LOCUS AJ276171 2681 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens mRNA for ASPIC (acidic secreted protein in cartilage) (ASPIC1 gene). ACCESSION AJ276171 VERSION AJ276171.1 KEYWORDS acidic secreted protein in cartilage; ASPIC1 gene. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2681) AUTHORS Bolton M.C. JOURNAL Submitted (17-JUL-2000) to the INSDC. Bolton M.C., Cell signalling, Kennedy Institute of Rheumatology, 1 Aspenlea Road, Hammersmith, London W6 8LH, UNITED KINGDOM. REFERENCE 2 AUTHORS Bolton M.C., Wait R., Saklatvala J. TITLE Cloning of ASPIC, a novel protein secreted by human normal and osteoarthritic cartilage, identified by 2D electrophoresis and mass spectrometry JOURNAL Unpublished. FEATURES Location/Qualifiers source 1..2681 /db_xref="H-InvDB:HIT000246286" /organism="Homo sapiens" /mol_type="mRNA" /cell_type="chondrocyte" /tissue_type="cartilage" /db_xref="taxon:9606" 5'UTR 1..149 /gene="ASPIC1" /note="A second transcription start site at +31" /experiment="experimental evidence, no additional details recorded" CDS 150..2135 /gene="ASPIC1" /standard_name="acidic secreted protein in cartilage" /product="ASPIC" /db_xref="GOA:Q9NQ79" /db_xref="H-InvDB:HIT000246286.14" /db_xref="HGNC:HGNC:14882" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR011519" /db_xref="InterPro:IPR018097" /db_xref="InterPro:IPR027039" /db_xref="UniProtKB/Swiss-Prot:Q9NQ79" /experiment="experimental evidence, no additional details recorded" /protein_id="CAB98267.1" /translation="MAPSADPGMSRMLPFLLLLWFLPITEGSQRAEPMFTAVTNSVLP PDYDSNPTQLNYGVAVTDVDHDGDFEIVVAGYNGPNLVLKYDRAQKRLVNIAVDERSS PYYALRDRQGNAIGVTACDIDGDGREEIYFLNTNNAFSGVATYTDKLFKFRNNRWEDI LSDEVNVARGVASLFAGRSVACVDRKGSGRYSIYIANYAYGNVGPDALIEMDPEASDL SRGILALRDVAAEAGVSKYTGGRGVSVGPILSSSASDIFCDNENGPNFLFHNRGDGTF VDAAASAGVDDPHQHGRGVALADFNRDGKVDIVYGNWNGPHRLYLQMSTHGKVRFRDI ASPKFSMPSPVRTVITADFDNDQELEIFFNNIAYRSSSANRLFRVIRREHGDPLIEEL NPGDALEPEGRGTGGVVTDFDGDGMLDLILSHGESMAQPLSVFRGNQGFNNNWLRVVP RTRFGAFARGAKVVLYTKKSGAHLRIIDGGSGYLCEMEPVAHFGLGKDEASSVEVTWP DGKMVSRNVASGEMNSVLEILYPRDEDTLQDPAPLECGQGFSQQENGHCMDTNECIQF PFVCPRDKPVCVNTYGSYRCRTNKKCSRGYEPNEDGTACVGTLGQSPGPRPTTPTAAA ATAAAAAAAGAATAAPVLVDGDLNLGSVVKESCEPSC" sig_peptide 150..230 /gene="ASPIC1" CDS 174..2135 /gene="ASPIC1" /standard_name="acidic secreted protein in cartilage" /product="ASPIC" /note="putative alternative start, less identity to the Kozak rule" /db_xref="GOA:Q9NQ79" /db_xref="HGNC:HGNC:14882" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR011519" /db_xref="InterPro:IPR018097" /db_xref="InterPro:IPR027039" /db_xref="UniProtKB/Swiss-Prot:Q9NQ79" /experiment="experimental evidence, no additional details recorded" /protein_id="CAB98268.1" /translation="MSRMLPFLLLLWFLPITEGSQRAEPMFTAVTNSVLPPDYDSNPT QLNYGVAVTDVDHDGDFEIVVAGYNGPNLVLKYDRAQKRLVNIAVDERSSPYYALRDR QGNAIGVTACDIDGDGREEIYFLNTNNAFSGVATYTDKLFKFRNNRWEDILSDEVNVA RGVASLFAGRSVACVDRKGSGRYSIYIANYAYGNVGPDALIEMDPEASDLSRGILALR DVAAEAGVSKYTGGRGVSVGPILSSSASDIFCDNENGPNFLFHNRGDGTFVDAAASAG VDDPHQHGRGVALADFNRDGKVDIVYGNWNGPHRLYLQMSTHGKVRFRDIASPKFSMP SPVRTVITADFDNDQELEIFFNNIAYRSSSANRLFRVIRREHGDPLIEELNPGDALEP EGRGTGGVVTDFDGDGMLDLILSHGESMAQPLSVFRGNQGFNNNWLRVVPRTRFGAFA RGAKVVLYTKKSGAHLRIIDGGSGYLCEMEPVAHFGLGKDEASSVEVTWPDGKMVSRN VASGEMNSVLEILYPRDEDTLQDPAPLECGQGFSQQENGHCMDTNECIQFPFVCPRDK PVCVNTYGSYRCRTNKKCSRGYEPNEDGTACVGTLGQSPGPRPTTPTAAAATAAAAAA AGAATAAPVLVDGDLNLGSVVKESCEPSC" sig_peptide 174..230 /gene="ASPIC1" /note="putative alternative start, less identity to the Kozak rule" CDS 183..2135 /gene="ASPIC1" /standard_name="acidic secreted protein in cartilage" /product="ASPIC" /note="putative alternative start, less identity to the Kozak rule" /db_xref="GOA:Q9NQ79" /db_xref="HGNC:HGNC:14882" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR011519" /db_xref="InterPro:IPR018097" /db_xref="InterPro:IPR027039" /db_xref="UniProtKB/Swiss-Prot:Q9NQ79" /experiment="experimental evidence, no additional details recorded" /protein_id="CAB98269.1" /translation="MLPFLLLLWFLPITEGSQRAEPMFTAVTNSVLPPDYDSNPTQLN YGVAVTDVDHDGDFEIVVAGYNGPNLVLKYDRAQKRLVNIAVDERSSPYYALRDRQGN AIGVTACDIDGDGREEIYFLNTNNAFSGVATYTDKLFKFRNNRWEDILSDEVNVARGV ASLFAGRSVACVDRKGSGRYSIYIANYAYGNVGPDALIEMDPEASDLSRGILALRDVA AEAGVSKYTGGRGVSVGPILSSSASDIFCDNENGPNFLFHNRGDGTFVDAAASAGVDD PHQHGRGVALADFNRDGKVDIVYGNWNGPHRLYLQMSTHGKVRFRDIASPKFSMPSPV RTVITADFDNDQELEIFFNNIAYRSSSANRLFRVIRREHGDPLIEELNPGDALEPEGR GTGGVVTDFDGDGMLDLILSHGESMAQPLSVFRGNQGFNNNWLRVVPRTRFGAFARGA KVVLYTKKSGAHLRIIDGGSGYLCEMEPVAHFGLGKDEASSVEVTWPDGKMVSRNVAS GEMNSVLEILYPRDEDTLQDPAPLECGQGFSQQENGHCMDTNECIQFPFVCPRDKPVC VNTYGSYRCRTNKKCSRGYEPNEDGTACVGTLGQSPGPRPTTPTAAAATAAAAAAAGA ATAAPVLVDGDLNLGSVVKESCEPSC" sig_peptide 183..230 /gene="ASPIC1" /note="putative alternative start, less identity to the Kozak rule" mat_peptide 231..2132 /gene="ASPIC1" /standard_name="acidic secreted protein in cartilage" /product="ASPIC" 3'UTR 2136..2681 /gene="ASPIC1" regulatory 2642..2647 /gene="ASPIC1" /regulatory_class="polyA_signal_sequence" BASE COUNT 571 a 767 c 826 g 517 t ORIGIN 1 gtataaagcg agcgcgcggc gtcggggcgg gaggctcgag gccagcccgg gaccggggct 61 gggagcaagc aggcggcggc gccggcggca gaggcggcag cgagcgcccg cttcccacgc 121 ccctaggcgg cggggccgag agcgggagga tggctccgag cgctgacccc ggcatgtcca 181 ggatgttacc gttcctgctg ctgctctggt ttctgcccat cactgagggg tcccagcggg 241 ctgaacccat gttcactgca gtcaccaact cagttctgcc tcctgactat gacagtaatc 301 ccacccagct caactatggt gtggcagtta ctgatgtgga ccatgatggg gactttgaga 361 tcgtcgtggc ggggtacaat ggacccaacc tggttctgaa gtatgaccgg gcccagaagc 421 ggctggtgaa catcgcggtc gatgagcgca gctcacccta ctacgcgctg cgggaccggc 481 aggggaacgc catcggggtc acagcctgcg acatcgacgg ggacggccgg gaggagatct 541 acttcctcaa caccaataat gccttctcgg gggtggccac gtacaccgac aagttgttca 601 agttccgcaa taaccggtgg gaagacatcc tgagcgatga ggtcaacgtg gcccgtggtg 661 tggccagcct ctttgccgga cgctctgtgg cctgtgtgga cagaaagggc tctggacgct 721 actctatcta cattgccaat tacgcctacg gtaatgtggg ccctgatgcc ctcattgaaa 781 tggaccctga ggccagtgac ctctcccggg gcattctggc gctcagagat gtggctgctg 841 aggctggggt cagcaaatat acagggggcc gaggcgtcag cgtgggcccc atcctcagca 901 gcagtgcctc ggatatcttc tgcgacaatg agaatgggcc taacttcctt ttccacaacc 961 ggggcgatgg cacctttgtg gacgctgcgg ccagtgctgg tgtggacgac ccccaccagc 1021 atgggcgagg tgtcgccctg gctgacttca accgtgatgg caaagtggac atcgtctatg 1081 gcaactggaa tggcccccac cgcctctatc tgcaaatgag cacccatggg aaggtccgct 1141 tccgggacat cgcctcaccc aagttctcca tgccctcccc tgtccgcacg gtcatcaccg 1201 ccgactttga caatgaccag gagctggaga tcttcttcaa caacattgcc taccgcagct 1261 cctcagccaa ccgcctcttc cgcgtcatcc gtagagagca cggagacccc ctcatcgagg 1321 agctcaatcc cggcgacgcc ttggagcctg agggccgggg cacagggggt gtggtgaccg 1381 acttcgacgg agacgggatg ctggacctca tcttgtccca tggagagtcc atggctcagc 1441 cgctgtccgt cttccggggc aatcagggct tcaacaacaa ctggctgcga gtggtgccac 1501 gcacccggtt tggggccttt gccaggggag ctaaggtcgt gctctacacc aagaagagtg 1561 gggcccacct gaggatcatc gacgggggct caggctacct gtgtgagatg gagcccgtgg 1621 cacactttgg cctggggaag gatgaagcca gcagtgtgga ggtgacgtgg ccagatggca 1681 agatggtgag ccggaacgtg gccagcgggg agatgaactc agtgctggag atcctctacc 1741 cccgggatga ggacacactt caggacccag ccccactgga gtgtggccaa ggattctccc 1801 agcaggaaaa tggccattgc atggacacca atgaatgcat ccagttccca ttcgtgtgcc 1861 ctcgagacaa gcccgtatgt gtcaacacct atggaagcta caggtgccgg accaacaaga 1921 agtgcagtcg gggctacgag cccaacgagg atggcacagc ctgcgtgggg actctcggcc 1981 agtcaccggg cccccgcccc accaccccca ccgctgctgc tgccactgcc gctgctgctg 2041 ccgctgctgg agctgccact gctgcaccgg tcctcgtaga tggagatctc aatctggggt 2101 cggtggttaa ggagagctgc gagcccagct gctgagcagg ggtgggacat gaaccagcgg 2161 atggagtcca gcaggggagt gggaaagtgg gcttgtgctg ctgcctagac agtagggatg 2221 taaaggcctg ggagctagac cctccccaag cccatccatg cacattactt agctaacaat 2281 tagggagact cgtaaggcca ggccctgtgc tgggcacata gctgtgatca cagcagacag 2341 ggtcgctgcc ctgatggcgc ttacattcca gtgggtctaa tgaccatatc ttaggacaca 2401 gatgtgccca gggaggtggt gtcactgcac aggaagtatg aggactttag tgtcctgagt 2461 tcaaatcctg attcaggaac tcacaaagct atgtgacctt acaccagtca cttaacttgt 2521 tagccatcca ttatcgcatc tgcaaaatgg ggattaagaa tagaatcttg gggttagtgt 2581 ggagattaga ttaaatgtat gtaagacact tggcacaaaa cctggcacat agtaaaggct 2641 caataaaaac aagtgcctct cactgggctt tgtcaacacg t //