LOCUS       AJ310893                 340 bp    mRNA    linear   HUM 07-OCT-2008
DEFINITION  Homo sapiens partial mRNA for voltage gated sodium channel Nav1.5
            (SCN5A gene), D1 S3 exon-skipped splice variant, biopsy sample 8.
ACCESSION   AJ310893
VERSION     AJ310893.1
KEYWORDS    alternative splicing; Nav1.5; Scn5a gene; voltage gated sodium
            channel.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   Diss J.K.J.
  JOURNAL   Submitted (03-APR-2001) to the INSDC. Diss J.K.J., Biology,
            Imperial College of Science, Technology and Medicine, Imperial
            College Road, South Kensington, London SW7 2AZ, UNITED KINGDOM.
REFERENCE   2
  AUTHORS   Diss J.K.J., Fraser S.P., Coombes R.C., Djamgoz M.B.A.
  TITLE     Upregulation of voltage-gated Na+ channel expression and metastatic
            potential in human breast cancer: Correlative studies on cell lines
            and biopsy tissues
  JOURNAL   Unpublished.
FEATURES             Location/Qualifiers
     source          1..340
                     /db_xref="H-InvDB:HIT000247079"
                     /organism="Homo sapiens"
                     /isolate="biopsy sample 8"
                     /mol_type="mRNA"
                     /country="United Kingdom"
                     /tissue_type="breast"
                     /db_xref="taxon:9606"
     CDS             <1..>340
                     /codon_start=3
                     /gene="SCN5A"
                     /product="Nav1.5"
                     /function="voltage-gated sodium channel"
                     /note="alternative splicing, D1 S3 exon-skipped splice
                     variant"
                     /note="alternative name scn5a/h1"
                     /db_xref="GOA:Q8WWN6"
                     /db_xref="H-InvDB:HIT000247079.13"
                     /db_xref="InterPro:IPR005821"
                     /db_xref="UniProtKB/TrEMBL:Q8WWN6"
                     /protein_id="CAC84525.1"
                     /translation="MAQHDPPPWTKYVEYVSENIKLGNLSALRTFRVLRALKTISVIP
                     GLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNGTNG
                     SVEADGLVWES"
BASE COUNT           78 a           97 c           86 g           79 t
ORIGIN      
        1 tcatggccca gcacgaccct ccaccctgga ccaagtatgt cgagtatgta tcagaaaata
       61 taaaactagg caatttgtcg gctcttcgaa ctttcagagt cctgagagct ctaaaaacta
      121 tttcagttat cccagggctg aagaccatcg tgggggccct gatccagtct gtgaagaagc
      181 tggctgatgt gatggtcctc acagtcttct gcctcagcgt ctttgccctc atcggcctgc
      241 agctcttcat gggcaaccta aggcacaagt gcgtgcgcaa cttcacagcg ctcaacggca
      301 ccaacggctc cgtggaggcc gacggcttgg tctgggaatc
//