LOCUS AJ390068 1409 bp DNA linear PLN 29-MAR-2001
DEFINITION Cannabis sativa chloroplast partial rbcL gene.
ACCESSION AJ390068
VERSION AJ390068.1
KEYWORDS rbcL gene; ribulose bisphosphate carboxylase/oxygenase.
SOURCE chloroplast Cannabis sativa (hemp)
ORGANISM Cannabis sativa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis.
REFERENCE 1 (bases 1 to 1409)
AUTHORS Richardson J.E.
JOURNAL Submitted (12-AUG-1999) to the INSDC. Richardson J.E., Herbarium,
Royal Botanic Garden, Edinburgh, 20A Inverleith Row, Edinburgh, EH3
5LR, UNITED KINGDOM.
REFERENCE 3
AUTHORS Richardson J.E., Fay M.F., Cronk Q.C.B., Bowman D., Chase M.W.
TITLE A phylogenetic analysis of Rhamnaceae using rbcL and trnL-F plastid
DNA sequences
JOURNAL Am. J. Bot. 87(9), 1309-1324(2000).
PUBMED 10991902
FEATURES Location/Qualifiers
source 1..1409
/organism="Cannabis sativa"
/organelle="plastid:chloroplast"
/mol_type="genomic DNA"
/note="collected from in cultivation"
/db_xref="taxon:3483"
CDS <1..1409
/codon_start=3
/transl_table=11
/gene="rbcL"
/product="ribulose bisphosphate carboxylase oxygenase"
/function="photosynthetic enzyme"
/db_xref="GOA:Q9G127"
/db_xref="InterPro:IPR000685"
/db_xref="InterPro:IPR017443"
/db_xref="InterPro:IPR020878"
/db_xref="InterPro:IPR020888"
/db_xref="InterPro:IPR033966"
/db_xref="InterPro:IPR036376"
/db_xref="InterPro:IPR036422"
/db_xref="UniProtKB/TrEMBL:Q9G127"
/protein_id="CAC06053.1"
/translation="KASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPE
EAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQFIRYVAYPLDLFE
EGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTSYTKTFQGPPHGIQVERDKLNKYGR
PLLGCTIKPKLGLSAKNYGRAXYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI
YKSQSETGEIKGHYLNATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHY
CRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMXGGDHXXSGXVVGKXEGEREI
XLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVXPVASGGIHVWHMPALTEIFGDDSV
LQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREACKWSPELAA
ACEVWKEIKFEFEAMDTL"
BASE COUNT 396 a 244 c 336 g 422 t
ORIGIN
1 ctaaagcaag tgttggattc aaagctggtg ttaaagatta taaattgact tattacactc
61 cggaatatca aaccaaagat actgatatct tggcagcatt tcgagtaact cctcaacctg
121 gagttccccc tgaagaagca ggggctgcgg tagctgctga atcttctact ggtacatgga
181 caactgtatg gactgatggg cttaccagcc ttgatcgcta caaaggtcga tgctaccaca
241 tcgagcccgt tgctggagaa gaaaatcaat ttattcgtta tgtagcttat ccyttagacc
301 tttttgaaga aggttctgtt actaacatgt ttacttccat tgtgggtaat gtatttgggt
361 tcaaggccct gcgcgctcta cgtctggaag atttgagaat ccctacttct tatactaaaa
421 ctttccaagg accgcctcat gggatccaag ttgagagaga taaattgaac aagtatggtc
481 gcccactatt gggatgtact attaaaccta aattggggtt atccgctaag aattacggta
541 gagcangtta tgaatgtctt cgcggtggac ttgattttac caaagatgat gagaacgtaa
601 attcccaacc atttatgcgt tggagagacc gtttcttatt ttgtgcagaa gcaatttata
661 aatcacagtc tgaaacaggg gaaatcaaag gacattactt gaatgctact gcaggtacat
721 gtgaagaaat gatgaaaagg gctgtatttg ccagagaatt gggagttcct atcgtaatgc
781 atgattactt aacaggagga ttcactgcaa atactagtct ggctcattat tgtcgagata
841 atggtctact tcttcacatc caccgtgcaa tgcatgcggt tattgataga caaaagaatc
901 atggtataca cttccgtgta ctagctaaag cgttacgtat gtytggtgga gatcatatnn
961 attcaggtay tgtrgtaggt aaayttgaag gggaaagaga aattayttta ggytttgttg
1021 atttactacg tgatgatttt attgaaaaag atcgaagccg tggtatttat ttcactcaag
1081 attgggtctc tctaccaggt gttmtgcctg tggcttcagg gggtattcac gtttggcata
1141 tgcctgcttt gaccgagatc tttggagatg attccgtact acaatttggt ggaggaactt
1201 taggacatcc ttggggaaat gcacccggtg ctgtcgctaa tcgagtagct ctagaagcat
1261 gtgtacaagc tcgtaatgag ggacgtgatc ttgctcgtga gggtaatgaa attattcgtg
1321 aggcttgtaa atggagtcct gaactagctg ctgcttgtga agtttggaag gaaatcaaat
1381 ttgaatttga agcaatggat acgttgtaa
//