LOCUS AJ279081 2916 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for putative transcription factor (ORF1), short
splice variant.
ACCESSION AJ279081
VERSION AJ279081.1
KEYWORDS alternative splicing; S1 RNA binding protein; transcription factor.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2916)
AUTHORS Chapot-Skovsgaard F.M.
JOURNAL Submitted (28-SEP-2000) to the INSDC. Chapot-Skovsgaard F.M.,
Division of Medical Genetics, Faculte de Medecine, 1, rue Michel
Servet, 1211 Geneva 4, SWITZERLAND.
REFERENCE 2
AUTHORS Chapot-Skovsgaard F.M., Guipponi M., Lyle R., Antonarakis S.E.
TITLE Isolation and initial characterization of a putative human
chromosome 21 transcription factor
JOURNAL Unpublished.
COMMENT Related sequence AJ279080
FEATURES Location/Qualifiers
source 1..2916
/db_xref="H-InvDB:HIT000246491"
/organism="Homo sapiens"
/chromosome="21"
/map="21q22.11"
/mol_type="mRNA"
/country="Switzerland"
/dev_stage="fetal and adult"
/tissue_type="brain, testis, heart, kidney, placenta,
lung, muscle"
/db_xref="taxon:9606"
CDS 17..1552
/product="putative transcription factor"
/note="ORF1"
/note="S1 RNA binding protein"
/db_xref="GOA:Q9Y5B6"
/db_xref="H-InvDB:HIT000246491.13"
/db_xref="HGNC:HGNC:13579"
/db_xref="InterPro:IPR012890"
/db_xref="InterPro:IPR022783"
/db_xref="UniProtKB/Swiss-Prot:Q9Y5B6"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAC40814.1"
/translation="MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGP
GGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVP
RASLLSFQDEEEENEEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNSSAESEQ
PLDKTGHVKDTNQEDGVIISEHGEDEMDMESEKEEEKPKTGGAFSNALSSLNVLRPGE
IPDAAFIHAARKKRQMARELGDFTPHDNEPGKGRLVREDENDASDDEDDDEKRRIVFS
VKEKSQRQKIAEEIGIEGSDDDALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEV
NMYYQNTYQTMPYGSSYGIPYSYTAYGSSDAKSQKTDNTVPFKTPSNEMTPVTIDLVK
KQLKDRLDSMKELHKTNRQQHEKHLQSRVDSTRAIERLEGSSGGIGERYKFLQEMRGY
VQDLLECFSEKVPLINELESAIHQLYKQRASRLVQRRQDDIKDESSEFSSHSSQSILK
TKL"
BASE COUNT 954 a 554 c 688 g 720 t
ORIGIN
1 cgccgtcggc cgcgggatgt tccgaaaggc ccggcgggtg aacgtgcgca agcggaacga
61 ctccgaagag gaagagcggg aacgcgatga ggagcaggag ccgccgccgt tgttgccgcc
121 gccgggcacg ggcgaagagg cgggccccgg tggcggcgac agggcccctg gcggggagtc
181 gctgctgggc ccggggccgt cgccgccttc cgcgctgacc ccgggcctcg gggctgaggc
241 cgggggcggc ttccccggcg gcgcggagcc cggcaacggg ctgaagccgc gcaagaggcc
301 tcgcgagaac aaagaggtgc cccgggccag cctgctcagc ttccaggacg aggaggaaga
361 aaatgaagaa gttttcaaag tgaagaaatc aagttatagc aaaaagatag taaaattgct
421 caagaaggaa tataaagaag atcttgaaaa atcgaagatt aagacagaac tcaactcatc
481 agctgaaagt gaacaacctt tggacaaaac aggacatgtt aaggatacaa atcaagaaga
541 tggagttatc atcagtgaac atggtgaaga tgaaatggat atggaaagtg aaaaagagga
601 agaaaagcca aagactggtg gagctttttc aaatgcttta tcttcattga atgttcttcg
661 tccaggagaa attccagatg cagcttttat acatgctgca aggaaaaagc gccaaatggc
721 ccgagaattg ggagatttca ctcctcatga taatgagcct ggtaaaggcc gccttgttag
781 agaagatgag aatgatgcca gtgatgatga agatgacgat gagaaacgcc ggatagtttt
841 ttctgtgaaa gaaaagtcac aaagacaaaa aattgctgag gaaataggaa ttgaggggag
901 tgatgatgat gctttagtaa ctggagaaca ggatgaagag ctcagccgat gggaacagga
961 gcagataagg aaaggaatta atatccctca ggttcaagcc agtcaacccg cagaagtgaa
1021 tatgtactac cagaacactt accagacaat gccttacggc tcatcctatg gcattcctta
1081 tagttatacg gcctatggat catcagatgc caaatctcaa aaaacagata atacagtccc
1141 tttcaaaact cccagtaatg agatgactcc cgttactatt gatttggtaa agaaacagct
1201 taaagacagg ttggactcca tgaaagaatt gcacaaaaca aatcgacagc agcatgagaa
1261 acatctgcaa agccgagtgg actctaccag ggctattgaa agattagaag ggtcttctgg
1321 gggtattggt gaacggtata aatttttgca agaaatgcga gggtatgtcc aagacttgct
1381 tgagtgtttc agtgaaaagg tgccactgat taatgaactt gaatcagcaa tacatcagct
1441 gtacaaacag cgagcttccc gccttgtcca aagacgacaa gatgatatta aagatgaatc
1501 ttcggagttt tcaagccatt caagtcagtc catcttgaag acaaagctct gatggcacca
1561 aatcttgact cctttggacg cgatcgggca ctgtatcaag agcatgcaaa acgtcgcatt
1621 gcagagcggg aggccaggag gactcgtcgt agacaagcca gagaacaaac cggtaagatg
1681 gcagatcacc ttgaaggcct ttccagtgat gatgaagaaa cttctacaga tattactaat
1741 ttcaatctgg aaaaagatcg aatttcaaaa gaatccggca aagtttttga agatgtcctt
1801 gaaagtttct attcaattga ctgtattaaa tcacagtttg aagcatggcg ttcaaaatac
1861 tacacatcct acaaagatgc ttacattggc ctttgtttgc caaaattatt caaccccctc
1921 atacgacttc agctcctcac ttggactcct cttgaggcaa aatgtcgtga ctttgagaat
1981 atgctgtggt ttgaatcttt gctgttttat ggttgtgaag aacgagagca agaaaaagat
2041 gatgtagatg ttgccctact acctaccatt gtggaaaagg tgattcttcc taaactaaca
2101 gtgatagctg aaaatatgtg ggaccctttt tctacaacac agacttcaag aatggtggga
2161 attacactaa aattaatcaa tggatatcct tcagtagtga atgcagaaaa taaaaataca
2221 caggtatacc taaaggcact tttattgaga atgagaagaa ctttagatga tgatgtattt
2281 atgcccttat atcccaaaaa tgtcttagaa aataaaaatt ctgggcctta cttgtttttt
2341 caacgacagt tttggtcttc agttaagctg ttaggcaatt ttcttcagtg gtatggcatt
2401 ttctcaaata aaactctgca agagttatca atagatggtt tattaaatcg atatattctc
2461 atggcttttc agaattcaga atatggagat gacagcatca aaaaagccca aaatgtaatc
2521 aattgtttcc ccaaacaatg gttcatgaat ctgaaaggag aaaggactat ttctcagtta
2581 gaaaactttt gccgatacct tgtacactta gcggatacaa tttatagaaa tagtatcggg
2641 tgttctgatg tggaaaaaag aaatgcaagg gaaaacataa aacagatagt aaaactcctt
2701 gcaagtgttc gagctttgga tcatgctatg tctgttgcaa gtgaccacaa tgtgaaagaa
2761 tttaagtctt tgatcgaagg aaaatagatc tatgagactg aaaaacctat ttgcttgatt
2821 accattccca atgtgtaaat tttgtatata tgtaaagttt cttaaactgt aaaatagcat
2881 tcttgtttta atacaaaaaa cattatattc aatact
//