cagaagtgtg agacgcagac gcttaggcaa ggtgttcctc tgcctgggca gtatggaggc
1261 agcatcccgg catcttccag ccaccctcat gttactttag agggaaagcc acccaacagc
1321 agccaccagg ctctcctgca gcatttatta ttgaaagaac aaatgcgaca gcaaaagctt
1381 cttgtagctg gtggagttcc cttacatcct cagtctccct tggcaacaaa agagagaatt
1441 tcacctggca ttagaggtac ccacaaattg ccccgtcaca gacccctgaa ccgaacccag
1501 tctgcacctt tgcctcagag cacgttggct cagctggtca ttcaacagca acaccagcaa
1561 ttcttggaga agcagaagca ataccagcag cagatccaca tgaacaaact gctttcgaaa
1621 tctattgaac aactgaagca accaggcagt caccttgagg aagcagagga agagcttcag
1681 ggggaccagg cgatgcagga agacagagcg ccctctagtg gcaacagcac taggagcgac
1741 agcagtgctt gtgtggatga cacactggga caagttgggg ctgtgaaggt caaggaggaa
1801 ccagtggaca gtgatgaaga tgctcagatc caggaaatgg aatctgggga gcaggctgct
1861 tttatgcaac agcctttcct ggaacccacg cacacacgtg cgctctctgt gcgccaagct
1921 ccgctggctg cggttggcat ggatggatta gagaaacacc gtctcgtctc caggactcac
1981 tcttcccctg ctgcctctgt tttacctcac ccagcaatgg accgccccct ccagcctggc
2041 tctgcaactg gaattgccta tgaccccttg atgctgaaac accagtgcgt ttgtggcaat
2101 tccaccaccc accctgagca tgctggacga atacagagta tctggtcacg actgcaagaa
2161 actgggctgc taaataaatg tgagcgaatt caaggtcgaa aagccagcct ggaggaaata
2221 cagcttgttc attctgaaca tcactcactg ttgtatggca ccaaccccct ggacggacag
2281 aagctggacc ccaggatact cctaggtgat gactctcaaa agtttttttc ctcattacct
2341 tgtggtggac ttggggtgga cagtgacacc atttggaatg agctacactc gtccggtgct
2401 gcacgcatgg ctgttggctg tgtcatcgag ctggcttcca aagtggcctc aggagagctg
2461 aagaatgggt ttgctgttgt gaggccccct ggccatcacg ctgaagaatc cacagccatg
2521 gggttctgct tttttaattc agttgcaatt accgccaaat acttgagaga ccaactaaat
2581 ataagcaaga tattgattgt agatctggat gttcaccatg gaaacggtac ccagcaggcc
2641 ttttatgctg accccagcat cctgtacatt tcactccatc gctatgatga agggaacttt
2701 ttccctggca gtggagcccc aaatgaggtt ggaacaggcc ttggagaagg gtacaatata
2761 aatattgcct ggacaggtgg ccttgatcct cccatgggag atgttgagta ccttgaagca
2821 ttcaggacca tcgtgaagcc tgtggccaaa gagtttgatc cagacatggt cttagtatct
2881 gctggatttg atgcattgga aggccacacc cctcctctag gagggtacaa agtgacggca
2941 aaatgttttg gtcatttgac gaagcaattg atgacattgg ctgatggacg tgtggtgttg
3001 gctctagaag gaggacatga tctcacagcc atctgtgatg catcagaagc ctgtgtaaat
3061 gcccttctag gaaatgagct ggagccactt gcagaagata ttctccacca aagcccgaat
3121 atgaatgctg ttatttcttt acagaagatc attgaaattc aaagcaagta ttggaagtca
3181 gtaaggatgg tggctgtgcc aaggggctgt gctctggctg gtgctcagtt gcaagaggag
3241 acagagaccg tttctgccct ggcctcccta acagtggatg tggaacagcc ctttgctcag
3301 gaagacagca gaactgctgg tgagcctatg gaagaggagc cagccttgtg aagtgccaag
3361 tccccctctg atatttcctg tgtgtgacat cattgtgtat ccccccaccc cagtaccctc
3421 agacatgtct tgtctgctgc ctgggtggca cagattcaat ggaacataaa cactgggcac
3481 aaaattctga acagcagctt cacttgttct ttggatggac ttgaaagggc attaaagatt
3541 ccttaaacgt aaccgctgtg attctagagt tacagtaaac cacgattgga agaaactgct
3601 tccagcatgc ttttaatatg ctgggtgacc cactcctaga caccaagttt gaactagaaa
3661 cattcagtac agcactagat attgttaatt tcagaagcta tgacagccag tgaaattttg
3721 ggcaaaacct gagacatagt cattcctgac attctgatca gctttttttg gggtaatttg
3781 tttttcaaac agtcttaact tgtttacaag atttgctttt agctatgaac ggatcgtaat
3841 tccacccaga atgtaatgtt tcttgtttgt ttgttttgtt ttgttagggt ttttttctca
3901 actttaacac acagttcaac tgttcctagt aaaagttcaa gatggaggaa ctagcatgag
3961 gcttttttca gtatctcgaa gtccaaatgc caaaggaacc tcacacactg tttgtaatgg
4021 tgcaatattt tatatcactt ttttttaaac atccccaaca tctttgtgtt ctcacacaca
4081 ggcaatttgc aatgttgcaa ttgtgttgga gaatgaagtc cccccacctc ccagccacac
4141 acacatcctt tgttctcatg acagtaggtc tgagcaaatg ttccaccaag cattttcagt
4201 gtctttgaaa agcacgtaac ttttcaaagg tggtcttaat ttgttgcata tctatcaagg
4261 acttattcac tcacctttcc ttttctgccc tctatcaatt gatttcttct tacctttcat
4321 cattcattcc ttcctttaga aaaactgaag attacccata atctcctctt attacttgag
4381 ggccttgact atttagttta ttttgtttac tttacaggtt aacacagttg ttttgtctga
4441 ttgcatttta ttaactgtga agccgttgaa atgaatatca cttaagcaac gttgctaaat
4501 ttctatgtgt ttgaaatgtg ttaatgaagg cactgcttat ttgtagtcac cttgaactga
4561 cttaacctag aagctgtgcc ttcttgtgaa aaaaaaaaaa aacaaaaaca aaaaacagcc
4621 tttaaacaag tttccttagt gtcaaaagtt aaaaataaa
//