LOCUS AJ292466 7939 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA for WDR9 protein (WDR9 gene), form B.
ACCESSION AJ292466
VERSION AJ292466.1
KEYWORDS WDR9 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7939)
AUTHORS Antonarakis S.
JOURNAL Submitted (17-JUL-2000) to the INSDC. Antonarakis S., Division of
Medical Genetics, Centre Medical Universitaire, 1 rue
Michel-Servet, 1211 Geneva 4, SWITZERLAND.
REFERENCE 2
AUTHORS Scott H.S., Barras C., Mittaz L., Michaud J., Guidi S.,
Scamuffa N., Antonarakis S.
TITLE Isolation and characterization of a new chromosome 21 gene, WDR9,
with different alternatively spliced transcripts and different
protein forms
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..7939
/db_xref="H-InvDB:HIT000246588"
/organism="Homo sapiens"
/chromosome="chromosome 21"
/map="21q22.2"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 80..6889
/gene="WDR9"
/product="WDR9 protein, form B"
/db_xref="GOA:Q9NSI6"
/db_xref="H-InvDB:HIT000246588.13"
/db_xref="HGNC:HGNC:12760"
/db_xref="InterPro:IPR001487"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR017986"
/db_xref="InterPro:IPR018359"
/db_xref="InterPro:IPR019775"
/db_xref="InterPro:IPR036322"
/db_xref="InterPro:IPR036427"
/db_xref="PDB:3Q2E"
/db_xref="UniProtKB/Swiss-Prot:Q9NSI6"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAC44372.1"
/translation="MAEPSSARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQ
YQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQICQRIGPMLDKEIPPSISRVTS
LLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRGKQLTG
CSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG
RLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSL
QFSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSV
GGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTA
RIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVL
KVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYF
NMIEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRP
LIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKYQRLVPGRENSADEHLIPQLG
YVATSDGEVIEQIISLQTNDNDERSPESSILDGMIRQLQQQQDQRMGADQDTIPRGLS
NGEETPRRGFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPRSQIATERDLQAWKRR
VVVPEVPLGIFRKLEDFRLEKGEEERNLYIIGRKRKTLQLSHKSDSVVLVSQSRQRTC
RRKYPNYGRRNRSWRELSSGNESSSSVRHETSCDQSEGSGSSEEDEWRSDRKSESYSE
SSSDSSSRYSDWTADAGINLQPPLRTSCRRRITRFCSSSEDEISTENLSPPKRRRKRK
KENKPKKENLRRMTPAELANMEHLYEFHPPVWITDTTLRKSPFVPQMGDEVIYFRQGH
EAYIEAVRRNNIYELNPNKEPWRKMDLRDQELVKIVGIRYEVGPPTLCCLKLAFIDPA
TGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDAWWFGTVLS
QEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPPEELGASISVTTDELE
KLLYKPQAGEWGQKSRDEECDRIISGIDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYP
TDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFIK
NQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNYVESNWKK
QCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEF
CKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQKFNEKLRRSQ
RFKQRQNCKGDSQPNKSIRNLKPKRLKSQTKIIPELVGSPTQSTSSRTAYLGTHKTSA
GISSGVTSGDSSDSAEPSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEESK
ESSRARESSSRSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATRKRVYLSDSDNN
SLETGEILKARAGNNRKVLRKCAAVAANKIKLMSDVEENSSSESVCSGRKLPHRNASA
VARKKLLHNSEDEQSLKSEIEEEELKDENQPLPVSSSHTAQSNVDESENRDSESESDL
RVARKNWHANGYKSHTPAPSKTKFLKIESSEEDSKSHDSDHACNRTAGPSTSVQKLKA
ESISEEADSEPGRSGGRKYNTFHKNASFFKKTKILSDSEDSESEEQDREDGKCHKMEM
NPISGNLNCDPIAMSQCSSDHGCETDLDSDDDKIEKPNNFMKDSASQDNGLSRKISRK
RVCSSDSDSSLQVVKKSSKARTGLLRITRRCAATAANKIKLMSDVEDVSLENVHTRSK
NGRKKPLHLACTTAKKKLSDCEGSVHCEVPSEQYACEGKPPDPDSEGSTKVLSQALNG
DSDSEDMLNSEHKHRHTNIHKIDAPSKRKSSSVTSSGEDSKSHIPGSETDRTFSSEST
LAQKATAENNFEVELNYGLRRWNGRRLRTYGKAPFSKTKVIHDSQETAEKEVKRKRSH
PELENVKISETTGNSKFRPDTSSKSSDLGSVTESDIDCTDNTKTKRRKTKGKAKVVRK
GKTFTANISKTVRRQRQSKRPRLSVDDNDWEDLDYAKSKRVLRRSKIKTRNQGRRTVR
YHDGDDDRSLENVLDFNGCTL"
BASE COUNT 2589 a 1417 c 1765 g 2168 t
ORIGIN
1 cgccagcccg gtcaggcctc ggcgcggcct acacgctccg ctcgctcgct cgctcccgcc
61 tcccgccccg cgcccggcca tggcggagcc gtcgtccgcc cgacgcccgg tgcctctcat
121 cgagtcggag ctgtacttcc ttatcgcccg gtacctatcg gcgggcccgt gtcggagagc
181 ggcccaggtg ctggtgcagg agctggagca gtaccagttg ttgccgaaga gattggactg
241 ggagggcaac gagcacaaca ggagctacga ggagttggtc ttgtccaata agcatgtggc
301 tcctgatcat cttttgcaaa tctgccagcg catcggtcct atgttggata aagaaattcc
361 acccagtatt tcaagagtca cttctttact tggtgcagga aggcagtctt tgctacgtac
421 agcaaaagac tgcaggcaca cagtttggaa gggctctgcc tttgctgctc ttcatagagg
481 aagacctcct gaaatgccag tgaattatgg ttccccacca aatcttgtgg agatacatcg
541 aggaaaacaa ctcacagggt gttccacttt tagtacagca tttccaggaa ctatgtatca
601 gcatataaaa atgcacagaa ggattctcgg acatctatct gctgtttact gtgtagcatt
661 tgataggaca ggacatagaa tctttacagg ttcagatgac tgtttggtaa agatttggtc
721 aacacataat ggccgcttgt tatctacatt aagaggtcat tctgcagaaa tttcagatat
781 ggcagtaaac tatgagaata caatgattgc tgcggggagc tgtgataaaa ttattagagt
841 gtggtgcttg agaacttgtg ccccagttgc tgtgctccaa ggacacacag gatcaattac
901 atctttacag tttagcccga tggccaaagg ctctcaaaga tacatggttt ccactggtgc
961 tgatgggaca gtttgctttt ggcaatggga tttagaatcc ttaaaattta gcccacgtcc
1021 cctgaagttc actgaaaagc ctaggccagg cgttcaaatg ctttgttctt cttttagtgt
1081 tggtggtatg tttttagcca caggtagtac tgatcatgta atcagaatgt attttttggg
1141 ttttgaagca cccgaaaaaa tcgcagaact tgaaagccac actgataaag tagatagtat
1201 ccaattttgt aacaatggtg atcggttcct aagtggtagc agagatggaa cagcacggat
1261 ttggagattt gagcagttag aatggaggag cattttattg gatatggcta ccagaatctc
1321 aggggactta tcttccgaag aggaaaggtt tatgaaacct aaagtaacaa tgatagcttg
1381 gaatcaaaat gatagcattg ttgtcacagc tgtgaatgat catgtcctca aagtgtggaa
1441 ttcttacact ggacaactgc ttcataactt aatgggacat gctgatgaag tatttgttct
1501 ggagacacat ccctttgatt ccagaattat gttatctgca ggacatgatg gcagcatatt
1561 tatatgggat attacaaaag gtaccaagat gaaacattat tttaatatga ttgaaggaca
1621 aggacatgga gctgtgtttg actgtaagtt ttcacaggat ggacagcatt ttgcctgtac
1681 agattctcat gggcaccttc tgatatttgg ttttggatgc agcaaaccat atgaaaagat
1741 tcctgatcag atgttcttcc atactgacta tcgaccactt attagagatt ctaataatta
1801 tgtcttagat gagcaaactc agcaggctcc tcatcttatg cctccaccat tcttggtaga
1861 tgtagatgga aatcctcatc caaccaagta tcagagatta gtaccaggcc gagaaaattc
1921 tgcagatgaa catttgattc cacagctggg ctatgtggca acaagtgatg gagaggtgat
1981 tgaacaaatt ataagcctgc aaaccaatga taatgatgaa cgcagcccag aatcgagtat
2041 tcttgatgga atgataagac agttgcagca gcagcaagat cagagaatgg gagcagatca
2101 ggatactatt ccaagaggac tttcaaatgg tgaagaaaca ccccggagag gttttagaag
2161 gctgagctta gacattcagt cccctccaaa tattggtctg cgtcgtagtg gacaagttga
2221 aggtgttcgt cagatgcatc aaaacgctcc acgcagtcag attgctacag aacgtgacct
2281 gcaggcttgg aaacgaagag tggttgtacc agaggtacca ctaggcatat ttaggaagct
2341 ggaagacttc cgattagaga aaggtgaaga ggaaagaaat ctttatataa taggaagaaa
2401 aagaaagact cttcagctct cacataagtc ggattcagtg gttttggtat cacagtctag
2461 acaaaggaca tgtaggcgta aatatccaaa ttatggtaga agaaatcgta gctggcgtga
2521 gttatcttct ggaaatgagt cttcaagctc tgtaagacat gagacttcct gtgatcagag
2581 tgaaggttct ggttcttcag aagaggatga atggagaagt gacagaaaaa gtgagagtta
2641 cagcgaaagt tcaagtgact cttcatctag atattccgat tggacagctg atgcgggcat
2701 caatttgcag cctcctttaa gaacatcatg tcgtcgacga attactcgat tttgtagtag
2761 ttcagaagat gaaatatcta ctgagaattt atctcctcca aaaagaagac gaaagagaaa
2821 gaaagaaaat aagcctaaga aggagaattt gcggaggatg actccagcag agcttgcaaa
2881 tatggagcat ttatatgaat ttcaccctcc agtttggatt actgacacca cacttagaaa
2941 atctcctttt gttcctcaaa tgggtgatga ggtaatatat tttcgacagg gtcatgaagc
3001 ttatattgag gctgtaagaa gaaataatat ttatgaactg aaccctaata aggagccatg
3061 gagaaaaatg gatcttaggg atcaagaatt ggttaaaata gttggaatac gatatgaagt
3121 tgggccccct acactctgtt gcctaaaact agcatttata gatccagcaa ctggaaaact
3181 tatggacaaa tctttctcta ttagatatca tgatatgcca gatgttattg actttcttgt
3241 attgcgtcaa ttttatgatg aagcaagaca gaggaattgg cagtcttgtg acagattccg
3301 ctctattatt gatgatgctt ggtggtttgg aacagtgtta agtcaagagc catatcaacc
3361 acagtatcct gatagtcatt tccagtgtta tattgttagg tgggataata ctgaaattga
3421 aaaacttagc ccatgggaca tggaaccaat tcctgataat gttgatccac ctgaagaatt
3481 aggagctagt atttctgtca caacagatga gctagagaaa ttgctctata aaccacaagc
3541 tggtgaatgg ggtcagaaat caagagatga agaatgtgat agaattatca gtggtataga
3601 tcaacttttg aatcttgata tagcagcagc ttttgcaggc cctgttgatt tgtgtacata
3661 cccgaagtac tgtactgtag tagcttatcc aaccgatctt tacacaattc gaatgagact
3721 tgttaatcga ttttacagga ggctgtctgc gttagtttgg gaagtcagat atatagaaca
3781 taatgccaga acatttaacg aacctgagag tgtaattgca agatcagcta aaaagataac
3841 tgaccaactt ttaaaattta tcaagaatca acactgtaca aatatctcag aactttctaa
3901 cacatctgaa aatgatgagc aaaatgctga ggatttggat gatagtgatc ttcctaaaac
3961 atcttctgga agaaggagag tccatgatgg gaaaaaaagc atcagagcta cgaactatgt
4021 tgaaagcaac tggaagaaac agtgtaagga actagtgaac ttaatttttc agtgtgaaga
4081 ttctgaacca tttagacaac ctgttgattt ggttgaatat ccagactaca gagatattat
4141 agatacccca atggattttg gaacagtaag ggaaactcta gatgcgggaa attatgacag
4201 ccctttggag ttttgcaaag acatccggct gatatttagc aatgcaaaag cgtatacacc
4261 aaacaaaaga tcaaagattt atagtatgac cttgagatta tctgccttat ttgaagaaaa
4321 aatgaagaaa atctcttctg attttaaaat tggtcaaaaa ttcaatgaaa aacttcgaag
4381 aagccagagg ttcaagcaac ggcaaaattg taaaggtgac agtcagccta acaaaagtat
4441 cagaaacctc aagccgaaga ggttaaaatc tcagacaaaa ataattcctg agttggtagg
4501 ttctcctacc cagtctacct caagtaggac agcttatctt ggaacccaca agacaagtgc
4561 tggtatctct tcaggtgtta cttctggtga ctcttcagat tcagcagaac catcagaaag
4621 gaggaaaaga aatagaccta taacaaatgg ttctacatta tctgaaagtg aagtggaaga
4681 ttctttagct acctctttgt catcgtcagc ttccagtagt tctgaggaaa gcaaagagag
4741 ttccagagct cgtgaatcct cctcacgcag tgggctatcc agaagcagca atctcagggt
4801 aaccagaact agagctgctc aaagaaaaac tggtcccgtt tcattagcaa atggatgtgg
4861 cagaaaagcc actcgaaaga gagtctattt aagtgattct gataacaatt cattggagac
4921 tggtgaaatt ctaaaagcca gagctggaaa taaccgaaaa gtcttaagga agtgtgctgc
4981 tgtggctgcc aataaaataa agctaatgag tgatgtagaa gagaattcta gctctgaaag
5041 tgtctgttct ggtcggaagc tgcctcaccg caatgcttct gctgtagcta gaaaaaagtt
5101 attacataat tctgaagatg aacagagctt aaagtcagaa attgaagaag aggagctaaa
5161 agatgaaaat caaccattac cagtgtccag ttctcacact gcccagagca atgttgatga
5221 atctgaaaac agagactcag agtcagaaag tgatttgcgg gtagcccgga aaaattggca
5281 tgctaatggt tacaagtccc atactccagc accttcaaag acaaaatttc ttaaaataga
5341 gtcttctgag gaagactcta aaagtcatga ttcagatcat gcatgtaaca gaactgctgg
5401 cccatcaacg tctgtgcaga aacttaaggc agagagcatc tcagaggaag cagattctga
5461 accaggaaga tctggtggta ggaaatacaa tacatttcac aagaatgcga gtttctttaa
5521 aaaaaccaag attctgagtg actcagaaga ctctgaatct gaagagcaag atagagaaga
5581 tgggaaatgt cataaaatgg aaatgaaccc aatttcagga aatctgaact gtgaccctat
5641 tgctatgtcc cagtgttcct cagatcatgg atgtgaaact gatttagatt cagatgatga
5701 caaaatagaa aaaccaaaca attttatgaa agattctgca tcacaagaca atggactaag
5761 cagaaaaatt tccaggaaaa gggtctgttc cagtgactca gacagtagtt tacaggtggt
5821 taagaaatca tcaaaagcca gaacaggtct cctgaggatt actcgaagat gtgcagctac
5881 ggctgccaat aagatcaagc tcatgagtga tgtagaagat gtcagtttag aaaatgtgca
5941 cactagaagc aaaaatggaa ggaaaaaacc tctccatctt gcttgtacta cagctaagaa
6001 gaaattgagt gattgtgaag gaagtgtaca ttgtgaagta ccaagtgaac agtatgcctg
6061 tgaaggcaag ccacctgatc ctgactccga aggtagtaca aaagtgctta gtcaggctct
6121 aaatggagac tcagactctg aagatatgtt gaattcagaa cacaagcaca ggcataccaa
6181 tattcacaaa atagatgcac cttctaaaag aaaaagttcc tctgttacat cttcaggaga
6241 agattcaaaa agtcatattc cagggagtga gactgatagg acattttctt cagagtcaac
6301 cttggcacaa aaagctactg cagagaataa ttttgaagtg gaactgaatt atgggctgcg
6361 caggtggaat ggcagaagac tcaggaccta tggaaaggct ccttttagta agacaaaagt
6421 gattcatgat tcacaggaaa cagcagagaa ggaagtaaaa aggaagagat cgcatcctga
6481 attggaaaat gtgaaaatct ctgaaacaac tgggaattca aagtttagac ctgatactag
6541 ttccaaatca tcagatttgg gatctgtaac tgaatcagat attgactgta ctgataatac
6601 aaaaaccaaa aggaggaaaa cgaaaggaaa agcaaaagta gttagaaaag gtaaaacttt
6661 tacagctaac atatctaaaa ctgtgagacg tcaaagacaa agcaaacgcc ctaggttaag
6721 tgtggatgat aatgactggg aggatttgga ctatgcaaaa tctaaaagag ttcttcgacg
6781 ttcaaaaata aaaacgagaa atcagggtag aaggactgtg agataccatg atggggatga
6841 tgacagaagt ttagaaaatg tgttagattt caatggttgc accttatgac cttgagggaa
6901 agccagttca tttaagagga aatggactgg catttatggt gaaagctggc tgttaaaatt
6961 atttttttgt cttacaattc agggaatata tttatatttt tctatgaaaa gttatgaatg
7021 tgactaaatc atgactgtta tttttatttg cacttgctgg tctttgtagc agcattcagc
7081 acaggtgcca aaatatgctt cattttgggg gcagatctat tttgacagta tttgactaca
7141 tatagcaaga gtttgaaata tgttaaacac tagacatcct ggttatcaaa accaatgagc
7201 attactttca tggcagcaag tgtcatgcag ttattttctg aatttgtcaa agaggcagta
7261 gtttctaacc cctgttctat agtagttaca acaatttcac aacctatgtt tacagattct
7321 tcataaatac atgcatactg acactataat catgggaggt gtaaccatga ttagtaggcg
7381 aggtacctac cacttttttt tttttcttcc cctggctact tgagtagaat gcattatacc
7441 agatctggtc actttcattg aaatgggttc taattttctt cccaagtgct gttgggtttt
7501 tttcttctta aggaaaacgt tgtcactttt atgttataaa cttgaattta taaagtgctg
7561 gtaaattaaa aaaaaaaaaa aaagtgcatg ttttaaacct ctaggcagag catagtcaga
7621 gcattttctt ttaatgtgca ctaacaaaat gctatataat ctgtcttctg ccaagatctc
7681 ctggtttcca ttgtaaggga tttaaccaga atcttgctct tccataatct tactctgtga
7741 aatagaggaa ttcgtgtgcc ttagatttag aagtgtgttc tttaatagag tgtacagggc
7801 taaaagagta tttaagttaa tatgtaggtt tcccccatct gtattccaat tgtagaggtg
7861 agttttgtta agagtacaat tgcaaatctt atctatatag gaaaatagct aaatgtcatt
7921 ctccatctct ttgttttag
//