LOCUS AJ276359 6699 bp mRNA linear HUM 21-OCT-2008
DEFINITION Homo sapiens mRNA for mucin 4 (MUC4 gene).
ACCESSION AJ276359
VERSION AJ276359.1
KEYWORDS MUC4 gene; mucin 4.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6699)
AUTHORS Choudhury A.K.
JOURNAL Submitted (16-MAR-2000) to the INSDC. Choudhury A.K., Dept.
Biochem. Mol. Biol., University of Nebraska Medical Center, 984525
Nebraska Medical Center, Omaha, NE, 68198-4525, USA.
REFERENCE 2
AUTHORS Choudhury A., Moniaux N., Winpenny J.P., Hollingsworth M.A.,
Aubert J.P., Batra S.K.
TITLE Human MUC4 mucin cDNA and its variants in pancreatic carcinoma
JOURNAL J. Biochem. 128(2), 233-243(2000).
PUBMED 10920259
FEATURES Location/Qualifiers
source 1..6699
/db_xref="H-InvDB:HIT000246330"
/organism="Homo sapiens"
/chromosome="3"
/map="q29"
/mol_type="mRNA"
/cell_line="pancreatic adenocarcinoma cell line HPAF"
/cell_type="ductal"
/db_xref="taxon:9606"
CDS 72..6581
/gene="MUC4"
/product="mucin 4"
/db_xref="GOA:Q99102"
/db_xref="H-InvDB:HIT000246330.12"
/db_xref="HGNC:HGNC:7514"
/db_xref="InterPro:IPR000742"
/db_xref="InterPro:IPR001846"
/db_xref="InterPro:IPR003886"
/db_xref="InterPro:IPR005533"
/db_xref="InterPro:IPR039898"
/db_xref="UniProtKB/Swiss-Prot:Q99102"
/protein_id="CAB81773.1"
/translation="MKGARWRRVPWVSLSCLCLCLLPHVVPGTTEDTLITGSKTPAPV
TSTGSTTATLEGQSTAASSRTSNQDISASSQNHQTKSTETTSKAQTDTLTQMMTSTLF
SSPSVHNVMETVTQETAPPDEMTTSFPSSVTNTLMMTSKTITMTTSTDSTLGNTEETS
TAGTESSTPVTSAVSITAGQEGQSRTTSWRTSIQDTSASSQNHWTRSTQTTRESQTST
LTHRTTSTPSFSPSVHNVTGTVSQKTSPSGETATSSLCSVTNTSMMTSEKITVTTSTG
STLGNPGETSSVPVTGSLMPVTSAALVTVDPEGQSPATFSRTSTQDTTAFSKNHQTQS
VETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVSQETFPSGETTISSPSSVSNTF
LVTSKVFRMPISRDSTLGNTEETSLSVSGTISAITSKVSTIWWSDTLSTALSPSSLPP
KISTAFHTQQSEGAETTGRPHERSSFSPGVSQEIFTLHETTTWPSSFSSKGHTTWSQT
ELPSTSTGAATRLVTGNPSTRAAGTIPRVPSKVSAIGEPGEPTTYSSHSTTLPKTTGA
GAQTQWTQETGTTGEALLSSPSYSVIQMIKTATSPSSSPMLDRHTSQQITTAPSTNHS
TIHSTSTSPQESPAVSQRGHTRAPQTTQESQTTRSVSPMTDTKTVTTPGSSFTASGHS
PSEIVPQDAPTISAATTFAPAPTGNGHTTQAPTTALQAAPSSHDATLGPSGGTSLSKT
GALTLANSVVSTPGGPEGQWTSASASTSPDTAAAMTHTHQAESTEASGQTQTSEPASS
GSRTTSAGTATPSSSGASGTTPSGSEGISTSGETTRFSSNPSRDSHTTQSTTELLSAS
ASHGAIPVSTGMASSIVPGTFHPTLSEASTAGRPTGQSSPTSPSASPQETAAISRMAQ
TQRTGTSRGSDTISLASQATDTFSTVPPTPPSITSSGLTSPQTQTHTLSPSGSGKTFT
TALISNATPLPVTSTSSASTGHATPLAVSSATSASTVSSDSPLKMETSGMTTPSLKTD
GGRRTATSPPPTTSQTIISTIPSTAMHTRSTAAPIPILPERGVSLFPYGADAGDLEFV
RRTVDFTSPLFKPATGFPLGSSLRDSLYFTDNGQIIFPESDYQIFSYPNPLPTGFTGR
DPVALVAPFWDDADFSTGRGTTFYQEYETFYGEHSLLVQQAESWIRKITNNGGYKARW
ALKVTWVNAHAYPAQWTLGSNTYQAILSTDGSRSYALFLYQSGGMQWDVAQRSGKPVL
MGFSSGDGFFENSPLMSQPVWERYRPDRFLNSNSGLQGLQFYGLHREERPNYRLECLQ
WLKSQPRWPSWGWNQVSCPCSWQQGRRDLRFQPVSIGRWGLGSRQLCSFTSWRGGVCC
SYGPWGEFREGWHVQRPWQLAQELEPQSWCCRWNDKPYLCALYQQRRPHVGCATYRPP
QPAWMFGDPHITTLDGVSYTFNGLGDFLLVGAQDGNSSFLLQGRTAQTGSAQATNFIA
FAAQYRSSSLGPVTVQWLLEPHDAIRVLLDNQTVTFQPDHEDGGGQETFNATGVLLSR
NGSEASASFDGWATVSVIALSNILHSSASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG
STIPPGSPEEMLFHFGMTWQINGTGLLGKRNDQLPSNFTPVFYSQLQKNSSWAEHLIS
NCDGDSSCIYDTLALRNASIGLHTREVSKNYEQANATLNQYPPSINGGRVIEAYKGQT
TLIQYTSNAEDANFTLRDSCTDLELFENGTLLWTPKSLEPFTLEILARSAKIGLASAL
QPRTVVCHCNAESQCLYNQTSRVGNSSLEVAGCKCDGGTFGRYCEGSEDACEEPCFPS
VHCVPGKGCEACPPNLTGDGRHCAALGSSFLCQNQSCPVNYCYNQGHCYISQTLGCQP
MCTCPPAFTDSRCFLAGNNFSPTVNLELPLRVIQLLLSEEENASMAEVNASVAYRLGT
LDMRAFLRNSQVERIDSAAPASGSPIQHWMVISEFQYRPRGPVIDFLNNQLLAAVVEA
FLYHVPRRSEEPRNDVVFQPISGEDVRDVTALNVSTLKAYFRCDGYKGYDLVYSPQSG
FTCVSPCSRGYCDHGGQCQHLPSGPRCSCVSFSIYTAWGEHCEHLSMKLDAFFGIFFG
ALGGLLLLGVGTFVVLRFWGCSGARFSYFLNSAEALP"
BASE COUNT 1617 a 2182 c 1605 g 1295 t
ORIGIN
1 gtctgctcct cacactgcag ctgctgggcc gtggagcttc cccgggagcc agggggactt
61 ttgccgcagc catgaagggg gcacgctgga ggagggtccc ctgggtgtcc ctgagctgcc
121 tgtgtctctg cctccttccg catgtggtcc caggaaccac agaggacaca ttaataactg
181 gaagtaaaac tcctgcccca gtcacctcaa caggctcaac aacagcgaca ctagagggac
241 aatcaactgc agcttcttca aggacctcta atcaggacat atcagcttca tctcagaacc
301 accagactaa gagcacggag accaccagca aagctcaaac cgacaccctc acgcagatga
361 tgacatcaac tcttttttct tccccaagtg tacacaatgt gatggagact gttacgcagg
421 agacagctcc tccagatgaa atgaccacat catttccctc cagtgtcacc aacacactca
481 tgatgacatc aaagactata acaatgacaa cctccacaga ctccactctt ggaaacacag
541 aagagacatc aacagcagga actgaaagtt ctaccccagt gacctcagca gtctcaataa
601 cagctggaca ggaaggacaa tcacgaacaa cttcctggag gacctctatc caagacacat
661 cagcttcttc tcagaaccac tggactcgga gcacgcagac caccagggaa tctcaaacca
721 gcaccctaac acacagaacc acttcaactc cttctttctc tccaagtgta cacaatgtga
781 cagggactgt ttctcagaag acatctcctt caggtgaaac agctacctca tccctctgta
841 gtgtcacaaa cacatccatg atgacatcag agaagataac agtgacaacc tccacaggct
901 ccactcttgg aaacccaggg gagacatcat cagtacctgt tactggaagt cttatgccag
961 tcacctcagc agccttagta acagttgatc cagaaggaca atcaccagca actttctcaa
1021 ggacttctac tcaggacaca acagcttttt ctaagaacca ccagactcag agcgtggaga
1081 ccaccagagt atctcaaatc aacaccctca acaccctcac accggttaca acatcaactg
1141 ttttatcctc accaagtgga ttcaacccaa gtggaacagt ttctcaggag acattccctt
1201 ctggtgaaac aaccatctca tccccttcca gtgtcagcaa tacattcctg gtaacatcaa
1261 aggtgttcag aatgccaatc tccagagact ctactcttgg aaacacagag gagacatcac
1321 tatctgtaag tggaaccatt tctgcaatca cttccaaagt ttcaaccata tggtggtcag
1381 acactctgtc aacagcactc tcccccagtt ctctacctcc aaaaatatcc acagctttcc
1441 acacccagca gagtgaaggt gcagagacca caggacggcc tcatgagagg agctcattct
1501 ctccaggtgt gtctcaagaa atatttactc tacatgaaac aacaacatgg ccttcctcat
1561 tctccagcaa aggccacaca acttggtcac aaacagaact gccctcaaca tcaacaggtg
1621 ctgccactag gcttgtcaca ggaaatccat ctacaagggc agctggcact attccaaggg
1681 tcccctctaa ggtctcagca ataggggaac caggagagcc caccacatac tcctcccaca
1741 gcacaactct cccaaaaaca acaggggcag gcgcccagac acaatggaca caagaaacgg
1801 ggaccactgg agaggctctt ctcagcagcc caagctatag tgtgattcag atgataaaaa
1861 cggccacatc cccatcttct tcacctatgc tggatagaca cacatcacaa caaattacaa
1921 cggcaccatc aacaaatcat tcaacaatac attccacaag cacctctcct caggaatcac
1981 cagctgtttc ccaaaggggt cacactcgag ccccgcagac cacacaagaa tcacaaacca
2041 cgaggtccgt ctcccccatg actgacacca agacagtcac caccccaggt tcttccttca
2101 cagccagtgg gcactcgccc tcagaaattg ttcctcagga cgcacccacc ataagtgcag
2161 caacaacctt tgccccagct cccaccggga atggtcacac aacccaggcc ccgaccacag
2221 cactgcaggc agcacccagc agccatgatg ccaccctggg gccctcagga ggcacgtcac
2281 tttccaaaac aggtgccctt actctggcca actctgtagt gtcaacacca gggggcccag
2341 aaggacaatg gacatcagcc tctgccagca cctcacctga cacagcagca gccatgaccc
2401 atacccacca ggctgagagc acagaggcct ctggacaaac acagaccagc gaaccggcct
2461 cctcagggtc acgaaccacc tcagcgggca cagctacccc ttcctcatcc ggggcgagtg
2521 gcacaacacc ttcaggaagc gaaggaatat ccacctcagg agagacgaca aggttttcat
2581 caaacccctc cagggacagt cacacaaccc agtcaacaac cgaattgctg tccgcctcag
2641 ccagtcatgg tgccatccca gtaagcacag gaatggcgtc ttcgatcgtc cccggcacct
2701 ttcatcccac cctctctgag gcctccactg cagggagacc gacaggacag tcaagcccaa
2761 cttctcccag tgcctctcct caggagacag ccgccatttc ccggatggcc cagactcaga
2821 ggacaggaac cagcagaggg tctgacacta tcagcctggc gtcccaggca accgacacct
2881 tctcaacagt cccacccaca cctccatcga tcacatccag tgggcttaca tctccacaaa
2941 cccagaccca cactctgtca ccttcagggt ctggtaaaac cttcaccacg gccctcatca
3001 gcaacgccac ccctcttcct gtcaccagca cctcctcagc ctccacaggt cacgccaccc
3061 ctcttgctgt cagcagtgct acctcagctt ccacagtatc ctcggactcc cctctgaaga
3121 tggaaacatc aggaatgaca acaccgtcac tgaagacaga cggtgggaga cgcacagcca
3181 catcaccacc ccccacaacc tcccagacca tcatttccac cattcccagc actgccatgc
3241 acacccgctc cacagctgcc cccatcccca tcctgcctga gagaggagtt tccctcttcc
3301 cctatggggc agacgccggg gacctggagt tcgtcaggag gaccgtggac ttcacctccc
3361 cactcttcaa gccggcgact ggcttccccc ttggctcctc tctccgtgat tccctctact
3421 tcacagacaa tggccagatc atcttcccag agtcagacta ccagattttc tcctacccca
3481 acccactccc aacaggcttc acaggccggg accctgtggc cctggtggct ccgttctggg
3541 acgatgctga cttctccact ggtcggggga ccacatttta tcaggaatac gagacgttct
3601 atggtgaaca cagcctgcta gtccagcagg ccgagtcttg gattagaaag atcacaaaca
3661 acgggggcta caaggccagg tgggccctaa aggtcacgtg ggtcaatgcc cacgcctatc
3721 ctgcccagtg gaccctcggg agcaacacct accaagccat cctctccacg gacgggagca
3781 ggtcctatgc cctgtttctc taccagagcg gtgggatgca gtgggacgtg gcccagcgct
3841 caggcaagcc ggtgctcatg ggcttctcta gtggagatgg ctttttcgaa aacagcccac
3901 tgatgtccca gccagtgtgg gagaggtatc gccctgatag attcctgaat tccaactcag
3961 gcctccaagg gctgcagttc tacgggctac accgggaaga aaggcccaac taccgtctcg
4021 agtgcctgca gtggctgaag agccagcctc ggtggcccag ctggggctgg aaccaggtct
4081 cctgcccttg ttcctggcag cagggacgac gggacttacg attccaaccc gtcagcatag
4141 gtcgctgggg cctcggcagt aggcagctgt gcagcttcac ctcttggcga ggaggcgtgt
4201 gctgcagcta cgggccctgg ggagagtttc gtgaaggctg gcacgtgcag cgtccttggc
4261 agttggccca ggaactggag ccacagagct ggtgctgccg ctggaatgac aagccctacc
4321 tctgtgccct gtaccagcag aggcggcccc acgtgggctg tgctacatac aggcccccac
4381 agcccgcctg gatgttcggg gacccccaca tcaccacctt ggatggtgtc agttacacct
4441 tcaatgggct gggggacttc ctgctggtcg gggcccaaga cgggaactcc tccttcctgc
4501 ttcagggccg caccgcccag actggctcag cccaggccac caacttcatc gcctttgcgg
4561 ctcagtaccg ctccagcagc ctgggccccg tcacggtcca atggctcctt gagcctcacg
4621 acgcaatccg tgtcctgctg gataaccaga ctgtgacatt tcagcctgac catgaagacg
4681 gcggaggcca ggagacgttc aacgccaccg gagtcctcct gagccgcaac ggctctgagg
4741 cctccgccag cttcgacggc tgggccaccg tctcggtgat cgcgctctcc aacatcctcc
4801 actcctccgc cagcctcccg cccgagtacc agaaccgcac ggaggggctc ctgggggtct
4861 ggaataacaa tccagaggac gacttcagga tgcccaatgg ctccaccatt cccccaggga
4921 gccctgagga gatgcttttc cactttggaa tgacctggca gatcaacggg acaggcctcc
4981 ttggcaagag gaatgaccag ctgccttcca acttcacccc tgttttctac tcacaactgc
5041 aaaaaaacag ctcctgggct gaacatttga tctccaactg tgacggagat agctcatgca
5101 tctatgacac cctggccctg cgcaacgcaa gcatcggact tcacacgagg gaagtcagta
5161 aaaactacga gcaggcgaac gccaccctca atcagtaccc gccctccatc aatggtggtc
5221 gtgtgattga agcctacaag gggcagacca cgctgattca gtacaccagc aatgctgagg
5281 atgccaactt cacgctcaga gacagctgca ccgacttgga gctctttgag aatgggacgt
5341 tgctgtggac acccaagtcg ctggagccat tcactctgga gattctagca agaagtgcca
5401 agattggctt ggcatctgca ctccagccca ggactgtggt ctgccattgc aatgcagaga
5461 gccagtgttt gtacaatcag accagcaggg tgggcaactc ctccctggag gtggctggct
5521 gcaagtgtga cgggggcacc ttcggccgct actgcgaggg ctccgaggat gcctgtgagg
5581 agccgtgctt cccgagtgtc cactgcgttc ctgggaaggg ctgcgaggcc tgccctccaa
5641 acctgactgg ggatgggcgg cactgtgcgg ctctggggag ctctttcctg tgtcagaacc
5701 agtcctgccc tgtgaattac tgctacaatc aaggccactg ctacatctcc cagactctgg
5761 gctgtcagcc catgtgcacc tgccccccag ccttcactga cagccgctgc ttcctggctg
5821 ggaacaactt cagtccaact gtcaacctag aacttccctt aagagtcatc cagctcttgc
5881 tcagtgaaga ggaaaatgcc tccatggcag aggtcaacgc ctcggtggca tacagactgg
5941 ggaccctgga catgcgggcc tttctccgca acagccaagt ggaacgaatc gattctgcag
6001 caccggcctc gggaagcccc atccaacact ggatggtcat ctcggagttc cagtaccgcc
6061 ctcggggccc ggtcattgac ttcctgaaca accagctgct ggccgcggtg gtggaggcgt
6121 tcttatacca cgttccacgg aggagtgagg agcccaggaa cgacgtggtc ttccagccca
6181 tttccgggga agacgtgcgc gatgtgacag ccctgaacgt gagcacgctg aaggcttact
6241 tcagatgcga tggctacaag ggctacgacc tggtctacag cccccagagc ggcttcacct
6301 gcgtgtcccc gtgcagtagg ggctactgtg accatggagg ccagtgccag cacctgccca
6361 gtgggccccg ctgcagctgt gtgtccttct ccatctacac ggcctggggc gagcactgtg
6421 agcacctgag catgaaactc gacgcgttct tcggcatctt ctttggggcc ctgggcggcc
6481 tcttgctgct gggggtcggg acgttcgtgg tcctgcgctt ctggggttgc tccggggcca
6541 ggttctccta tttcctgaac tcagctgagg ccttgccttg aaggggcagc tgtggcctag
6601 gctacctcaa gactcacctc atccttaccg cacatttaag gcgccattgc ttttgggaga
6661 ctggaaaagg gaaggtgact gaaggctgtc aggattctt
//