LOCUS AJ430580 3031 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA for tyrosine phosphatase epsilon PD1 (PTPRE
gene).
ACCESSION AJ430580
VERSION AJ430580.1
KEYWORDS alternative splicing; PTPRE gene; tyrosine phosphatase epsilon PD1.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3031)
AUTHORS Aasheim H.C.
JOURNAL Submitted (11-FEB-2002) to the INSDC. Aasheim H.C., Immunology, The
Norwegian Radium Hospital, Montebello, N-0310 Oslo, NORWAY.
REFERENCE 2
AUTHORS Wabakken T., Hauge H., Funderud S., Aasheim H.C.
TITLE Characterisation, expression and functional aspects of a novel
protein tyrosine phosphatase epsilon isoform
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..3031
/db_xref="H-InvDB:HIT000247933"
/organism="Homo sapiens"
/chromosome="10"
/map="10q26"
/mol_type="mRNA"
/cell_line="Reh"
/db_xref="taxon:9606"
CDS 19..1629
/gene="PTPRE"
/product="tyrosine phosphatase epsilon PD1"
/note="alternative"
/db_xref="GOA:Q8TE48"
/db_xref="H-InvDB:HIT000247933.14"
/db_xref="InterPro:IPR000242"
/db_xref="InterPro:IPR000387"
/db_xref="InterPro:IPR003595"
/db_xref="InterPro:IPR016130"
/db_xref="InterPro:IPR029021"
/db_xref="UniProtKB/TrEMBL:Q8TE48"
/protein_id="CAD23182.1"
/translation="MSNRSSFSRLTWFRKQRKAVVSTSDKKMPNGILEEQEQQRVMLL
SRSPSGPKKYFPIPVEHLEEEIRIRSADDCKQFREEFNSLPSGHIQGTFELANKEENR
EKNRYPNILPNDHSRVILSQLDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDF
WRMVWEQKSATIVMLTNLKERKEEKCHQYWPDQGCWTYGNIRVCVEDCVVLVDYTIRK
FCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVH
CSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALL
EYYLYGDTELDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPA
NMKKARVIQIIPCKAPVAWLGQGWGWAGAGGFHPGEAIDRLPLCTRVKSRVSSGLRLR
APVCCTKCQVEKTPVKHQLTQTVLHGSQASCLGYELADAGGTPRLISGEGFTEAGDLR
QARLGIPCLIPCLPKPGQRPASPLHRGA"
BASE COUNT 833 a 736 c 827 g 635 t
ORIGIN
1 ccttagcgcg gctcagccat gagcaacagg agtagctttt cccggctcac ctggttcagg
61 aagcagagga aagctgtggt cagcaccagc gacaagaaga tgcccaacgg aatcttggag
121 gagcaagagc agcaaagggt gatgctgctc agcaggtcac cctcagggcc caagaagtat
181 tttcccatcc ccgtggagca cctggaggag gagatccgta tcagatccgc cgacgactgc
241 aagcagtttc gggaggagtt caactcattg ccatctggac acatacaagg aacttttgaa
301 ctggcaaata aagaagaaaa cagagaaaaa aacagatatc ccaacatcct tcccaatgac
361 cattctaggg tgattctgag ccaactggat ggaattccct gttcagacta catcaatgct
421 tcctacatag atggttacaa agagaagaat aaattcatag cagctcaagg tcccaaacag
481 gaaacggtta acgacttctg gagaatggtc tgggagcaaa agtctgcgac catcgtcatg
541 ttaacaaact tgaaagaaag gaaagaggaa aagtgccatc agtactggcc cgaccaaggc
601 tgctggacct atggaaacat ccgggtgtgc gtggaggact gcgtggtttt ggtcgactac
661 accatccgga agttctgcat acagccacag ctccccgacg gctgcaaagc ccccaggctg
721 gtctcacagc tgcacttcac cagctggccc gacttcggag tgccttttac ccccattggg
781 atgctgaagt tcctcaagaa agtaaagacg ctcaaccccg tgcacgctgg gcccatcgtg
841 gtccactgta gcgcgggcgt gggccggacg ggcaccttca ttgtgatcga tgccatgatg
901 gccatgatgc acgcggagca gaaggtggat gtgtttgaat ttgtgtctcg aatccgtaat
961 cagcgccctc agatggttca aacggatatg cagtacacgt tcatctacca agccttactc
1021 gagtactacc tctacgggga cacagagctg gacgtgtcct ccctggagaa gcacctgcag
1081 accatgcacg gcaccaccac ccacttcgac aagatcgggc tggaggagga gttcaggaaa
1141 ttgacaaatg tccggatcat gaaggagaac atgaggacgg gcaacttgcc ggcaaacatg
1201 aagaaggcca gggtcatcca gatcatcccg tgtaaggcac ccgtggcgtg gcttgggcag
1261 ggctggggct gggctggtgc cggaggcttt catcctggag aagccattga ccgcttaccc
1321 ctgtgcacca gggtcaaaag cagggtgtcc tctggcctca ggctaagggc tcctgtgtgc
1381 tgtaccaaat gtcaggtaga aaagacacct gtgaagcacc agctgaccca gacagtcctg
1441 catgggtctc aggcaagctg cttgggatat gagcttgcag atgcgggagg gacgccgagg
1501 ctgatttcag gggagggctt cacagaagct ggagatttgc ggcaggcacg acttgggatt
1561 ccttgtctca ttccttgtct ccccaagcct gggcagaggc ccgcctcccc cttacacaga
1621 ggggcctgag ccacccagcc gaggccatgc aggtgaactc agctgagacc acctaggaaa
1681 aggctgtggc cttgaggagg acaagaaatg ggcctagggt agagtcagga cactggtctg
1741 ccacccaggt catgggagag ggaaggagga cctggcaggt gtgggaggag tggaggcaaa
1801 gctggcaaga agacagggcc acatgcagtg ggcaggggag tgggaatcgg gaggctcacc
1861 aagtgggaaa aagagaaact tgagaaaccc ggccccaaag cagactccac agggatccga
1921 ggaactaggg agggaggtgg gagatgcccc gcttgggagg agggtgtgcc tcgttataga
1981 cttgtcctcg acagagtcac agctcaacaa acaccatctg gaaacagctg ggagcaggcc
2041 tgctgcagca gggtctcccc gagcactgca gatgacttca accgagtgat cctttccatg
2101 aaaaggggtc aagaatacac agactacatc aacgcatcct tcatagacgg ctaccgacag
2161 aaggactatt tcatcgccac ccaggggcca ctggcacaca cggttgagga cttctggagg
2221 atgatctggg aatggaagtc ccacactatc gtgatgctga cggaggtgca ggagagagag
2281 caggataaat gctaccagta ttggccaacc gagggctcag ttactcatgg agaaataacg
2341 attgagataa agaatgatac cctttcagaa gccatcagta tacgagactt tctggtcact
2401 ctcaatcagc cccaggcccg ccaggaggag caggtccgag tagtgcgcca gtttcacttc
2461 cacggctggc ctgagatcgg gattcccgcc gagggcaaag gcatgattga cctcatcgca
2521 gccgtgcaga agcagcagca gcagacaggc aaccacccca tcaccgtgca ctgcagtgcc
2581 ggagctgggc gaacaggtac attcatagcc ctcagcaaca ttttggagcg agtaaaagcc
2641 gagggacttt tagatgtatt tcaagctgtg aagagtttac gacttcagag accacatatg
2701 gtgcaaaccc tggaacagta tgaattctgc tacaaagtgg tacaagattt tattgatata
2761 ttttctgatt atgctaattt caaatgaaga ttcctgcctt aaaatatttt ttaatttaat
2821 ggtcagtata ttttgtaaaa atcatgttaa tttatttcat agttgacatt aatatcttcc
2881 ctaatttctt tgtatatatt ttgttatgcc ttaaaggcca cctgctatac agttgttaaa
2941 tcttaaatat gctttttaaa aattggaata atgtattaag gtcaaataat atcccataaa
3001 atatatattt ctgctaataa aaaaaaactt t
//