LOCUS AJ286697 1433 bp DNA linear PLN 15-APR-2005
DEFINITION Gardenia angusta chloroplast partial rbcL gene for
ribulose-1,5-bisphosphate carboxylase, large subunit.
ACCESSION AJ286697
VERSION AJ286697.1
KEYWORDS large subunit; rbcL gene; ribulose-1,5-bisphosphate carboxylase.
SOURCE chloroplast Gardenia jasminoides
ORGANISM Gardenia jasminoides
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae;
Ixoroideae; Gardenieae complex; Gardenieae - Pavetteae clade;
Gardenieae; Gardenia.
REFERENCE 1 (bases 1 to 1433)
AUTHORS Andreasen K.
JOURNAL Submitted (02-FEB-2000) to the INSDC. Andreasen K., University of
California, Berkeley, Jepson Herbarium and Department of
Integrative Biology, 1001 Valley Life Sciences Bldg. no. 2465,
Berkeley, California, 94720-2465, USA.
REFERENCE 3
AUTHORS Andreasen K., Bremer B.
TITLE Combined phylogenetic analysis in the Rubiaceae-Ixoroideae:
morphology, nuclear and chloroplast DNA data
JOURNAL Am. J. Bot. 87(11), 1731-1748(2000).
PUBMED 11080124
FEATURES Location/Qualifiers
source 1..1433
/organism="Gardenia jasminoides"
/organelle="plastid:chloroplast"
/mol_type="genomic DNA"
/db_xref="taxon:114476"
CDS <1..1417
/codon_start=2
/transl_table=11
/gene="rbcL"
/product="ribulose-1,5-bisphosphate carboxylase, large
subunit"
/db_xref="GOA:Q9GGC2"
/db_xref="InterPro:IPR000685"
/db_xref="InterPro:IPR017443"
/db_xref="InterPro:IPR020878"
/db_xref="InterPro:IPR020888"
/db_xref="InterPro:IPR033966"
/db_xref="InterPro:IPR036376"
/db_xref="InterPro:IPR036422"
/db_xref="UniProtKB/TrEMBL:Q9GGC2"
/protein_id="CAC16584.2"
/translation="SVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
GAAVAAXSSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEEDQFIAYVAYPLDLFEEG
SVTNMFTSIVGNVFGFKALRALRLEDLRIPTSYVKTFQGPPHGIQVERDKLNKYGRPL
LGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYK
AQAETGEIKGHYLNATAGTCDEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCR
DNGLXLHIHRAMHAVIDRQKNHGIHFRXLAKALRMSGGDHIHAGTVVGKLEGERDITL
GFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVIPVASGGIHVWHIPALTEIFGDDAVLQ
FGGGTLGHPWGNAPGAVANRVALEACVKARNEGRDLAVEGNEIIREXSKWSPELAAAC
EVWKEIRFNFDAVDKLDKVVX"
BASE COUNT 389 a 272 c 350 g 414 t
ORIGIN
1 aagtgttgga ttcaaagctg gtgttaaaga gtacaaattg acttattata ctcctgaata
61 cgaaaccaaa gatactgata tcttggcagc attccgagta actcctcaac cgggagttcc
121 acctgaagaa gcgggggccg cggtagctgc cgawtcttct actggtacat ggacaactgt
181 gtggaccgat gggcttacca gccttgatcg ttacaagggt cgatgctatc acatcgagcc
241 agttcctgga gaagaagatc aatttattgc ttatgtagct taccccttag acctttttga
301 agaaggttct gttactaaca tgtttacttc cattgtaggt aatgtatttg ggttcaaagc
361 cctgcgcgct ctacgtctgg aagatttgcg aatccctact tcttatgtta aaaccttcca
421 agggccgcct catggcatcc aagttgagag agataaattg aacaagtatg gtcgtcccct
481 gttgggatgt actattaaac ctaaattagg tttatctgct aaaaactacg gtagagctgt
541 ttatgaatgt cttcgcgggg gacttgattt taccaaagat gatgaaaacg tgaactccca
601 accatttatg cgttggagag atcgtttctt attttgtgct gaagcgcttt ataaagcaca
661 agctgaaaca ggtgaaatca aagggcatta cttgaatgct actgcaggta catgcgacga
721 aatgatgaaa agagctgtat ttgctagaga attgggagtt cctatcgtaa tgcatgatta
781 cttaacaggg ggattcactg caaataccag cttggctcat tattgccgag ataatggcct
841 acwtcttcac atccaccgcg caatgcatgc ggttattgat agacagaaga atcatggtat
901 hcacttccgc ntactagcta aagcgttacg tatgtctggt ggagatcata tycacgccgg
961 taccgtagta ggtaaacttg aaggggaaag agatatcact ttgggctttg ttgatttact
1021 gcgtgatgat tttattgaaa aagatcgaag ccgcggtatt tatttcactc aagattgggt
1081 ctctctacca ggtgttatmc ccgtggcttc aggaggtatt cacgtttggc atatccctgc
1141 tctgaccgag atctttgggg atgatgctgt actacagttc ggtggaggaa ctttaggaca
1201 cccttggggt aatgcgccag gtgctgtagc gaatcgagta gctctagaag catgtgtaaa
1261 agctcgtaat gaagggcgtg atcttgctgt tgagggtaat gaaattatcc gcgagsctag
1321 taaatggagt cctgaactag ctgctgcttg tgaggtatgg aaggaaatcc gattcaattt
1381 tgacgcggtg gataaattgg ataaagtcgt twcttagtta aatttcaatt aaa
//