LOCUS AJ420812 4301 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens mRNA for choline transporter-like protein 1, splice variant a (CTL1 gene). ACCESSION AJ420812 VERSION AJ420812.1 KEYWORDS alternative splicing; choline transporter-like protein 1; CTL1 gene. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4301) AUTHORS O'Regan S. JOURNAL Submitted (21-NOV-2001) to the INSDC. O'Regan S., Neurobiologie Cellulaire et Moleculaire , C.N.R.S., 1 av de la Terrasse, F-91198 Gif-sur-Yvette, FRANCE. REFERENCE 2 AUTHORS Meunier F.M., Traiffort E., Ruat M., O'Regan S. TITLE Alternate splicing of the CTL1 gene in human JOURNAL Unpublished. COMMENT Related sequence: AJ245620 FEATURES Location/Qualifiers source 1..4301 /db_xref="H-InvDB:HIT000247894" /organism="Homo sapiens" /chromosome="9" /map="9q31.2" /mol_type="mRNA" /cell_line="ICB112" /tissue_type="Ewing's sarcoma" /db_xref="taxon:9606" CDS 43..2016 /gene="CTL1" /product="choline transporter-like protein 1, splice variant a" /function="choline transport" /note="alternate'" /db_xref="GOA:Q8WWI5" /db_xref="H-InvDB:HIT000247894.14" /db_xref="HGNC:HGNC:18798" /db_xref="InterPro:IPR007603" /db_xref="UniProtKB/Swiss-Prot:Q8WWI5" /protein_id="CAD12764.1" /translation="MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGF ICGFSIATGAAARLVSGYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDL INRKIKSVALCVAACPRQELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCP KLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGL CLLSLVLSMILMVIIRYISRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTP EQLQIAEDNLRALLIYAISATVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLL VFQPFWTFFALVLFWVYWIMTLLFLGTTGSPVQNEQGFVEFKISGPLQYMWWYHVVGL IWISEFILACQQMTVAGAVVTYYFTRDKRNLPFTPILASVNRLIRYHLGTVAKGSFII TLVKIPRMILMYIHSQLKGKENACARCVLKSCICCLWCLEKCLNYLNQNAYTATAINS TNFCTSAKDAFVILVENALRVATINTVGDFMLFLGKVLIVCSTGLAGIMLLNYQQDYT VWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCFAIDTKYNDGSPGREFYMDKVLME FVENSRKAMKEAGKGGVADSRELKPMASGASSA" BASE COUNT 1258 a 817 c 871 g 1355 t ORIGIN 1 gctgcgcgca cgcgaccgca tccgggctcc ttcggccccg ccatgggctg ctgcagctcc 61 gcttcctccg ccgcgcagag ctccaaacga gaatggaagc cgctggagga ccgtagctgc 121 acagacatac catggctgct gctcttcatc ctcttctgca ttgggatggg atttatttgt 181 ggcttttcaa tagcaacagg tgcagcagca agactagtgt caggatacga cagctatgga 241 aatatctgtg ggcagaaaaa tacaaagttg gaagcaatac caaacagtgg catggaccac 301 acccagcgga agtatgtatt ctttttggat ccatgcaacc tggacttgat aaaccggaag 361 attaagtctg tagcactgtg tgtagcagcg tgtccaaggc aagaactgaa aactctgagt 421 gatgttcaga agtttgcaga gataaatggt tcagccctat gtagctacaa cctaaagcct 481 tctgaataca ctacatctcc aaaatcttct gttctctgcc ccaaactacc agttccagcg 541 agtgcaccta ttccattctt ccatcgctgt gctcctgtga acatttcctg ctatgccaag 601 tttgcagagg ccctgatcac ctttgtcagt gacaatagtg tcttacacag gctgattagt 661 ggagtaatga ccagcaaaga aattatattg ggactttgct tgttatcact agttctatcc 721 atgattttga tggtgataat caggtatata tcaagagtac ttgtgtggat cttaacgatt 781 ctggtcatac tcggttcact tggaggcaca ggtgtactat ggtggctgta tgcaaagcaa 841 agaaggtctc ccaaagaaac tgttactcct gagcagcttc agatagctga agacaatctt 901 cgggccctcc tcatttatgc catttcagct acagtgttca cagtgatctt attcctgata 961 atgttggtta tgcgcaaacg tgttgctctt accatcgcct tgttccacgt agctggcaag 1021 gtcttcattc acttgccact gctagtcttc caacccttct ggactttctt tgctcttgtc 1081 ttgttttggg tgtactggat catgacactt ctttttcttg gcactaccgg cagtcctgtt 1141 cagaatgagc aaggctttgt ggagttcaaa atttctgggc ctctgcagta catgtggtgg 1201 taccatgtgg tgggcctgat ttggatcagt gaatttattc tagcatgtca gcagatgaca 1261 gtggcaggag ctgtggtaac atactatttt actagggata aaaggaattt gccatttaca 1321 cctattttgg catcagtaaa tcgccttatt cgttaccacc taggtacggt ggcaaaagga 1381 tctttcatta tcacattagt caaaattccg cgaatgatcc ttatgtatat tcacagtcag 1441 ctcaaaggaa aggaaaatgc ttgtgcacga tgtgtgctga aatcttgcat ttgttgcctt 1501 tggtgtcttg aaaagtgcct aaattattta aatcagaatg catacacagc cacagctatc 1561 aacagcacca acttctgcac ctcagcaaag gatgcctttg tcattctggt ggagaatgct 1621 ttgcgagtgg ctaccatcaa cacagtagga gattttatgt tattccttgg caaggtgctg 1681 atagtctgca gcacaggttt agctgggatt atgctgctca actaccagca ggactacaca 1741 gtatgggtgc tgcctctgat catcgtctgc ctctttgctt tcctagtcgc tcattgcttc 1801 ctgtctattt atgaaatggt agtggatgta ttattcttgt gttttgccat tgatacaaaa 1861 tacaatgatg ggagccctgg cagagaattc tatatggata aagtgctgat ggagtttgtg 1921 gaaaacagta ggaaagcaat gaaagaagct ggtaagggag gcgtcgctga ttccagagag 1981 ctaaagccga tggcttcggg agcaagttct gcttgaacct agccgacggt tatggaaacc 2041 cattgacatt ccaaaacaat atatacacac acacataaat cagccaaaat cagagaaaag 2101 gaacagggat ttaatacctt ttttatgctt atttttgtca aacatgtact cctttcatac 2161 gggtggcttt tacaaggcaa cttccgtcat ttaatgtttt caactgtaat tgtcttaatg 2221 gaaatgttaa aattcatatc tgattaacat ttttaataac ttagaggaga ttttaacttt 2281 atttaaaaat aggtaaaatt attgtaccta attatgtcta aagtttattc aggggtaatt 2341 tccctgatgt ctgtataaaa tcaagatctt attttactga tgcataagtc ctagtgggtc 2401 aagactaggc atatgctttc agataaataa ggaattactc caatcagttt tccccaatca 2461 aagaagccat gtcattttac ttttagaaac atacaattgg gcccaatatg ggaattttca 2521 taatagttca tacatttgtc agccaacatt aaaaggtaac caactcctca ggtatttgta 2581 gtttacccta acgcttcttt aaaagaaagt aggtaaaaaa agaaaagggt agataatctt 2641 tcgtatgcaa acttttccct tatattttgt ctttctttcc tttttgactt tagtagcatc 2701 ctccacacat ttgtgtgcct gatttgaaag gaagctgggg cacccagcga gtttagcctt 2761 taagtttctg tgtattgatt tgcagattaa gtaatgctga gaggaataaa gaagggacag 2821 aaacatggaa cataaagcat tgaaaattcc ggtgcttggg cttcggcttc agagtaacgt 2881 cagtggctta gggttaaacg gccattttat tcaaatgctt gctatacaat ctgaaaacac 2941 actggcaggt gctcctctcc ttggcaattc attgagtatc cagagttcta cgatgtttaa 3001 ctgaagaatt ggctaatgtt ttgatcctcc agtgtgactg ttgtttttgt ttgggggtgg 3061 gtttggggtt ttttgctttt ttattcctga agcttaccag atatgaatgg ctaatactcc 3121 attgttctgc ttgttgtaat ggtgaatgct ttaagaaaaa aaagtgtaat ttgctaagaa 3181 taattcatga tctgtttatg cgataactcc tttttgttac aattttttta aaaaaagcta 3241 tttttgttaa tgtaaagtaa atatttcaga gcaaattttt taaacttatt gcactaaata 3301 caggctctgt acaaaaaaaa aaaaaaaaaa gcctcagcat tttatcattc catggaagga 3361 gaatcttttg aaagaaagca ttgcctccta ccagaactag acagtgaatt agatcggtat 3421 tatggaaatg catacaagta atgtcactag ggcttaataa gcagccgttt gctaatgtgc 3481 ttcctttcaa agggttggac ctttaaattg ctgcaaaagg taaattgtat ttttttttaa 3541 gtattggtgt tctttactct agctaggcta aaatttgcta aatgccttgg tttcttttaa 3601 aagttcatgt aatatttctg atttttcaga atatttgcaa taagagtctg gattttaaaa 3661 aacacatgca tacacacaat taagagctca tgtcttagca agatctggga aaccaacatt 3721 gcgagagtag ctattttgaa agaataattc tccagaagtt aacatctaat atctagtatc 3781 accaaacagt atcgctgttc tcttttattc atttgaaatg aatataatta tataactaac 3841 aattgtccaa atagatgaga gagcaaatca tgtgagaaaa ttcagaatac catctgtttc 3901 atagccgcac agattttgga ctttcacaaa cattgggaac taaatttaga attggcaaaa 3961 gtctagaaga tgggtatcaa aacagaagac attccaggag ctagcaattt taagaggtgt 4021 ccctccaaag tgacctgatg gaagtcctga acttggaaat taggttctac tcacttggac 4081 atccctgcat catggactgt tgctgctccc tgttccatat gctcgcaatc tcagctattt 4141 ggaagctacc aggaatgctt tctaattatc atttgcaact agaactgtaa tcagaaagaa 4201 attttgtatt tttgtataac ttgattgtgt gccattttat ataacaggtc ctgttttaca 4261 aataaatttt gttttactaa aaaaaaaaaa aaaaaaaaaa a //