LOCUS AJ292348 8500 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens mRNA for FYVE and coiled-coil domain containing 1 (FYCO1 gene). ACCESSION AJ292348 VERSION AJ292348.2 KEYWORDS FYCO1 gene; FYVE and coiled-coil domain containing 1. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 AUTHORS Kiss H. JOURNAL Submitted (04-JAN-2001) to the INSDC. Kiss H., Microbiology and Tumorbiology Center (MTC), Karolinska Institute, Box 280, Stockholm, S-17177 , SWEDEN. REMARK Revised by [3] REFERENCE 2 AUTHORS Kiss H., Yang Y., Kiss C., Andersson K., Klein G., Imreh S., Dumanski J.P. TITLE The transcriptional map of the common eliminated region 1 (C3CER1) in 3p21.3 JOURNAL Eur. J. Hum. Genet. 10(1), 52-61(2002). PUBMED 11896456 REFERENCE 3 (bases 1 to 8500) AUTHORS Kiss H. JOURNAL Submitted (05-MAR-2001) to the INSDC. Kiss H., Microbiology and Tumorbiology Center (MTC), Karolinska Institute, Box 280, Stockholm, S-17177 , SWEDEN. FEATURES Location/Qualifiers source 1..8500 /db_xref="H-InvDB:HIT000246586" /organism="Homo sapiens" /chromosome="3" /map="3p21.3" /mol_type="mRNA" /db_xref="taxon:9606" CDS 200..4636 /gene="FYCO1" /product="FYVE and coiled-coil domain containing 1" /db_xref="GOA:Q9BQS8" /db_xref="H-InvDB:HIT000246586.15" /db_xref="HGNC:HGNC:14673" /db_xref="InterPro:IPR000306" /db_xref="InterPro:IPR004012" /db_xref="InterPro:IPR009038" /db_xref="InterPro:IPR011011" /db_xref="InterPro:IPR013083" /db_xref="InterPro:IPR017455" /db_xref="InterPro:IPR036598" /db_xref="InterPro:IPR037213" /db_xref="PDB:5CX3" /db_xref="PDB:5D94" /db_xref="UniProtKB/Swiss-Prot:Q9BQS8" /protein_id="CAC33883.1" /translation="MASTNAESQLQRIIRDLQDAVTELSKEFQEAGEPITDDSTSLHK FSYKLEYLLQFDQKEKATLLGNKKDYWDYFCACLAKVKGANDGIRFVKSISELRTSLG KGRAFIRYSLVHQRLADTLQQCFMNTKVTSDWYYARSPFLQPKLSSDIVGQLYELTEV QFDLASRGFDLDAAWPTFARRTLTTGSSAYLWKPPSRSSSMSSLVSSYLQTQEMVSNF DLNSPLNNEALEGFDEMRLELDQLEVREKQLQERMQQLDRENQELRAAVSQQGEQLQT ERERGRTAAEDNVRLTCLVAELQKQWEVTQATQNTVKELQTCLQALELGAAEKEEDYH TALRRLESMLQPLAQELEATRDSLDKKNQHLASFPGWLAMAQQKADSASDTKGRQEPI PSDAAQEMQELGEKLQALERERTKVEEVNRQQSAQLEQLVKELQLKEDARASLERLVK EMAPLQEELSGKGQEADQLWRRLQELLAHTSSWEEELAELRREKKQQQEEKELLEQEV RSLTRQLQFLETQLAQVSQHVSDLEEQKKQLIQDKDHLSQQVGMLERLAGPPGPELPV AGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQLDDTKVQEGSQEEELRQANRELEKE LQNVVGRNQLLEGKLQALQADYQALQQRESAIQGSLASLEAEQASIRHLGDQMEASLL AVRKAKEAMKAQMAEKEAILQSKEGECQQLREEVEQCQQLAEARHRELRALESQCQQQ TQLIEVLTAEKGQQGVGPPTDNEARELAAQLALSQAQLEVHQGEVQRLQAQVVDLQAK MRAALDDQDKVQSQLSMAEAVLREHKTLVQQLKEQNEALNRAHVQELLQCSEREGALQ EERADEAQQREEELRALQEELSQAKCSSEEAQLEHAELQEQLHRANTDTAELGIQVCA LTVEKERVEEALACAVQELQDAKEAASREREGLERQVAGLQQEKESLQEKLKAAKAAA GSLPGLQAQLAQAEQRAQSLQEAAHQELNTLKFQLSAEIMDYQSRLKNAGEECKSLRG QLEEQGRQLQAAEEAVEKLKATQADMGEKLSCTSNHLAECQAAMLRKDKEGAALREDL ERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLIELLR DKDALWQKSDALEFQQKLSAEERWLGDTEANHCLDCKREFSWMVRRHHCRICGRIFCY YCCNNYVLSKHGGKKERCCRACFQKLSEGPGSPDSSGSGTSQGEPSPALSPASPGPQA TGGQGANTDYRPPDDAVFDIITDEELCQIQESGSSLPETPTETDSLDPNAAEQDTTST SLTPEDTEDMPVGQDSEICLLKSGELMIKVPLTVDEIASFGEGSRELFVRSSTYSLIP ITVPEAALTISWVFSSDPKSISFSVVFQEAEDTPLDQCKVLIPTTRCNSHKENIQGQL KVRTPGIYMLIFDNTFSRFVSKKVFYHLTVDRPVIYDGSDFL" regulatory 8477..8482 /regulatory_class="polyA_signal_sequence" BASE COUNT 2242 a 2204 c 2319 g 1735 t ORIGIN 1 cgtcatggcc gtcagcaccg cgttcccgtc ctcttccgct tggccccaga aagtttcggt 61 tctgcccggc ggtggaccca cgagcgcgtg ccaccatgga gtctgaccac tgctgagcag 121 acagccaccg agggccgaaa ttctgagcct tcctctggac ccaggcagga gacatacaga 181 caagaaaggc aaactcacca tggcctccac caatgcagag agccagctcc agagaatcat 241 ccgagacttg caagatgctg tgacagaact aagcaaagaa tttcaggaag caggggaacc 301 catcacggat gacagcacca gcttgcataa attttcttat aaacttgagt atctcctgca 361 atttgatcag aaagagaagg ccaccctcct gggcaacaag aaggactact gggattactt 421 ctgtgcctgc ctggccaagg tgaaaggagc caatgatggg atccgatttg tcaagtctat 481 ctcagagctc cgaacatcct tggggaaagg aagagcattt attcgctact ccttggtgca 541 ccagaggttg gcagacacct tacagcagtg cttcatgaac accaaagtga ccagtgactg 601 gtactatgca agaagcccct ttctgcagcc aaagctgagc tcggacattg tgggccaact 661 ctatgagctg actgaggttc agtttgacct ggcgtcgagg ggctttgact tggatgctgc 721 ctggccaaca tttgccagga ggacgctgac cactggctct tctgcttacc tgtggaaacc 781 ccctagccgc agctccagca tgagcagctt ggtgagcagc tacctgcaga ctcaagagat 841 ggtgtccaac tttgacctga acagccccct aaacaacgag gcattggagg gctttgatga 901 gatgcgacta gagctggacc agttggaggt gcgggagaag cagctacagg agcgcatgca 961 gcagctggac agagagaacc aggagctgag ggcagctgtc agccagcaag gggagcaact 1021 gcagacagag agggagaggg ggcgcactgc agcggaggac aacgttcgcc tcacttgctt 1081 ggtagctgag ctccagaagc agtgggaggt cacccaggcc acccagaaca ctgtgaagga 1141 gctgcagaca tgcctgcagg ccctggagct aggagcagca gagaaggagg aggactacca 1201 cacagccctg cggcggctgg agtccatgct gcagcccttg gcacaggagc ttgaggccac 1261 acgggactca ctggacaaga aaaaccagca tttagccagc ttcccaggct ggctagccat 1321 ggctcagcag aaggcagatt cggcatcaga cacaaagggc cggcaagaac ctattcccag 1381 tgatgcggcc caggagatgc aggagctagg ggagaagctt caagccctag aaagggagag 1441 aaccaaggtc gaggaggtca acagacagca gagtgcccaa ctggaacagc tggtcaagga 1501 gcttcagctg aaagaggatg cccgggccag cctggagcgc ctggtgaagg agatggcccc 1561 actccaggag gagttgtctg ggaagggaca ggaggcagac cagctctggc gacggctgca 1621 ggagttgctg gcccacacga gctcctggga ggaggagcta gcagagttga ggcgggagaa 1681 aaaacagcaa caggaggaga aggagctgct ggagcaggag gtcaggtctc tgacccggca 1741 gctgcagttc ctggagaccc agctggcaca ggtgagccaa catgtgagtg acctggagga 1801 gcagaagaag cagctcattc aggacaaaga ccacctcagc cagcaggtgg gtatgctcga 1861 gcggcttgct gggccgcctg gcccagaact gccagtggca ggtgagaaga atgaggccct 1921 ggtccctgtg aactccagtc tgcaagaggc ctgggggaag ccagaggagg agcagagggg 1981 cctgcaggag gcacagttag acgataccaa ggtgcaagag ggcagccagg aggaagagct 2041 ccggcaggcc aacagggagc tggagaagga gctacagaat gtggtcgggc gtaaccagct 2101 cctggagggc aagctgcaag ccctgcaggc cgattaccag gctttgcagc agcgggaatc 2161 agccatccag ggctccttgg cctccctgga ggccgagcag gccagcatcc ggcacttggg 2221 tgaccagatg gaggcgagct tgctggctgt aaggaaggcc aaggaggcca tgaaagccca 2281 gatggcagag aaggaggcca ttctacagag caaggagggc gagtgtcagc agctgcggga 2341 ggaggtggag cagtgccagc aactggcaga agcccggcac agagagctta gggctctcga 2401 gagccagtgc cagcagcaga cccagctgat tgaggtcctc acagcagaga aaggccaaca 2461 gggagttggc ccacccactg acaatgaagc ccgtgagctg gctgcccagc tagccctgtc 2521 tcaggcgcag ctggaagtcc atcaggggga ggtccaacgg ctgcaggctc aggtggtgga 2581 cctccaggcc aagatgcggg cagccctgga tgaccaggac aaggtgcaga gccagctaag 2641 catggctgag gccgtcctga gggagcacaa aacccttgtg cagcagctga aggagcagaa 2701 tgaagccctt aacagagccc atgtccagga gctgctgcaa tgctcggagc gtgaaggggc 2761 actgcaggag gagagggccg atgaggccca gcagagggag gaggagctgc gggccctgca 2821 ggaggagctg tcccaggcca aatgcagctc cgaggaagca cagctggagc acgctgagct 2881 gcaagagcag ctgcaccggg ccaacacaga cacagctgag ctgggcatcc aggtttgcgc 2941 actgaccgtg gaaaaggagc gagtggagga ggcactggcc tgtgctgtcc aggagctcca 3001 ggacgccaaa gaggcagcct caagggagcg agagggcctg gagcgccaag tagctgggct 3061 gcagcaagag aaggagagct tgcaggagaa gctgaaggcg gccaaggcag cagccggctc 3121 actgcctggc ctgcaggccc agctcgccca ggcagagcag cgggcccaga gcctccaaga 3181 ggctgcacac caggagctca acaccctcaa gttccagctg agtgctgaaa tcatggacta 3241 ccagagcaga cttaagaatg ctggtgaaga gtgcaagagc ctcaggggcc agcttgagga 3301 gcaaggccgg cagctgcagg ctgctgagga agctgtggag aagctgaagg ccacccaagc 3361 agacatggga gagaagctga gctgcactag caaccatctt gcagagtgcc aggcggccat 3421 gctgaggaag gacaaggagg gggctgccct gcgtgaagac ctagaaagga cccagaagga 3481 actcgaaaaa gccacaacaa aaatccaaga gtattacaac aaactctgcc aggaggtgac 3541 aaatcgtgag aggaatgacc agaagatgct tgctgacctg gatgacctca acagaaccaa 3601 gaagtatctc gaggagcggc tgatagagct gctcagggac aaggatgctc tctggcagaa 3661 gtcagatgcc ctggaattcc agcagaagct cagtgctgag gagagatggc tcggagacac 3721 agaggcaaac cactgcctcg actgtaagcg ggagttcagc tggatggtgc ggcggcacca 3781 ctgcaggata tgtggccgca tcttctgtta ctactgctgc aacaactacg tcctgagcaa 3841 gcacggtggc aaaaaggagc gctgctgccg agcctgtttc cagaagctca gtgaaggccc 3901 tggctcccct gatagcagtg gctcaggcac tagccaggga gagcccagcc ctgcactgtc 3961 accagcctca cctgggcccc aggccacagg aggccaagga gcaaatacag actacaggcc 4021 accggacgac gctgtgtttg atatcatcac agatgaggaa ttgtgccaga tacaggagtc 4081 cggctcctct ttgcctgaaa cacccactga aactgattct cttgacccaa atgcggctga 4141 acaggatact acatcaacct cgctaacgcc tgaggacact gaagacatgc ccgtggggca 4201 ggattcggaa atctgcctgc tgaagtctgg agaactgatg atcaaagtac ccctcacagt 4261 ggatgagatc gccagcttcg gggagggtag cagggagctg tttgtgaggt ccagcaccta 4321 cagcctgatc cccatcactg tgcccgaggc agccctcacc atcagctggg tcttctcctc 4381 tgaccccaag agcatctcct tcagtgtggt cttccaggag gccgaggaca caccgctgga 4441 tcagtgtaag gtcctcattc ccacgacccg atgcaactcc cacaaggaga acatccaggg 4501 ccagctcaag gttcgcacac ccggcatcta catgctcatc ttcgacaata ccttctcaag 4561 gtttgtctct aaaaaggtat tttatcactt gacggttgat cggcctgtga tctacgatgg 4621 aagtgatttc ctgtagcttc agcacctcag taacttcact tcatccacag gaaacactgc 4681 tcttcctcac ctgtcacata aagcattttt ttaaaaagtc agctgctcca aaatcatcaa 4741 ctcagcccct gggctgcccc tcagaggcgg tgtctgggga ggactttgtg ctcagcactc 4801 tgcaccggcc actcttagcc cccgaggcgt tgaagggctc aggcaatgtt tccattaagt 4861 agagactcag ctgttgtcac acccaaaggg atgctctgcc aaaggtttaa acacccagga 4921 gaccatcagc ctctcctggg agcacagttg actacaggcc tcttgtggag agtttcacgg 4981 gcaggggtga ttccaacttc tgcctgtgga gagattttct gccctgcccc accagggccc 5041 tgcatgttgg agactgagct gggtgcactg gccataccct gtgaatcctc gggctgtgac 5101 gccctcaggt actcctggga aaaggaggta cacagccatc atgcgagtcg gtgccagggg 5161 accccccgga gatcctgacc agctcctcca gtcatgctct tgtccctcac tgccccagta 5221 agctggaggc tgctccagaa ctcagcagtg ttggaggggc ctctaagctg cactctcttt 5281 ctggcccttt tgtctggctg attctgtcct caaataaagc ccttcactca gccagacctc 5341 tccacagctc aaagcattgc cctaagaatc agaagtaaag ataatccaag agcaaaaccc 5401 actgtacttg gggcctgcaa tggctgtgtg tacactacat ctaatgccca aatgccagcc 5461 agtgtggatg ttgtgaccac agagcaggat tgtgcattgg ctttagagct actcctcagc 5521 tgatggccca cttttgttta tataaataag agcttctgcc ccacctgcag acatgtttac 5581 taatgatcat agccaggatt agaaccactt tcaaacattg gggccttctt aacaaaagtc 5641 tttgataact taagaaccaa agtaacagag taaacagagg catgatggat ccctgggccc 5701 cactcccctc ctgacaggtt ccccaacagc ccatttgccc acttcccact gctcagccca 5761 caccagacct ccaggagaca tccccccttg aggcagagag atcctgttcc ctattcccag 5821 acaagaatta tttaatcttc cctgttctct gtggtccttt tcttccccaa caacagatag 5881 ctcaccttgg acagctcttc gtcccttgtt catggaacca gctgcctgca gtcaggcccc 5941 aggttcttcc atgggtgaac agagcatctg acaaaaggtc ccagtttggc caggggtgag 6001 ggagagagca ccagacaggc tatccgagaa tctgagagct gggcccggca attcctccag 6061 ctacccttgt gacctaagtc cagtcacaca tttcccaaag tttctctttg tcataaccct 6121 ggtctggctg gttttgaggg cttgagaatg ggtcagggac tccaggccaa gtccaacaga 6181 gaccccaaac ccaccacaca ccagcagcca caacctcacc accaacaaag aggacttttg 6241 tggggccaca agtaagaggt catttctgga atggactcag acctttaaac aggagagttg 6301 agcacttcca gtcagttttt aagcaaggca tggggaacag ggaatagaac ctttcaaaga 6361 ggttgcccag agaaaagctg ggcctcttgc attcggcttc cttggagcag cctcttctgg 6421 cagaaagcca tcaggtgctc aatcatcttc tcctggccaa ggctctgacc atgcttagta 6481 ctggaataga ggtggccagg cccccagcga ctcttcttgg cctgatgttt gtcctcacag 6541 gcatgccacg tggcctgaga tgattcagaa caaatcatgc taactttgaa tccatccagc 6601 cacttgcaaa tgataatcag aagtcagctt gttcactgtt agaaagaaac taacaaaaga 6661 gaacccagag caatctagaa tctttgagtg cttggctttc caaggatact gcggagactc 6721 tggccaagct gatgaccttc tgaagtgtca ctggcaccat atgcaacaag aaccaccatt 6781 cactgagtag ctaatgggtt tggggcctgg gacattccat ctgaggtcct tcctgaacat 6841 gtcactccac agcagaggac cggttgcagc ttacccagaa ccactcctcc aggagagctg 6901 gatgttttgc gtgcaacacc ttgagcactg actgctattg ttcaaaaaaa gcctttgctg 6961 cattcggagg actgccccgt gccctgaggt gacttcctaa ctatgtggtt tcattagcga 7021 atttattttt tgggctgggt ggacatttgt attttgttag gttgctgttt aagctcaagt 7081 ttgctgtgct ctctgcagct acaaaacatc ttggcatatt taagagtggc ttttataaat 7141 agctttattc tgatattaat cagattccca actttactga gaattaagga ctggggtact 7201 ttaaagaaat gcaaatagca attgaagaac cactgctgca ggtggtagcc ctggctagac 7261 tgaattacac tagaaatcag ccagaaggaa gcgtccttgg gatcccagat cactcttttt 7321 tttttttttt tttaaaaggg gcagcccctt gatggctcat ctctctgaat aacagttacg 7381 tcttcatatc gataccagat gccttcttca tcatgccact gaagccactc accaccttca 7441 agaacatgcc aacctctgtc agattcactt acccacaaac aaggaggcac gtttggcaca 7501 aagtgttgtc ctccaggtcc aagtggactc tacagagtgc ttgacctcaa cacactggat 7561 tccaggtgga ctggaccaag agcaggcaaa gacacgggaa ctgaaaaact ccacagggtt 7621 tggagaatag aaatgaaaag ccacgtcata taactcaaga ataaatggtg ttttggaaat 7681 tttaaaatta tcatcgaagg tggtgaaact atttcaggcc caaatgaaag gaaatcgcca 7741 gttggggatg aaatcacaga gcctgtgttt tatgatatgg ttggatgtcc actgatgaaa 7801 ttttaaagga gtttcatttt taaaagtgcg catgattcta catatgagaa ttctttaggc 7861 caagaaactg tccttggctc agaggtgttg ggaattaaag cagagagaag ccattcgtga 7921 tgcttagaac caaggatggt catgtacaca aagaccatcg agacggccat tcttgtttac 7981 aaaacactta ccaagaaagc actttgtagg ggaactttag taagttcttc tcatttcatt 8041 atgtttcttc caaggaaaca ggagagactg aattaataat tctctctttc ctcttaagca 8101 cttttaaaat aataaagtac atcttgaaat ttggggaggc atctctgatt taaaaaaaga 8161 aaaaggctgc ttgatgtatg ttatgcagag acactctgcc tctggtggct gcagagcaat 8221 acccaagcct catttggaag gctcaacatt tggaattgca ctttaattga ttaatcctca 8281 attcatgtgg ccttacggga tggtgggtct gggaccccaa ttcattctta tctgccaaag 8341 aattatctag aagcacatca aataccagca ccccacctgc acaatggggg tggaaaactt 8401 ttgtatccct aagcatatta ttttatagtg tctgccatgc catgtggaaa tactttattt 8461 ttaacctcag gatttaaata aagtaaacac tatgacattt //