LOCUS       AJ420812                4301 bp    mRNA    linear   HUM 07-OCT-2008
DEFINITION  Homo sapiens mRNA for choline transporter-like protein 1, splice
            variant a (CTL1 gene).
ACCESSION   AJ420812
VERSION     AJ420812.1
KEYWORDS    alternative splicing; choline transporter-like protein 1; CTL1
            gene.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   O'Regan S.
  JOURNAL   Submitted (21-NOV-2001) to the INSDC. O'Regan S., Neurobiologie
            Cellulaire et Moleculaire , C.N.R.S., 1 av de la Terrasse, F-91198
            Gif-sur-Yvette, FRANCE.
REFERENCE   2
  AUTHORS   Meunier F.M., Traiffort E., Ruat M., O'Regan S.
  TITLE     Alternate splicing of the CTL1 gene in human
  JOURNAL   Unpublished.
COMMENT     Related sequence: AJ245620
FEATURES             Location/Qualifiers
     source          1..4301
                     /db_xref="H-InvDB:HIT000247894"
                     /organism="Homo sapiens"
                     /chromosome="9"
                     /map="9q31.2"
                     /mol_type="mRNA"
                     /cell_line="ICB112"
                     /tissue_type="Ewing's sarcoma"
                     /db_xref="taxon:9606"
     CDS             43..2016
                     /gene="CTL1"
                     /product="choline transporter-like protein 1, splice
                     variant a"
                     /function="choline transport"
                     /note="alternate'"
                     /db_xref="GOA:Q8WWI5"
                     /db_xref="H-InvDB:HIT000247894.14"
                     /db_xref="HGNC:HGNC:18798"
                     /db_xref="InterPro:IPR007603"
                     /db_xref="UniProtKB/Swiss-Prot:Q8WWI5"
                     /protein_id="CAD12764.1"
                     /translation="MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGF
                     ICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL
                     INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCP
                     KLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGL
                     CLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTP
                     EQLQIAEDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLL
                     VFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGL
                     IWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFII
                     TLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINS
                     TNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYT
                     VWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLME
                     FVENSRKAMKEAGKGGVADSRELKPMASGASSA"
BASE COUNT         1258 a          817 c          871 g         1355 t
ORIGIN      
        1 gctgcgcgca cgcgaccgca tccgggctcc ttcggccccg ccatgggctg ctgcagctcc
       61 gcttcctccg ccgcgcagag ctccaaacga gaatggaagc cgctggagga ccgtagctgc
      121 acagacatac catggctgct gctcttcatc ctcttctgca ttgggatggg atttatttgt
      181 ggcttttcaa tagcaacagg tgcagcagca agactagtgt caggatacga cagctatgga
      241 aatatctgtg ggcagaaaaa tacaaagttg gaagcaatac caaacagtgg catggaccac
      301 acccagcgga agtatgtatt ctttttggat ccatgcaacc tggacttgat aaaccggaag
      361 attaagtctg tagcactgtg tgtagcagcg tgtccaaggc aagaactgaa aactctgagt
      421 gatgttcaga agtttgcaga gataaatggt tcagccctat gtagctacaa cctaaagcct
      481 tctgaataca ctacatctcc aaaatcttct gttctctgcc ccaaactacc agttccagcg
      541 agtgcaccta ttccattctt ccatcgctgt gctcctgtga acatttcctg ctatgccaag
      601 tttgcagagg ccctgatcac ctttgtcagt gacaatagtg tcttacacag gctgattagt
      661 ggagtaatga ccagcaaaga aattatattg ggactttgct tgttatcact agttctatcc
      721 atgattttga tggtgataat caggtatata tcaagagtac ttgtgtggat cttaacgatt
      781 ctggtcatac tcggttcact tggaggcaca ggtgtactat ggtggctgta tgcaaagcaa
      841 agaaggtctc ccaaagaaac tgttactcct gagcagcttc agatagctga agacaatctt
      901 cgggccctcc tcatttatgc catttcagct acagtgttca cagtgatctt attcctgata
      961 atgttggtta tgcgcaaacg tgttgctctt accatcgcct tgttccacgt agctggcaag
     1021 gtcttcattc acttgccact gctagtcttc caacccttct ggactttctt tgctcttgtc
     1081 ttgttttggg tgtactggat catgacactt ctttttcttg gcactaccgg cagtcctgtt
     1141 cagaatgagc aaggctttgt ggagttcaaa atttctgggc ctctgcagta catgtggtgg
     1201 taccatgtgg tgggcctgat ttggatcagt gaatttattc tagcatgtca gcagatgaca
     1261 gtggcaggag ctgtggtaac atactatttt actagggata aaaggaattt gccatttaca
     1321 cctattttgg catcagtaaa tcgccttatt cgttaccacc taggtacggt ggcaaaagga
     1381 tctttcatta tcacattagt caaaattccg cgaatgatcc ttatgtatat tcacagtcag
     1441 ctcaaaggaa aggaaaatgc ttgtgcacga tgtgtgctga aatcttgcat ttgttgcctt
     1501 tggtgtcttg aaaagtgcct aaattattta aatcagaatg catacacagc cacagctatc
     1561 aacagcacca acttctgcac ctcagcaaag gatgcctttg tcattctggt ggagaatgct
     1621 ttgcgagtgg ctaccatcaa cacagtagga gattttatgt tattccttgg caaggtgctg
     1681 atagtctgca gcacaggttt agctgggatt atgctgctca actaccagca ggactacaca
     1741 gtatgggtgc tgcctctgat catcgtctgc ctctttgctt tcctagtcgc tcattgcttc
     1801 ctgtctattt atgaaatggt agtggatgta ttattcttgt gttttgccat tgatacaaaa
     1861 tacaatgatg ggagccctgg cagagaattc tatatggata aagtgctgat ggagtttgtg
     1921 gaaaacagta ggaaagcaat gaaagaagct ggtaagggag gcgtcgctga ttccagagag
     1981 ctaaagccga tggcttcggg agcaagttct gcttgaacct agccgacggt tatggaaacc
     2041 cattgacatt ccaaaacaat atatacacac acacataaat cagccaaaat cagagaaaag
     2101 gaacagggat ttaatacctt ttttatgctt atttttgtca aacatgtact cctttcatac
     2161 gggtggcttt tacaaggcaa cttccgtcat ttaatgtttt caactgtaat tgtcttaatg
     2221 gaaatgttaa aattcatatc tgattaacat ttttaataac ttagaggaga ttttaacttt
     2281 atttaaaaat aggtaaaatt attgtaccta attatgtcta aagtttattc aggggtaatt
     2341 tccctgatgt ctgtataaaa tcaagatctt attttactga tgcataagtc ctagtgggtc
     2401 aagactaggc atatgctttc agataaataa ggaattactc caatcagttt tccccaatca
     2461 aagaagccat gtcattttac ttttagaaac atacaattgg gcccaatatg ggaattttca
     2521 taatagttca tacatttgtc agccaacatt aaaaggtaac caactcctca ggtatttgta
     2581 gtttacccta acgcttcttt aaaagaaagt aggtaaaaaa agaaaagggt agataatctt
     2641 tcgtatgcaa acttttccct tatattttgt ctttctttcc tttttgactt tagtagcatc
     2701 ctccacacat ttgtgtgcct gatttgaaag gaagctgggg cacccagcga gtttagcctt
     2761 taagtttctg tgtattgatt tgcagattaa gtaatgctga gaggaataaa gaagggacag
     2821 aaacatggaa cataaagcat tgaaaattcc ggtgcttggg cttcggcttc agagtaacgt
     2881 cagtggctta gggttaaacg gccattttat tcaaatgctt gctatacaat ctgaaaacac
     2941 actggcaggt gctcctctcc ttggcaattc attgagtatc cagagttcta cgatgtttaa
     3001 ctgaagaatt ggctaatgtt ttgatcctcc agtgtgactg ttgtttttgt ttgggggtgg
     3061 gtttggggtt ttttgctttt ttattcctga agcttaccag atatgaatgg ctaatactcc
     3121 attgttctgc ttgttgtaat ggtgaatgct ttaagaaaaa aaagtgtaat ttgctaagaa
     3181 taattcatga tctgtttatg cgataactcc tttttgttac aattttttta aaaaaagcta
     3241 tttttgttaa tgtaaagtaa atatttcaga gcaaattttt taaacttatt gcactaaata
     3301 caggctctgt acaaaaaaaa aaaaaaaaaa gcctcagcat tttatcattc catggaagga
     3361 gaatcttttg aaagaaagca ttgcctccta ccagaactag acagtgaatt agatcggtat
     3421 tatggaaatg catacaagta atgtcactag ggcttaataa gcagccgttt gctaatgtgc
     3481 ttcctttcaa agggttggac ctttaaattg ctgcaaaagg taaattgtat ttttttttaa
     3541 gtattggtgt tctttactct agctaggcta aaatttgcta aatgccttgg tttcttttaa
     3601 aagttcatgt aatatttctg atttttcaga atatttgcaa taagagtctg gattttaaaa
     3661 aacacatgca tacacacaat taagagctca tgtcttagca agatctggga aaccaacatt
     3721 gcgagagtag ctattttgaa agaataattc tccagaagtt aacatctaat atctagtatc
     3781 accaaacagt atcgctgttc tcttttattc atttgaaatg aatataatta tataactaac
     3841 aattgtccaa atagatgaga gagcaaatca tgtgagaaaa ttcagaatac catctgtttc
     3901 atagccgcac agattttgga ctttcacaaa cattgggaac taaatttaga attggcaaaa
     3961 gtctagaaga tgggtatcaa aacagaagac attccaggag ctagcaattt taagaggtgt
     4021 ccctccaaag tgacctgatg gaagtcctga acttggaaat taggttctac tcacttggac
     4081 atccctgcat catggactgt tgctgctccc tgttccatat gctcgcaatc tcagctattt
     4141 ggaagctacc aggaatgctt tctaattatc atttgcaact agaactgtaa tcagaaagaa
     4201 attttgtatt tttgtataac ttgattgtgt gccattttat ataacaggtc ctgttttaca
     4261 aataaatttt gttttactaa aaaaaaaaaa aaaaaaaaaa a
//