LOCUS AJ409089 1557 bp DNA linear HUM 11-MAY-2001 DEFINITION Homo sapiens HCC-1 gene. ACCESSION AJ409089 VERSION AJ409089.1 KEYWORDS HCC-1 gene; hepatocellular carcinoma; nuclear protein. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1557) AUTHORS Choong M.L. JOURNAL Submitted (21-FEB-2001) to the INSDC. Choong M.L., National University of Singapore, Bioprocessing Technology Centre, MD 11 Level 5, 10 Medical Drive, 117597, SINGAPORE. REFERENCE 2 AUTHORS Choong M.L., Tan L.K., Lo S.L., Ren E.C., Ou K.L., Ong S.E., Liang R.C., Seow T.K., Chung M. TITLE An integrated approach in the discovery and characterization of a novel nuclear protein over-expressed in liver and pancreatic tumors JOURNAL FEBS Lett. 496(2-3), 109-116(2001). PUBMED 11356193 FEATURES Location/Qualifiers source 1..1557 /organism="Homo sapiens" /chromosome="7" /map="7q22" /mol_type="genomic DNA" /cell_line="HCC-M" /cell_type="hepatocellular carcinoma" /tissue_type="liver" /db_xref="taxon:9606" regulatory 1..687 /gene="HCC-1" /experiment="experimental evidence, no additional details recorded" /regulatory_class="promoter" misc_feature 305..594 /function="tightens and regulates translation of HCC-1 gene" /note="non-functional upstream open reading frame" repeat_region 446..453 /gene="HCC-1" /rpt_type=DIRECT mRNA 661..1557 /gene="HCC-1" CDS 688..1320 /gene="HCC-1" /product="HCC-1 protein" /db_xref="GOA:P82979" /db_xref="HGNC:HGNC:24432" /db_xref="InterPro:IPR003034" /db_xref="InterPro:IPR036361" /db_xref="PDB:2DO1" /db_xref="UniProtKB/Swiss-Prot:P82979" /protein_id="CAC37950.1" /translation="MATETVELHKLKLAELKQECLARGLETKGIKQDLIHRLQAYLEE HAEEEANEEDVLGDETEEEETKPIELPVKEEEPPEKTVDVAAEKKVVKITSEIPQTER MQKRAERFNVPVSLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLN VSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRKRAERFGIA" 3'UTR 1321..1557 /gene="HCC-1" /experiment="experimental evidence, no additional details recorded" repeat_region 1358..1365 /gene="HCC-1" /rpt_type=DIRECT polyA_site 1542 /gene="HCC-1" /experiment="experimental evidence, no additional details recorded" BASE COUNT 413 a 365 c 402 g 377 t ORIGIN 1 caggggcagc agtgattatc tgaactcgga tctttaaaat tgtggtagct ctaaagctga 61 tgatgtctgg ttaggaagtg gctcttgccc gccccagccc caccgccagt tccttaagcc 121 cgccccatgc ccctcccagc ttcctcctca tgttcatcgg ttttttcagg gctcccttca 181 acgctcccct ctcagtattt aggtcaccac tccctcggcg cccctttcgc ctcccaccat 241 ttttcctcag caacccttac agtctttgca gctcctacct gccagctcag atccccgtcc 301 ggctatgggc gcggcgccgg ctaccacacc tgaagtctcc aggaagtaac gcctctcctt 361 ctgccccttt cctgttggag gaacagaatc agcgctgcca ccacccattg gttggtggtc 421 tgtaatgcag aagcacagtt ggttgccatt tctgtcgttc gcaagataca gtgcccgccc 481 ctctcccagt tccacctttt gaaagaggtg gggcaagctg cctagagaag tgagagcgac 541 gtcagctatt gaccaatggg aagagctgat ggtatggcgt gggagcaaga gtgacaacga 601 ttggtcagcc ttgcatctct acgcctaagg cgggaactcc tggaggcgga ggccgcgggt 661 ggggggagtg gagtgagggg taacaagatg gcgaccgaga cggtggagct ccataagcta 721 aagcttgccg aactaaagca agaatgtctt gctcgtggtt tggagaccaa gggaataaag 781 caagatctta tccacagact ccaggcatat cttgaagaac atgctgaaga ggaggcaaat 841 gaagaagatg tactgggaga tgaaacagag gaagaagaaa caaagcccat tgagctccct 901 gtcaaagagg aagaaccccc tgaaaaaact gttgatgtgg cagcagagaa gaaagtggtg 961 aaaattacat ctgaaatacc acagactgag agaatgcaga agagggctga acgattcaat 1021 gtacctgtga gcttggagag taagaaagct gctcgggcag ctaggtttgg gatttcttca 1081 gttccaacaa aaggtctgtc atctgataac aaacctatgg ttaacttgga taagctgaag 1141 gaaagagctc aaagatttgg tttgaatgtc tcttcaatct ccagaaagtc tgaagatgat 1201 gagaaactga aaaagaggaa ggagcgattt gggattgtca caagttcagc tggaactgga 1261 accacagagg atacagaggc aaagaagagg aaaagagcag agcgctttgg gattgcctga 1321 tgaaaagttc ctgatacttt ctgttctcca gtgttttcca tttctctcct tcttcttggt 1381 cacatatatg cctaaatgca cagtcatgtg cctacgtcct gcctcgcaat gagggagcat 1441 gtaccccagg tacatccatg aactgcggca gcagtttgac ttattgctgt ttcagcttta 1501 aggttgttgt gtttttgttt ttgattatgt tgcttgttaa taaaaaaaaa tagaaaa //