LOCUS AJ310550 3410 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for SMC5 protein.
ACCESSION AJ310550
VERSION AJ310550.1
KEYWORDS SMC5 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3410)
AUTHORS Lehmann A.R.
JOURNAL Submitted (21-FEB-2001) to the INSDC. Lehmann A.R., MRC Cell
Mutation Unit, University of Sussex, Falmer, Brighton, E. Sussex
BN7 1EW, UNITED KINGDOM.
REFERENCE 2
AUTHORS Taylor E.M., Moghraby J.S., Lees J.H., Smit B., Moens P.B.,
Lehmann A.R.
TITLE Characterisation of a novel human SMC heterodimer homologous to the
Schizosaccharomyces pombe Rad18/Spr18 complex
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..3410
/db_xref="H-InvDB:HIT000247059"
/organism="Homo sapiens"
/mol_type="mRNA"
/clone="lambda gt11"
/tissue_lib="Testis and thymus"
/db_xref="taxon:9606"
CDS 1..3306
/gene="SMC5"
/product="SMC5 protein"
/function="putative DNA repair protein"
/db_xref="GOA:Q8IY18"
/db_xref="H-InvDB:HIT000247059.12"
/db_xref="HGNC:HGNC:20465"
/db_xref="InterPro:IPR003395"
/db_xref="InterPro:IPR027131"
/db_xref="InterPro:IPR027417"
/db_xref="UniProtKB/Swiss-Prot:Q8IY18"
/protein_id="CAC39247.1"
/translation="MATPSKKTSTPSPQPSKRALPRDPSSEVPSKRKNSAPQLPLLQS
SGPFVEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPA
FMGRADKVGFFVKRGCSRGMVEIELFRASGNLVITREIDVAKNQSFWFINKKSTTQKI
VEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCELKNL
REKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYE
NVRQEYEEVKLVRDRVKEEVRKLKEGQIPITRRIEEMENERHNLEARIKEKATDIKEA
SQKCKQKQDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTEN
CENLQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMN
QKEDKLRQRFRDTYDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSND
LRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADKAPSRSLNELKQYGFFSYL
RELFDAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETRLKQIYTAEEKYVVKTS
FYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALRETSKH
LEHKDNELRQKKKELLERKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIK
EINVQKAKLVTELTNLIKICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRLT
EQHFIELDENRQRLLQKCKELMKRARQVCNLGAEQTLPQEYQTQVPTIPNGHNSSLPM
VFQDLPNTLDEIDALLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELKGKKVEL
DQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIR
IRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINE
RRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNTWNLKAF
QRRRRRITFTQPS"
BASE COUNT 1277 a 577 c 725 g 831 t
ORIGIN
1 atggcgactc cgagcaagaa gacgtcaact ccaagccccc agccttccaa gagagctctc
61 ccgagagacc cttcgtcgga ggtcccgagc aagaggaaga attcggcccc gcagctgccg
121 ctgttgcagt cgtccgggcc tttcgtggaa ggctctatcg tccgcatctc gatggagaac
181 ttcctaacat atgatatttg tgaagtatct cctggacccc acttgaatat gatcgttgga
241 gccaatggaa cagggaagtc gagcattgtg tgtgccattt gccttggttt agctggaaaa
301 cctgctttca tgggacgagc agataaggtt gggttttttg tgaagagagg atgttctaga
361 ggcatggttg aaattgaatt gttcagggct tctggaaatc ttgtaatcac ccgtgagatt
421 gatgtggcaa aaaatcagtc cttttggttc atcaacaaaa aatctacaac ccagaaaata
481 gtggaagaga aagttgcagc cttaaatatt caagtgggga atctttgcca gtttctccct
541 caggacaaag ttggagaatt tgctaaactc agcaaaattg aactcctcga agccactgaa
601 aagtcaattg gtcccccaga aatgcacaaa tatcactgtg aactcaaaaa cttaagggag
661 aaagaaaaac agctcgagac ctcatgcaaa gagaaaactg agtatctaca gaaaatggtt
721 cagaggaatg aaagatataa acaagatgtg gagaggttct atgaacggaa gcgacattta
781 gatttaattg agatgcttga agcaaaaagg ccatgggtgg aatatgaaaa tgttcgtcag
841 gaatatgaag aagtaaaact agttcgtgac cgagtgaagg aagaggtcag aaaacttaaa
901 gaagggcaga ttcctataac acgtcgaatt gaagaaatgg aaaacgagcg tcacaatttg
961 gaggctcgaa tcaaagaaaa ggcaacagat attaaggagg catctcaaaa atgcaaacag
1021 aagcaagatg ttatagaaag gaaagataaa catattgagg aacttcagca ggctttaata
1081 gtaaaacaaa atgaagagct tgaccgacag aggagaatag gtaatacccg caaaatgata
1141 gaggatttgc aaaatgaact aaagaccacg gaaaactgcg agaatcttca gccccagatt
1201 gatgccatta caaatgatct gagacggatt caggatgaaa aggcattatg tgaaggcgaa
1261 ataattgata agcgaagaga gagggaaact ctagagaagg agaaaaagag tgtggacgat
1321 catattgtac gttttgacaa tcttatgaat cagaaggaag ataagctaag acagagattc
1381 cgtgacacgt atgatgctgt tttatggcta agaaataaca gagacaaatt taaacaaaga
1441 gtctgtgagc ccataatgct cacgatcaat atgaaagata ataaaaatgc caaatatatt
1501 gaaaatcata ttccatcaaa tgacttaaga gcctttgtat ttgaaagtca agaagatatg
1561 gaggttttcc tcaaagaggt tcgtgacaat aaaaaattaa gagtaaatgc tgttattgct
1621 cccaagagtt catatgcaga caaagcacct tcaagatctt tgaatgaact taaacaatac
1681 ggatttttct cttatttgag agaattattt gatgcacctg atcctgtaat gagttacctt
1741 tgctgtcagt atcatattca tgaagttcct gtaggaactg aaaagaccag agaaagaatt
1801 gaacgggtaa tacaagaaac ccgattaaaa cagatttata cagcagaaga aaagtatgtg
1861 gtgaaaactt ctttttattc aaacaaagtt atttctagta acacatctct aaaagtagcg
1921 cagtttctca ctgtcactgt ggacctagag cagagaagac acttagaaga acagctaaag
1981 gaaattcata gaaaattgca agcagtggat tcagggttga ttgccttacg tgaaacaagc
2041 aaacatctgg agcacaaaga caatgaactt agacaaaaga agaaggagct tcttgagaga
2101 aaaaccaaga aaagacaact ggaacaaaaa atcagttcca aactaggaag tttaaagctg
2161 atggaacagg atacttgcaa tcttgaagag gaagagcgaa aagcaagtac caaaatcaaa
2221 gaaataaatg ttcaaaaagc gaaacttgtt accgaattaa caaacctaat aaagatttgt
2281 acttctttgc atatacaaaa agtagattta attctccaaa atactacagt gatctctgag
2341 aagaacaaat tagaatcaga ttatatggcc gcatcttcac aactccgtct tacagagcaa
2401 catttcattg aattggatga aaatagacag agattattgc agaaatgcaa ggaacttatg
2461 aaaagagcta ggcaagtatg taacctgggt gcagagcaga ctcttcctca agaataccag
2521 acacaagtac ccaccattcc aaatggacac aactcctcac tccccatggt tttccaagac
2581 cttccaaaca cattggatga aattgatgct ttattaactg aagaaagatc aagagcttcc
2641 tgcttcacgg gactgaatcc tacaattgtt caggaatata caaaaagaga agaagaaata
2701 gaacagttaa ctgaggaact aaagggaaag aaagttgaac tagatcaata cagggaaaac
2761 atttcacagg taaaagaaag gtggcttaat cctttaaaag agctggtaga aaaaattaat
2821 gaaaaattca gcaatttttt tagttccatg cagtgtgctg gtgaagttga tctccataca
2881 gaaaatgagg aagattatga taaatatgga attcgaatta gagtcaaatt tcgaagtagt
2941 actcaactgc atgaattaac tcctcatcat caaagtggag gtgaaagaag tgtttctacc
3001 atgttatact tgatggcact tcaggagcta aatagatgtc cattcagagt agttgatgaa
3061 atcaatcagg gaatggaccc aatcaatgaa cggagagtgt ttgaaatggt tgtaaatact
3121 gcctgtaaag aaaatacatc tcaatacttt ttcataacac caaagctcct gcaaaatctt
3181 ccttattctg aaaagatgac agttttgttt gtctacaatg gccctcatat gctggaacca
3241 aacacatgga atttaaaggc tttccaaagg cggcggcgcc gtattacatt cactcaacct
3301 tcttaataaa agtaaagaga gggaacttgg gaattttttt tgttaaattc tgtttataag
3361 tatggctcaa ctgaataaaa ggagattcac taaaaaaaaa aaaaaaaaaa
//