LOCUS AJ304852 2840 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for sodium/calcium exchanger SCL8A3, alternative
splice form A (SCL8A3 gene).
ACCESSION AJ304852
VERSION AJ304852.1
KEYWORDS alternative splicing; form A; SCL8A3 gene; SCL8A3 protein;
Sodium/calcium exchanger.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2840)
AUTHORS Bortoluzzi S.
JOURNAL Submitted (22-DEC-2000) to the INSDC. Bortoluzzi S., Department of
Biology and Department of Biological Chemistry, University of
Padova, via G. Colombo 3, 35131 PADOVA, ITALY.
REFERENCE 2
AUTHORS Gabellini N.
TITLE Characterization of the human SCL8A3 gene for solute carrier family
8, member 3 (sodium/calcium exchanger)
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..2840
/db_xref="H-InvDB:HIT000246898"
/organism="Homo sapiens"
/chromosome="14"
/map="14q24.1"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 63..2840
/gene="SCL8A3"
/product="sodium/calcium exchanger SCL8A3"
/function="sodium/calcium exchanger"
/note="alternative splice form A, (exons 2, 3, 5, 9, 10,
11, 12)"
/db_xref="GOA:P57103"
/db_xref="H-InvDB:HIT000246898.13"
/db_xref="HGNC:HGNC:11070"
/db_xref="InterPro:IPR003644"
/db_xref="InterPro:IPR004836"
/db_xref="InterPro:IPR004837"
/db_xref="InterPro:IPR032452"
/db_xref="InterPro:IPR038081"
/db_xref="UniProtKB/Swiss-Prot:P57103"
/protein_id="CAC40984.1"
/translation="MAWLRLQPLTSAFLHFGLVTFVLFLNGLRAEAGGSGDVPSTGQN
NESCSGSSDCKEGVILPIWYPENPSLGDKIARVIVYFVALIYMFLGVSIIADRFMASI
EVITSQEREVTIKKPNGETSTTTIRVWNETVSNLTLMALGSSAPEILLSLIEVCGHGF
IAGDLGPSTIVGSAAFNMFIIIGICVYVIPDGETRKIKHLRVFFITAAWSIFAYIWLY
MILAVFSPGVVQVWEGLLTLFFFPVCVLLAWVADKRLLFYKYMHKKYRTDKHRGIIIE
TEGDHPKGIEMDGKMMNSHFLDGNLVPLEGKEVDESRREMIRILKDLKQKHPEKDLDQ
LVEMANYYALSHQQKSRAFYRIQATRMMTGAGNILKKHAAEQAKKASSMSEVHTDEPE
DFISKVFFDPCSYQCLENCGAVLLTVVRKGGDMSKTMYVDYKTEDGSANAGADYEFTE
GTVVLKPGETQKEFSVGIIDDDIFEEDEHFFVRLSNVRIEEEQPEEGMPPAIFNSLPL
PRAVLASPCVATVTILDDDHAGIFTFECDTIHVSESIGVMEVKVLRTSGARGTVIVPF
RTVEGTAKGGGEDFEDTYGELEFKNDETVKTIHIKVIDDEAYEKNKNYFIEMMGPRMV
DMSFQKALLLSPDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVIIEESYEFKTTVDKLI
KKTNLALVVGTHSWRDQFMEAITVSAAGDEDEDESGEERLPSCFDYVMHFLTVFWKVL
FACVPPTEYCHGWACFAVSILIIGMLTAIIGDLASHFGCTIGLKDSVTAVVFVAFGTS
VPDTFASKAAALQDVYADASIGNVTGSNAVNVFLGIGLAWSVAAIYWALQGQEFHVSA
GTLAFSVTLFTIFAFVCISVLLYRRRPHLGGELGGPRGCKLATTWLFVSLWLLYILFA
TLEAYCYIKGF"
BASE COUNT 668 a 700 c 775 g 697 t
ORIGIN
1 gtctctggcc tatcaggagg acaactggtg ctgcaataga agccagtggc taagtctcgt
61 gtatggcgtg gttaaggttg cagcctctca cctctgcctt cctccatttt gggctggtta
121 cctttgtgct cttcctgaat ggtcttcgag cagaggctgg tggctcaggg gacgtgccaa
181 gcacagggca gaacaatgag tcctgttcag ggtcatcgga ctgcaaggag ggtgtcatcc
241 tgccaatctg gtacccggag aacccttccc ttggggacaa gattgccagg gtcattgtct
301 attttgtggc cctgatatac atgttccttg gggtgtccat cattgctgac cgcttcatgg
361 catctattga agtcatcacc tctcaagaga gggaggtgac aattaagaaa cccaatggag
421 aaaccagcac aaccactatt cgggtctgga atgaaactgt ctccaacctg acccttatgg
481 ccctgggttc ctctgctcct gagatactcc tctctttaat tgaggtgtgt ggtcatgggt
541 tcattgctgg tgatctggga ccttctacca ttgtagggag tgcagccttc aacatgttca
601 tcatcattgg catctgtgtc tacgtgatcc cagacggaga gactcgcaag atcaagcatc
661 tacgagtctt cttcatcacc gctgcttgga gtatctttgc ctacatctgg ctctatatga
721 ttctggcagt cttctcccct ggtgtggtcc aggtttggga aggcctcctc actctcttct
781 tctttccagt gtgtgtcctt ctggcctggg tggcagataa acgactgctc ttctacaaat
841 acatgcacaa aaagtaccgc acagacaaac accgaggaat tatcatagag acagagggtg
901 accaccctaa gggcattgag atggatggga aaatgatgaa ttcccatttt ctagatggga
961 acctggtgcc cctggaaggg aaggaagtgg atgagtcccg cagagagatg atccggattc
1021 tcaaggatct gaagcaaaaa cacccagaga aggacttaga tcagctggtg gagatggcca
1081 attactatgc tctttcccac caacagaaga gccgtgcctt ctaccgtatc caagccactc
1141 gtatgatgac tggtgcaggc aatatcctga agaaacatgc agcagaacaa gccaagaagg
1201 cctccagcat gagcgaggtg cacaccgatg agcctgagga ctttatttcc aaggtcttct
1261 ttgacccatg ttcttaccag tgcctggaga actgtggggc tgtactcctg acagtggtga
1321 ggaaaggggg agacatgtca aagaccatgt atgtggacta caaaacagag gatggttctg
1381 ccaatgcagg ggctgactat gagttcacag agggcacggt ggttctgaag ccaggagaga
1441 cccagaagga gttctccgtg ggcataattg atgacgacat ttttgaggag gatgaacact
1501 tctttgtaag gttgagcaat gtccgcatag aggaggagca gccagaggag gggatgcctc
1561 cagcaatatt caacagtctt cccttgcctc gggctgtcct agcctcccct tgtgtggcca
1621 cagttaccat cttggatgat gaccatgcag gcatcttcac ttttgaatgt gatactattc
1681 atgtcagtga gagtattggt gttatggagg tcaaggttct gcggacatca ggtgcccggg
1741 gtacagtcat cgtccccttt aggacagtag aagggacagc caagggtggc ggtgaggact
1801 ttgaagacac atatggggag ttggaattca agaatgatga aactgtcaaa acaattcaca
1861 tcaaggtaat tgatgatgag gcatatgaga aaaacaagaa ttacttcatt gagatgatgg
1921 gcccccgcat ggtggatatg agttttcaga aagcgctcct gttatctcca gacaggaagc
1981 tgactatgga agaagaggag gccaagagga tagcagagat gggaaagcca gtattgggtg
2041 aacaccccaa actagaagtc atcattgaag agtcctatga gttcaagact acggtggaca
2101 aactgatcaa gaagacaaac ctggccttgg ttgtggggac ccattcctgg agggaccagt
2161 tcatggaggc catcaccgtc agtgcagcag gggatgagga tgaggatgaa tccggggagg
2221 agaggctgcc ctcctgcttt gactacgtca tgcacttcct gactgtcttc tggaaggtgc
2281 tgtttgcctg tgtgcccccc acagagtact gccacggctg ggcctgcttc gccgtctcca
2341 tcctcatcat tggcatgctc accgccatca ttggggacct ggcctcgcac ttcggctgca
2401 ccattggtct caaagattca gtcacagctg ttgttttcgt ggcatttggc acctctgtcc
2461 cagatacgtt tgccagcaaa gctgctgccc tccaggatgt atatgcagac gcctccattg
2521 gcaacgtgac gggcagcaac gccgtcaatg tcttcctggg catcggcctg gcctggtccg
2581 tggccgccat ctactgggct ctgcagggac aggagttcca cgtgtcggcc ggcacactgg
2641 ccttctccgt caccctcttc accatctttg catttgtctg catcagcgtg ctcttgtacc
2701 gaaggcggcc gcacctggga ggggagcttg gtggcccccg tggctgcaag ctcgccacaa
2761 catggctctt tgtgagcctg tggctcctct acatactctt tgccacacta gaggcctatt
2821 gctacatcaa ggggttctaa
//