LOCUS AJ270996 3919 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens partial mRNA for LTRPC5 protein (LTRPC5 gene).
ACCESSION AJ270996
VERSION AJ270996.1
KEYWORDS Ltrpc5 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3919)
AUTHORS Stroedicke M.
JOURNAL Submitted (14-JAN-2000) to the INSDC. Stroedicke M., Dep. Trautner,
Max-Planck-Institut fuer Molekulare Genetik, Ihnestrasse 73, 14195
Berlin, GERMANY.
REFERENCE 2
AUTHORS Paulsen M., El-Maarri O., Engemann S., Franck O., Stroedicke M.,
Davies K.R., Bowden L.M., Reinhardt R., Reik W., Harteneck C.,
Walter J.
TITLE Comparative sequence analysis and characterization of the
imprinting cluster on the human chromosome 11p15.5 and distal mouse
chromosome 7
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..3919
/db_xref="H-InvDB:HIT000246158"
/organism="Homo sapiens"
/chromosome="11"
/map="11p15.5"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS <1..3480
/codon_start=1
/gene="LTRPC5"
/product="LTRPC5 protein"
/function="TRP channel"
/db_xref="GOA:Q9NZQ8"
/db_xref="H-InvDB:HIT000246158.12"
/db_xref="HGNC:HGNC:14323"
/db_xref="InterPro:IPR005821"
/db_xref="InterPro:IPR029577"
/db_xref="InterPro:IPR041491"
/db_xref="UniProtKB/Swiss-Prot:Q9NZQ8"
/protein_id="CAB66342.1"
/translation="PGSPGDAEDRRELGLHRGEVNFGGSGKKRGKFVRVPSGVAPSVL
FDLLLAEWHLPAPNLVVSLVGEEQPFAMKSWLRDVLRKGLVKAAQSTGAWILTSALRV
GLARHVGQAVRDHSLASTSTKVRVVAVGMASLGRVLHRRILEEAQVHEDFPVHYPEDD
GGSQGPLCSLDSNLSHFILVEPGPPGKGDGLTELRLRLEKHISEQRAGYGGTGSIEIP
VLCLLVNGDPNTLERISRAVEQAAPWLILVGSGGIADVLAALVNQPHLLVPKVAEKQF
KEKFPSKHFSWEDIVRWTKLLQNITSHQHLLTVYDFEQEGSEELDTVILKALVKACKS
HSQEPQDYLDELKLAVAWDRVDIAKSEIFNGDVEWKSCDLEEVMVDALVSNKPEFVRL
FVDNGADVADFLTYGRLQELYRSVSRKSLLFDLLQRKQEEARLTLAGLGTQQAREPPA
GPPAFSLHEVSRVLKDFLQDACRGFYQDGRPGDRRRAEKGPAKRPTGQKWLLDLNQKS
ENPWRDLFLWAVLQNRHEMATYFWAMGQEGVAAALAACKILKEMSHLETEAEAARATR
EAKYERLALDLFSECYSNSEARAFALLVRRNRCWSKTTCLHLATEADAKAFFAHDGVQ
AFLTRIWWGDMAAGTPILRLLGAFLCPALVYTNLITFSEEAPLRTGLEDLQDLDSLDT
EKSPLYGLQSRVEELVEAPRAQGDRGPRAVFLLTRWRKFWGAPVTVFLGNVVMYFAFL
FLFTYVLLVDFRPPPQGPSGPEVTLYFWVFTLVLEEIRQGFFTDEDTHLVKKFTLYVG
DNWNKCDMVAIFLFIVGVTCRMLPSAFEAGRTVLAMDFMVFTLRLIHIFAIHKQLGPK
IIVVERMMKDVFFFLFFLSVWLVAYGVTTQALLHPHDGRLEWIFRRVLYRPYLQIFGQ
IPLDEIDEARVNCSTHPLLLEDSPSCPSLYANWLVILLLVTFLLVTNVLLMNLLIAMF
SYTFQVVQGNADMFWKFQRYNLIVEYHERPALAPPFILLSHLSLTLRRVFKKEAEHKR
EHLERDLPDPLDQKVVTWETVQKENFLSKMEKRRRDSEGEVLRKTAHRVDFIAKYLGG
LREQEKRIKCLESQINYCSVLVSSVADVLAQGGGPRSSQHCGEGSQLVAADHRGGLDG
WEQPGAGQPPSDT"
BASE COUNT 724 a 1246 c 1243 g 706 t
ORIGIN
1 cccggaagcc ccggggatgc tgaagaccgg cgggagctgg gcttgcacag gggcgaggtc
61 aactttggag ggtctgggaa gaagcgaggc aagtttgtac gggtgccgag cggagtggcc
121 ccgtctgtgc tctttgacct gctgcttgct gagtggcacc tgccggcccc caacctggtg
181 gtgtccctgg tgggtgagga gcagcctttc gccatgaagt cctggctgcg ggatgtgctg
241 cgcaaggggc tggtgaaggc ggctcagagc acaggagcct ggatcctgac cagtgccctc
301 cgcgtgggcc tggccaggca tgtcgggcag gccgtgcgcg accactcgct ggccagcacg
361 tccaccaagg tccgtgtggt tgctgtcggc atggcctcgc tgggccgcgt cctgcaccgc
421 cgcattctgg aggaggccca ggtgcacgag gattttcctg tccactaccc tgaggatgac
481 ggcggcagcc agggccccct ctgttcactg gacagcaacc tctcccactt catcctggtg
541 gagccaggcc ccccggggaa gggcgatggg ctgacggagc tgcggctgag gctggagaag
601 cacatctcgg agcagagggc gggctacggg ggcactggca gcatcgagat ccctgtcctc
661 tgcttgctgg tcaatggtga tcccaacacc ttggagagga tctccagggc cgtggagcag
721 gctgccccgt ggctgatcct ggtaggctcg gggggcatcg ccgatgtgct tgctgcccta
781 gtgaaccagc cccacctcct ggtgcccaag gtggccgaga agcagtttaa ggagaagttc
841 cccagcaagc atttctcttg ggaggacatc gtgcgctgga ccaagctgct gcagaacatc
901 acctcacacc agcacctgct caccgtgtat gacttcgagc aggagggctc cgaggagctg
961 gacacggtca tcctgaaggc gctggtgaaa gcctgcaaga gccacagcca ggagcctcag
1021 gactatctgg atgagctcaa gctggccgtg gcctgggacc gcgtggacat cgccaagagt
1081 gagatcttca atggggacgt ggagtggaag tcctgtgacc tggaggaggt gatggtggac
1141 gccctggtca gcaacaagcc cgagtttgtg cgcctctttg tggacaacgg cgcagacgtg
1201 gccgacttcc tgacgtatgg gcggctgcag gagctctacc gctccgtgtc acgcaagagc
1261 ctgctcttcg acctgctgca gcggaagcag gaggaggccc ggctgacgct ggccggcctg
1321 ggcacccagc aggcccggga gccacccgcg gggccaccgg ccttctccct gcacgaggtc
1381 tcccgcgtac tcaaggactt cctgcaggac gcctgccgag gcttctacca ggacggccgg
1441 ccaggggacc gcaggagggc ggagaagggc ccggccaagc ggcccacggg ccagaagtgg
1501 ctgctggacc tgaaccagaa gagcgagaac ccctggcggg acctgttcct gtgggccgtg
1561 ctgcagaacc gccacgagat ggccacctac ttctgggcca tgggccagga aggtgtggca
1621 gccgcactgg ccgcctgcaa aatcctcaaa gagatgtcgc acctggagac ggaggccgag
1681 gcggcccgag ccacgcgcga ggcgaaatac gagcggctgg cccttgacct cttctccgag
1741 tgctacagca acagtgaggc ccgcgccttc gccctgctgg tgcgccggaa ccgctgctgg
1801 agcaagacca cctgcctgca cctggccacc gaggctgacg ccaaggcctt ctttgcccac
1861 gacggcgttc aggccttcct gaccaggatc tggtgggggg acatggccgc aggcacgccc
1921 atcctgcggc tgctaggagc cttcctctgc cccgccctcg tctataccaa cctcatcacc
1981 ttcagtgagg aagctcccct gaggacaggc ctggaggacc tgcaggacct ggacagcctg
2041 gacacggaga agagcccgct gtatggcctg cagagccggg tggaggagct ggtggaggcg
2101 ccgagggctc agggtgaccg aggcccacgt gctgtcttcc tgctcacacg ctggcggaaa
2161 ttctggggcg ctcccgtgac tgtgttcctg gggaacgtgg tcatgtactt cgccttcctc
2221 ttcctgttca cctacgtcct gctggtggac ttcaggccgc ccccccaggg cccctcaggg
2281 cccgaggtca ccctctactt ctgggtcttt acgctggtgc tggaggaaat ccggcagggc
2341 ttcttcacag acgaggacac acacctggtg aagaagttca cactgtatgt gggggacaac
2401 tggaacaagt gtgacatggt ggccatcttc ctgttcatcg tgggtgtcac ctgcaggatg
2461 ctgccgtcgg cgtttgaggc tggccgcaca gtcctcgcca tggacttcat ggtgttcacg
2521 ctgcggctga tccatatctt tgccatacac aagcagctgg gccccaagat catcgtggta
2581 gagcgcatga tgaaggacgt cttcttcttc ctcttctttc tgagcgtgtg gctcgtggcc
2641 tacggtgtca ccacccaggc gctgctgcac ccccatgacg gccgcctgga gtggatcttc
2701 cgccgggtgc tctaccggcc ctacctgcag atcttcggcc agatcccact ggacgagatt
2761 gatgaagccc gtgtgaactg ctccacccac ccactgctgc tggaggactc accatcctgc
2821 cccagcctct atgccaactg gctggtcatc ctcctgctgg tcaccttcct gttggtcacc
2881 aatgtgctgc tcatgaacct gctcatcgcc atgttcagct acacgttcca ggtggtgcag
2941 ggcaacgcag acatgttctg gaagttccag cgctacaacc tgattgtgga gtaccacgag
3001 cgccccgccc tggccccgcc cttcatcctg ctcagccacc tgagcctgac gctccgccgg
3061 gtcttcaaga aggaggctga gcacaagcgg gagcacctgg agagagacct gccagacccc
3121 ctggaccaga aggtcgtcac ctgggagaca gtccagaagg agaacttcct gagcaagatg
3181 gagaagcgga ggagggacag cgagggggag gtgctgcgga aaaccgccca cagagtggac
3241 ttcattgcca agtacctcgg gggtctgaga gagcaagaaa agcgcatcaa gtgtctggag
3301 tcacagatca actactgctc ggtgctcgtg tcctccgtgg ctgacgtgct ggcccagggt
3361 ggcggccccc ggagctctca gcactgtggc gagggaagcc agctggtggc tgctgaccac
3421 agaggtggtt tagatggctg ggaacaaccc ggggctggcc agcctccctc ggacacctga
3481 gctgcttggc ctgccacgtg tggggccacc tctcctcagc tggccaccct gcacgttgtg
3541 cactgacctt tgccgacctc cagcggaacc ccccaggggg caccagcccc ccagcagaca
3601 atggccctcc tggtgcctca ccacagaccc tcacccaaag gaaccgctcc ttgtccctcc
3661 tggcctcccc ggaggcacag cagtgtcatg gggctgtctc ccctgacagg cacaactccc
3721 cgggcagaaa acgtgcccca ccgcatccct acctggaaac tgaccagcct gcactgtgga
3781 aaagctggcc ctgtggcgtg acgggggagc acccccatcc agactgcgaa gctgctctgg
3841 ggtctgcacc cacccctgcc ctgacttgtg ttgcctgaca agagactcat ctttttttga
3901 aaaaaaaaaa aaaaaaaaa
//